RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 FAM53AQ6NSI3 398 aaPredicted RBP14.58□□□□□ -0.08
CPSF4-205ENST00000440514 TRAT1Q6PIZ9 186 aa14.58□□□□□ -0.08
CPSF4-205ENST00000440514 PRR18Q8N4B5 295 aa14.58□□□□□ -0.08
CPSF4-205ENST00000440514 FAM89BQ8N5H3 189 aa14.58□□□□□ -0.08
CPSF4-205ENST00000440514 OR5R1Q8NH85 324 aa14.58□□□□□ -0.08
CPSF4-205ENST00000440514 ZNF596Q8TC21 504 aa14.58□□□□□ -0.08
CPSF4-205ENST00000440514 PTX4Q96A99 478 aa14.58□□□□□ -0.08
CPSF4-205ENST00000440514 MALSU1Q96EH3 234 aa14.58□□□□□ -0.08
CPSF4-205ENST00000440514 PLEKHJ1Q9NW61 149 aa14.58□□□□□ -0.08
CPSF4-205ENST00000440514 METTL21EPA6NDL7 271 aa14.57□□□□□ -0.08
CPSF4-205ENST00000440514 SDCBPO00560 298 aaPredicted RBP14.57□□□□□ -0.08
CPSF4-205ENST00000440514 TOR1AO14656 332 aa14.57□□□□□ -0.08
CPSF4-205ENST00000440514 AIREO43918 545 aa14.57□□□□□ -0.08
CPSF4-205ENST00000440514 SCGNO76038 276 aa14.57□□□□□ -0.08
CPSF4-205ENST00000440514 TMEM30BQ3MIR4 351 aa14.57□□□□□ -0.08
CPSF4-205ENST00000440514 SFXN4Q6P4A7 337 aa14.57□□□□□ -0.08
CPSF4-205ENST00000440514 Q6ZPA2 131 aa14.57□□□□□ -0.08
CPSF4-205ENST00000440514 C5orf24Q7Z6I8 188 aa14.57□□□□□ -0.08
CPSF4-205ENST00000440514 OR10A7Q8NGE5 316 aa14.57□□□□□ -0.08
CPSF4-205ENST00000440514 OR9G1Q8NH87 305 aa14.57□□□□□ -0.08
CPSF4-205ENST00000440514 OR1L1Q8NH94 360 aa14.57□□□□□ -0.08
CPSF4-205ENST00000440514 ARHGAP5-AS1Q96IT6 56 aa14.57□□□□□ -0.08
CPSF4-205ENST00000440514 HDHD3Q9BSH5 251 aaPredicted RBP14.57□□□□□ -0.08
CPSF4-205ENST00000440514 RIMS4Q9H426 269 aaPredicted RBP14.57□□□□□ -0.08
CPSF4-205ENST00000440514 AK3Q9UIJ7 227 aa14.57□□□□□ -0.08
CPSF4-205ENST00000440514 DAPK2Q9UIK4 370 aa14.57□□□□□ -0.08
CPSF4-205ENST00000440514 RAB22AQ9UL26 194 aa14.57□□□□□ -0.08
CPSF4-205ENST00000440514 PSG11Q9UQ72 335 aa14.57□□□□□ -0.08
CPSF4-205ENST00000440514 A0A1W2PPE3 182 aa14.56□□□□□ -0.08
CPSF4-205ENST00000440514 HBZP02008 142 aa14.56□□□□□ -0.08
CPSF4-205ENST00000440514 RAB13P51153 203 aa14.56□□□□□ -0.08
CPSF4-205ENST00000440514 TMEM50BP56557 158 aa14.56□□□□□ -0.08
CPSF4-205ENST00000440514 LSM3P62310 102 aaKnown RBP14.56□□□□□ -0.08
CPSF4-205ENST00000440514 RELBQ01201 579 aa14.56□□□□□ -0.08
CPSF4-205ENST00000440514 AANATQ16613 207 aa14.56□□□□□ -0.08
CPSF4-205ENST00000440514 MOGAT2Q3SYC2 334 aa14.56□□□□□ -0.08
CPSF4-205ENST00000440514 PLAC9Q5JTB6 97 aa14.56□□□□□ -0.08
CPSF4-205ENST00000440514 OR56B1Q8NGI3 324 aa14.56□□□□□ -0.08
CPSF4-205ENST00000440514 PIFOQ8TCI5 191 aa14.56□□□□□ -0.08
CPSF4-205ENST00000440514 CREB3L1Q96BA8 519 aa14.56□□□□□ -0.08
CPSF4-205ENST00000440514 PECRQ9BY49 303 aa14.56□□□□□ -0.08
CPSF4-205ENST00000440514 MMP28Q9H239 520 aa14.56□□□□□ -0.08
CPSF4-205ENST00000440514 TAF9BQ9HBM6 251 aa14.56□□□□□ -0.08
CPSF4-205ENST00000440514 CHMP1AQ9HD42 196 aaPredicted RBP14.56□□□□□ -0.08
CPSF4-205ENST00000440514 MBNL3Q9NUK0 354 aaKnown RBP14.56□□□□□ -0.08
CPSF4-205ENST00000440514 C1RLQ9NZP8 487 aa14.56□□□□□ -0.08
CPSF4-205ENST00000440514 DPM3Q9P2X0 92 aa14.56□□□□□ -0.08
CPSF4-205ENST00000440514 VGLL3A8MV65 326 aa14.55□□□□□ -0.08
CPSF4-205ENST00000440514 BUB1B-PAK6H3BSN5 160 aa14.55□□□□□ -0.08
CPSF4-205ENST00000440514 J3QR06 171 aa14.55□□□□□ -0.08
CPSF4-205ENST00000440514 F2RL2O00254 374 aa14.55□□□□□ -0.08
CPSF4-205ENST00000440514 SPINT2O43291 252 aa14.55□□□□□ -0.08
CPSF4-205ENST00000440514 CRYBA1P05813 215 aa14.55□□□□□ -0.08
CPSF4-205ENST00000440514 SNRPBP14678 240 aaKnown RBP14.55□□□□□ -0.08
CPSF4-205ENST00000440514 RAB6AP20340 208 aa14.55□□□□□ -0.08
CPSF4-205ENST00000440514 PRRX1P54821 245 aa14.55□□□□□ -0.08
CPSF4-205ENST00000440514 LOXL3P58215 753 aa14.55□□□□□ -0.08
CPSF4-205ENST00000440514 AWAT1Q58HT5 328 aa14.55□□□□□ -0.08
CPSF4-205ENST00000440514 TPTE2P1Q5T6R2 138 aa14.55□□□□□ -0.08
CPSF4-205ENST00000440514 OLFML2AQ68BL7 652 aa14.55□□□□□ -0.08
CPSF4-205ENST00000440514 C12orf54Q6X4T0 127 aa14.55□□□□□ -0.08
CPSF4-205ENST00000440514 SLC16A12Q6ZSM3 486 aa14.55□□□□□ -0.08
CPSF4-205ENST00000440514 ZNF554Q86TJ5 538 aa14.55□□□□□ -0.08
CPSF4-205ENST00000440514 SETD6Q8TBK2 473 aa14.55□□□□□ -0.08
CPSF4-205ENST00000440514 LGALS14Q8TCE9 139 aa14.55□□□□□ -0.08
CPSF4-205ENST00000440514 ABCB10Q9NRK6 738 aa14.55□□□□□ -0.08
CPSF4-205ENST00000440514 GFOD1Q9NXC2 390 aa14.55□□□□□ -0.08
CPSF4-205ENST00000440514 HSF4Q9ULV5 492 aa14.55□□□□□ -0.08
CPSF4-205ENST00000440514 STAB1Q9NY15 2570 aa14.55□□□□□ -0.08
CPSF4-205ENST00000440514 LEUTXA8MZ59 168 aa14.54□□□□□ -0.08
CPSF4-205ENST00000440514 NAPSAO96009 420 aa14.54□□□□□ -0.08
CPSF4-205ENST00000440514 COMPP49747 757 aaPredicted RBP14.54□□□□□ -0.08
CPSF4-205ENST00000440514 RAG2P55895 527 aa14.54□□□□□ -0.08
CPSF4-205ENST00000440514 DHRS7BQ6IAN0 325 aaPredicted RBP14.54□□□□□ -0.08
CPSF4-205ENST00000440514 Q6ZTK2 550 aa14.54□□□□□ -0.08
CPSF4-205ENST00000440514 OR10V1Q8NGI7 309 aa14.54□□□□□ -0.08
CPSF4-205ENST00000440514 OR52M1Q8NGK5 317 aa14.54□□□□□ -0.08
CPSF4-205ENST00000440514 OR13F1Q8NGS4 319 aa14.54□□□□□ -0.08
CPSF4-205ENST00000440514 KCNIP1Q9NZI2 227 aa14.54□□□□□ -0.08
CPSF4-205ENST00000440514 MGAT4AQ9UM21 535 aa14.54□□□□□ -0.08
CPSF4-205ENST00000440514 LY6LH3BQJ8 138 aa14.53□□□□□ -0.08
CPSF4-205ENST00000440514 CHST1O43916 411 aa14.53□□□□□ -0.08
CPSF4-205ENST00000440514 MDKP21741 143 aaPredicted RBP14.53□□□□□ -0.08
CPSF4-205ENST00000440514 CEACAM3P40198 252 aa14.53□□□□□ -0.08
CPSF4-205ENST00000440514 MRPS15P82914 257 aaKnown RBP14.53□□□□□ -0.08
CPSF4-205ENST00000440514 GNMTQ14749 295 aa14.53□□□□□ -0.08
CPSF4-205ENST00000440514 HMGN3Q15651 99 aa14.53□□□□□ -0.08
CPSF4-205ENST00000440514 OR10R2Q8NGX6 335 aa14.53□□□□□ -0.08
CPSF4-205ENST00000440514 RAB3CQ96E17 227 aa14.53□□□□□ -0.08
CPSF4-205ENST00000440514 FUNDC2Q9BWH2 189 aa14.53□□□□□ -0.08
CPSF4-205ENST00000440514 C12orf4Q9NQ89 552 aa14.53□□□□□ -0.08
CPSF4-205ENST00000440514 GNG12Q9UBI6 72 aa14.53□□□□□ -0.08
CPSF4-205ENST00000440514 TCF19Q9Y242 345 aa14.53□□□□□ -0.08
CPSF4-205ENST00000440514 AMMECR1Q9Y4X0 333 aaPredicted RBP14.53□□□□□ -0.08
CPSF4-205ENST00000440514 A0A075B6Q4 140 aa14.52□□□□□ -0.09
CPSF4-205ENST00000440514 RAB27BO00194 218 aa14.52□□□□□ -0.09
CPSF4-205ENST00000440514 SLC31A2O15432 143 aa14.52□□□□□ -0.09
CPSF4-205ENST00000440514 RPL15P61313 204 aaKnown RBP14.52□□□□□ -0.09
CPSF4-205ENST00000440514 FOXL1Q12952 345 aa14.52□□□□□ -0.09
CPSF4-205ENST00000440514 DIAPH2-AS1Q14236 149 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms