RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 CHCHD6Q9BRQ6 235 aa13.03□□□□□ -0.32
MRPL55-220ENST00000411464 CHCHD3Q9NX63 227 aaKnown RBP13.03□□□□□ -0.32
MRPL55-220ENST00000411464 ZNF107Q9UII5 783 aaPredicted RBP13.03□□□□□ -0.32
MRPL55-220ENST00000411464 ZNF580Q9UK33 172 aa13.03□□□□□ -0.32
MRPL55-220ENST00000411464 E9PI62 339 aa13.02□□□□□ -0.33
MRPL55-220ENST00000411464 GEMIN2O14893 280 aaKnown RBP13.02□□□□□ -0.33
MRPL55-220ENST00000411464 FADS2O95864 444 aaKnown RBP13.02□□□□□ -0.33
MRPL55-220ENST00000411464 CD2P06729 351 aa13.02□□□□□ -0.33
MRPL55-220ENST00000411464 LYL1P12980 280 aa13.02□□□□□ -0.33
MRPL55-220ENST00000411464 RBM11P57052 281 aaKnown RBP13.02□□□□□ -0.33
MRPL55-220ENST00000411464 ZNF616Q08AN1 781 aa13.02□□□□□ -0.33
MRPL55-220ENST00000411464 Q3ZCU0 254 aa13.02□□□□□ -0.33
MRPL55-220ENST00000411464 FAM53AQ6NSI3 398 aaPredicted RBP13.02□□□□□ -0.33
MRPL55-220ENST00000411464 LINC00596Q86U02 117 aa13.02□□□□□ -0.33
MRPL55-220ENST00000411464 ZNF429Q86V71 674 aa13.02□□□□□ -0.33
MRPL55-220ENST00000411464 SBSPONQ8IVN8 264 aa13.02□□□□□ -0.33
MRPL55-220ENST00000411464 STX19Q8N4C7 294 aa13.02□□□□□ -0.33
MRPL55-220ENST00000411464 JAM3Q9BX67 310 aa13.02□□□□□ -0.33
MRPL55-220ENST00000411464 RAB9BQ9NP90 201 aa13.02□□□□□ -0.33
MRPL55-220ENST00000411464 PAK1IP1Q9NWT1 392 aaPredicted RBP13.02□□□□□ -0.33
MRPL55-220ENST00000411464 TAS2R4Q9NYW5 299 aa13.02□□□□□ -0.33
MRPL55-220ENST00000411464 GNG12Q9UBI6 72 aa13.02□□□□□ -0.33
MRPL55-220ENST00000411464 VSIG4Q9Y279 399 aa13.02□□□□□ -0.33
MRPL55-220ENST00000411464 AIPO00170 330 aa13.01□□□□□ -0.33
MRPL55-220ENST00000411464 SPINT2O43291 252 aa13.01□□□□□ -0.33
MRPL55-220ENST00000411464 MT-ND4P03905 459 aa13.01□□□□□ -0.33
MRPL55-220ENST00000411464 SLC2A2P11168 524 aaPredicted RBP13.01□□□□□ -0.33
MRPL55-220ENST00000411464 MPV17LQ2QL34 196 aa13.01□□□□□ -0.33
MRPL55-220ENST00000411464 SLC25A48Q6ZT89 311 aaKnown RBP13.01□□□□□ -0.33
MRPL55-220ENST00000411464 MYOZ3Q8TDC0 251 aa13.01□□□□□ -0.33
MRPL55-220ENST00000411464 KLK15Q9H2R5 256 aa13.01□□□□□ -0.33
MRPL55-220ENST00000411464 PALMDQ9NP74 551 aa13.01□□□□□ -0.33
MRPL55-220ENST00000411464 TMEM138Q9NPI0 162 aa13.01□□□□□ -0.33
MRPL55-220ENST00000411464 ERVK13-1Q9NX77 482 aa13.01□□□□□ -0.33
MRPL55-220ENST00000411464 IL36GQ9NZH8 169 aa13.01□□□□□ -0.33
MRPL55-220ENST00000411464 AASSQ9UDR5 926 aa13.01□□□□□ -0.33
MRPL55-220ENST00000411464 I3L521 148 aa13□□□□□ -0.33
MRPL55-220ENST00000411464 SLC31A2O15432 143 aa13□□□□□ -0.33
MRPL55-220ENST00000411464 ALPLP05186 524 aa13□□□□□ -0.33
MRPL55-220ENST00000411464 SERPINA2P20848 420 aa13□□□□□ -0.33
MRPL55-220ENST00000411464 MYF6P23409 242 aa13□□□□□ -0.33
MRPL55-220ENST00000411464 ZNF93P35789 620 aaPredicted RBP13□□□□□ -0.33
MRPL55-220ENST00000411464 PPP3R1P63098 170 aa13□□□□□ -0.33
MRPL55-220ENST00000411464 RUNX1Q01196 453 aa13□□□□□ -0.33
MRPL55-220ENST00000411464 ZIK1Q3SY52 487 aaPredicted RBP13□□□□□ -0.33
MRPL55-220ENST00000411464 ZNF497Q6ZNH5 498 aa13□□□□□ -0.33
MRPL55-220ENST00000411464 ZNF491Q8N8L2 437 aa13□□□□□ -0.33
MRPL55-220ENST00000411464 GPR148Q8TDV2 347 aa13□□□□□ -0.33
MRPL55-220ENST00000411464 RBMXL1Q96E39 390 aaKnown RBP13□□□□□ -0.33
MRPL55-220ENST00000411464 OR5B12Q96R08 314 aa13□□□□□ -0.33
MRPL55-220ENST00000411464 GNB4Q9HAV0 340 aa13□□□□□ -0.33
MRPL55-220ENST00000411464 TRAPPC2LQ9UL33 140 aa13□□□□□ -0.33
MRPL55-220ENST00000411464 WSB1Q9Y6I7 421 aa13□□□□□ -0.33
MRPL55-220ENST00000411464 OVOL1O14753 267 aa12.99□□□□□ -0.33
MRPL55-220ENST00000411464 ZNF780AO75290 641 aaPredicted RBP12.99□□□□□ -0.33
MRPL55-220ENST00000411464 GTF2F2P13984 249 aa12.99□□□□□ -0.33
MRPL55-220ENST00000411464 ZNF134P52741 427 aa12.99□□□□□ -0.33
MRPL55-220ENST00000411464 ZNF137PP52743 207 aa12.99□□□□□ -0.33
MRPL55-220ENST00000411464 KIAA0141Q14154 515 aaPredicted RBP12.99□□□□□ -0.33
MRPL55-220ENST00000411464 MMDQ15546 238 aa12.99□□□□□ -0.33
MRPL55-220ENST00000411464 TMEM30BQ3MIR4 351 aa12.99□□□□□ -0.33
MRPL55-220ENST00000411464 CT45A1Q5HYN5 189 aa12.99□□□□□ -0.33
MRPL55-220ENST00000411464 DDI2Q5TDH0 399 aa12.99□□□□□ -0.33
MRPL55-220ENST00000411464 OVCH2Q7RTZ1 564 aa12.99□□□□□ -0.33
MRPL55-220ENST00000411464 ZNF439Q8NDP4 499 aa12.99□□□□□ -0.33
MRPL55-220ENST00000411464 OR10V1Q8NGI7 309 aa12.99□□□□□ -0.33
MRPL55-220ENST00000411464 CT45A3Q8NHU0 189 aa12.99□□□□□ -0.33
MRPL55-220ENST00000411464 Q96MT0 163 aa12.99□□□□□ -0.33
MRPL55-220ENST00000411464 ZMAT4Q9H898 229 aa12.99□□□□□ -0.33
MRPL55-220ENST00000411464 AMBNQ9NP70 447 aa12.99□□□□□ -0.33
MRPL55-220ENST00000411464 ISYNA1Q9NPH2 558 aa12.99□□□□□ -0.33
MRPL55-220ENST00000411464 TENM2Q9NT68 2774 aa12.99□□□□□ -0.33
MRPL55-220ENST00000411464 C12orf77C9JDV5 145 aa12.98□□□□□ -0.33
MRPL55-220ENST00000411464 MCRIP1C9JLW8 97 aa12.98□□□□□ -0.33
MRPL55-220ENST00000411464 G3V318 75 aa12.98□□□□□ -0.33
MRPL55-220ENST00000411464 SAP30O75446 220 aa12.98□□□□□ -0.33
MRPL55-220ENST00000411464 FRMD6-AS1P0C7T7 363 aa12.98□□□□□ -0.33
MRPL55-220ENST00000411464 PPIFP30405 207 aaKnown RBP12.98□□□□□ -0.33
MRPL55-220ENST00000411464 VHLP40337 213 aa12.98□□□□□ -0.33
MRPL55-220ENST00000411464 GTF2A1P52655 376 aaPredicted RBP12.98□□□□□ -0.33
MRPL55-220ENST00000411464 GNB1P62873 340 aa12.98□□□□□ -0.33
MRPL55-220ENST00000411464 RAB40BQ12829 278 aa12.98□□□□□ -0.33
MRPL55-220ENST00000411464 SLC22A6Q4U2R8 563 aa12.98□□□□□ -0.33
MRPL55-220ENST00000411464 SYT6Q5T7P8 510 aaPredicted RBP12.98□□□□□ -0.33
MRPL55-220ENST00000411464 ASPHD1Q5U4P2 390 aa12.98□□□□□ -0.33
MRPL55-220ENST00000411464 STEAP3Q658P3 488 aa12.98□□□□□ -0.33
MRPL55-220ENST00000411464 PRR18Q8N4B5 295 aa12.98□□□□□ -0.33
MRPL55-220ENST00000411464 DCUN1D4Q92564 292 aa12.98□□□□□ -0.33
MRPL55-220ENST00000411464 TMEM106AQ96A25 262 aa12.98□□□□□ -0.33
MRPL55-220ENST00000411464 SPACA1Q9HBV2 294 aa12.98□□□□□ -0.33
MRPL55-220ENST00000411464 GMPPBQ9Y5P6 360 aa12.98□□□□□ -0.33
MRPL55-220ENST00000411464 EI24O14681 340 aa12.97□□□□□ -0.33
MRPL55-220ENST00000411464 LANCL1O43813 399 aa12.97□□□□□ -0.33
MRPL55-220ENST00000411464 IGLV1-40P01703 118 aa12.97□□□□□ -0.33
MRPL55-220ENST00000411464 BDKRB2P30411 391 aa12.97□□□□□ -0.33
MRPL55-220ENST00000411464 RAB9AP51151 201 aa12.97□□□□□ -0.33
MRPL55-220ENST00000411464 LSAMPQ13449 338 aa12.97□□□□□ -0.33
MRPL55-220ENST00000411464 DOC2BQ14184 412 aa12.97□□□□□ -0.33
MRPL55-220ENST00000411464 GPR176Q14439 515 aa12.97□□□□□ -0.33
MRPL55-220ENST00000411464 C6orf183Q5T699 404 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms