RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 SLC17A4Q9Y2C5 497 aa11□□□□□ -0.65
HERC3-203ENST00000407637 RALGAPA1Q6GYQ0 2036 aa11□□□□□ -0.65
HERC3-203ENST00000407637 MYO7AQ13402 2215 aa11□□□□□ -0.65
HERC3-203ENST00000407637 TMEM238LA0A1B0GVL6 79 aa11□□□□□ -0.65
HERC3-203ENST00000407637 OR6C6A6NF89 314 aa11□□□□□ -0.65
HERC3-203ENST00000407637 C1QTNF9BB2RNN3 333 aa11□□□□□ -0.65
HERC3-203ENST00000407637 HS3ST1O14792 307 aa11□□□□□ -0.65
HERC3-203ENST00000407637 GDF9O60383 454 aa11□□□□□ -0.65
HERC3-203ENST00000407637 IL33O95760 270 aa11□□□□□ -0.65
HERC3-203ENST00000407637 PGCP20142 388 aa11□□□□□ -0.65
HERC3-203ENST00000407637 TNFSF4P23510 183 aa11□□□□□ -0.65
HERC3-203ENST00000407637 PSMB3P49720 205 aa11□□□□□ -0.65
HERC3-203ENST00000407637 LHX2P50458 406 aa11□□□□□ -0.65
HERC3-203ENST00000407637 VAMP3Q15836 100 aa11□□□□□ -0.65
HERC3-203ENST00000407637 DOK3Q7L591 496 aa11□□□□□ -0.65
HERC3-203ENST00000407637 ZNF295-AS1Q8N0V1 137 aa11□□□□□ -0.65
HERC3-203ENST00000407637 TDRD6O60522 2096 aaKnown RBP10.99□□□□□ -0.65
HERC3-203ENST00000407637 NCOA6Q14686 2063 aaPredicted RBP10.99□□□□□ -0.65
HERC3-203ENST00000407637 A0A1W2PR80 420 aa10.99□□□□□ -0.65
HERC3-203ENST00000407637 C17orf105B2RV13 164 aa10.99□□□□□ -0.65
HERC3-203ENST00000407637 MS4A18H0YCH9 400 aa10.99□□□□□ -0.65
HERC3-203ENST00000407637 CRISP2P16562 243 aa10.99□□□□□ -0.65
HERC3-203ENST00000407637 FAHP16930 419 aa10.99□□□□□ -0.65
HERC3-203ENST00000407637 OR1D4P47884 311 aa10.99□□□□□ -0.65
HERC3-203ENST00000407637 FUT7Q11130 342 aa10.99□□□□□ -0.65
HERC3-203ENST00000407637 MS4A18Q3C1V0 323 aa10.99□□□□□ -0.65
HERC3-203ENST00000407637 NMSQ5H8A3 153 aa10.99□□□□□ -0.65
HERC3-203ENST00000407637 BAGE3Q86Y29 109 aa10.99□□□□□ -0.65
HERC3-203ENST00000407637 BAGE2Q86Y30 109 aa10.99□□□□□ -0.65
HERC3-203ENST00000407637 CCL4L1Q8NHW4 92 aa10.99□□□□□ -0.65
HERC3-203ENST00000407637 TMEM56Q96MV1 263 aa10.99□□□□□ -0.65
HERC3-203ENST00000407637 PRTFDC1Q9NRG1 225 aa10.99□□□□□ -0.65
HERC3-203ENST00000407637 TMEM56-RWDD3S4R434 201 aa10.99□□□□□ -0.65
HERC3-203ENST00000407637 ANGPTL7O43827 346 aa10.99□□□□□ -0.65
HERC3-203ENST00000407637 MMP23AO75900 390 aa10.99□□□□□ -0.65
HERC3-203ENST00000407637 IGKV1D-33P01593 117 aa10.99□□□□□ -0.65
HERC3-203ENST00000407637 IGKV1-33P01594 117 aa10.99□□□□□ -0.65
HERC3-203ENST00000407637 ESDP10768 282 aa10.99□□□□□ -0.65
HERC3-203ENST00000407637 CBLN1P23435 193 aa10.99□□□□□ -0.65
HERC3-203ENST00000407637 CDAP32320 146 aa10.99□□□□□ -0.65
HERC3-203ENST00000407637 ZP4Q12836 540 aa10.99□□□□□ -0.65
HERC3-203ENST00000407637 GPM6BQ13491 265 aa10.99□□□□□ -0.65
HERC3-203ENST00000407637 SPIN3Q5JUX0 258 aa10.99□□□□□ -0.65
HERC3-203ENST00000407637 C17orf99Q6UX52 265 aa10.99□□□□□ -0.65
HERC3-203ENST00000407637 RD3Q7Z3Z2 195 aa10.99□□□□□ -0.65
HERC3-203ENST00000407637 GPR146Q96CH1 333 aa10.99□□□□□ -0.65
HERC3-203ENST00000407637 DDIT4LQ96D03 193 aa10.99□□□□□ -0.65
HERC3-203ENST00000407637 SLC46A1Q96NT5 459 aa10.99□□□□□ -0.65
HERC3-203ENST00000407637 SLC25A22Q9H936 323 aa10.99□□□□□ -0.65
HERC3-203ENST00000407637 SLC39A9Q9NUM3 307 aa10.99□□□□□ -0.65
HERC3-203ENST00000407637 BET1LQ9NYM9 111 aa10.99□□□□□ -0.65
HERC3-203ENST00000407637 ELOVL5Q9NYP7 299 aa10.99□□□□□ -0.65
HERC3-203ENST00000407637 TAAR3PQ9P1P4 343 aa10.99□□□□□ -0.65
HERC3-203ENST00000407637 CCL1P22362 96 aa10.98□□□□□ -0.65
HERC3-203ENST00000407637 DTYMKP23919 212 aa10.98□□□□□ -0.65
HERC3-203ENST00000407637 TSPOP30536 169 aa10.98□□□□□ -0.65
HERC3-203ENST00000407637 MPLP40238 635 aa10.98□□□□□ -0.65
HERC3-203ENST00000407637 DAP3P51398 398 aaKnown RBP10.98□□□□□ -0.65
HERC3-203ENST00000407637 BLKP51451 505 aa10.98□□□□□ -0.65
HERC3-203ENST00000407637 ARL16Q0P5N6 197 aa10.98□□□□□ -0.65
HERC3-203ENST00000407637 DTX1Q86Y01 620 aa10.98□□□□□ -0.65
HERC3-203ENST00000407637 PSMG3Q9BT73 122 aaPredicted RBP10.98□□□□□ -0.65
HERC3-203ENST00000407637 ZBP1Q9H171 429 aa10.98□□□□□ -0.65
HERC3-203ENST00000407637 ZNF586Q9NXT0 402 aa10.98□□□□□ -0.65
HERC3-203ENST00000407637 GTF3C1Q12789 2109 aa10.98□□□□□ -0.65
HERC3-203ENST00000407637 TRAV30A0A087WSZ9 112 aa10.98□□□□□ -0.65
HERC3-203ENST00000407637 RER1O15258 196 aa10.98□□□□□ -0.65
HERC3-203ENST00000407637 PPYP01298 95 aa10.98□□□□□ -0.65
HERC3-203ENST00000407637 SERPINA7P05543 415 aa10.98□□□□□ -0.65
HERC3-203ENST00000407637 BMP5P22003 454 aa10.98□□□□□ -0.65
HERC3-203ENST00000407637 GNRHRP30968 328 aa10.98□□□□□ -0.65
HERC3-203ENST00000407637 EFNA3P52797 238 aa10.98□□□□□ -0.65
HERC3-203ENST00000407637 ZNF468Q5VIY5 522 aaPredicted RBP10.98□□□□□ -0.65
HERC3-203ENST00000407637 ZNF525Q8N782 197 aa10.98□□□□□ -0.65
HERC3-203ENST00000407637 OR14C36Q8NHC7 312 aa10.98□□□□□ -0.65
HERC3-203ENST00000407637 SGMS2Q8NHU3 365 aa10.98□□□□□ -0.65
HERC3-203ENST00000407637 BAHD1Q8TBE0 780 aaPredicted RBP10.98□□□□□ -0.65
HERC3-203ENST00000407637 LRRC3BQ96PB8 259 aa10.98□□□□□ -0.65
HERC3-203ENST00000407637 NUDT22Q9BRQ3 303 aa10.98□□□□□ -0.65
HERC3-203ENST00000407637 RP1P56715 2156 aa10.98□□□□□ -0.65
HERC3-203ENST00000407637 LILRB3O75022 631 aa10.97□□□□□ -0.65
HERC3-203ENST00000407637 C1QTNF9P0C862 333 aa10.97□□□□□ -0.65
HERC3-203ENST00000407637 PSG1P11464 419 aa10.97□□□□□ -0.65
HERC3-203ENST00000407637 EGR1P18146 543 aa10.97□□□□□ -0.65
HERC3-203ENST00000407637 PPP1CAP62136 330 aa10.97□□□□□ -0.65
HERC3-203ENST00000407637 RPP25LQ8N5L8 163 aaKnown RBP10.97□□□□□ -0.65
HERC3-203ENST00000407637 SIGLECL1Q8N7X8 197 aa10.97□□□□□ -0.65
HERC3-203ENST00000407637 FGF14Q92915 247 aa10.97□□□□□ -0.65
HERC3-203ENST00000407637 LYZL4Q96KX0 146 aa10.97□□□□□ -0.65
HERC3-203ENST00000407637 VDAC3Q9Y277 283 aa10.97□□□□□ -0.65
HERC3-203ENST00000407637 VSTM2BA6NLU5 285 aa10.97□□□□□ -0.65
HERC3-203ENST00000407637 MLNRO43193 412 aa10.97□□□□□ -0.65
HERC3-203ENST00000407637 VENTXO95231 258 aa10.97□□□□□ -0.65
HERC3-203ENST00000407637 BIDP55957 195 aa10.97□□□□□ -0.65
HERC3-203ENST00000407637 TLE3Q04726 772 aa10.97□□□□□ -0.65
HERC3-203ENST00000407637 ACSF3Q4G176 576 aaPredicted RBP10.97□□□□□ -0.65
HERC3-203ENST00000407637 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.97□□□□□ -0.65
HERC3-203ENST00000407637 BCL2L2Q92843 193 aaPredicted RBP10.97□□□□□ -0.65
HERC3-203ENST00000407637 WNT10AQ9GZT5 417 aa10.97□□□□□ -0.65
HERC3-203ENST00000407637 CLN8Q9UBY8 286 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms