RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 OR9I1Q8NGQ6 314 aa1.25□□□□□ -2.21
CD47-203ENST00000398258 OR4A5Q8NH83 315 aa1.25□□□□□ -2.21
CD47-203ENST00000398258 CD200R1Q8TD46 325 aa1.25□□□□□ -2.21
CD47-203ENST00000398258 GALMQ96C23 342 aa1.25□□□□□ -2.21
CD47-203ENST00000398258 SLC25A44Q96H78 314 aaPredicted RBP1.25□□□□□ -2.21
CD47-203ENST00000398258 IGF2BP2-AS1Q96M15 143 aa1.25□□□□□ -2.21
CD47-203ENST00000398258 CHST5Q9GZS9 411 aa1.25□□□□□ -2.21
CD47-203ENST00000398258 ARL6Q9H0F7 186 aa1.25□□□□□ -2.21
CD47-203ENST00000398258 WDR54Q9H977 334 aa1.25□□□□□ -2.21
CD47-203ENST00000398258 DMAC2Q9NW81 257 aa1.25□□□□□ -2.21
CD47-203ENST00000398258 ZNF230Q9UIE0 474 aaPredicted RBP1.25□□□□□ -2.21
CD47-203ENST00000398258 NAGKQ9UJ70 344 aa1.25□□□□□ -2.21
CD47-203ENST00000398258 MCTS1Q9ULC4 181 aaKnown RBP1.25□□□□□ -2.21
CD47-203ENST00000398258 SCML1Q9UN30 329 aa1.25□□□□□ -2.21
CD47-203ENST00000398258 PHLDA3Q9Y5J5 127 aa1.25□□□□□ -2.21
CD47-203ENST00000398258 ZNF407Q9C0G0 2248 aa1.24□□□□□ -2.21
CD47-203ENST00000398258 CACNA1DQ01668 2161 aa1.24□□□□□ -2.21
CD47-203ENST00000398258 NUP205Q92621 2012 aa1.24□□□□□ -2.21
CD47-203ENST00000398258 LIN7AO14910 233 aaPredicted RBP1.24□□□□□ -2.21
CD47-203ENST00000398258 CDK14O94921 469 aa1.24□□□□□ -2.21
CD47-203ENST00000398258 ORM1P02763 201 aa1.24□□□□□ -2.21
CD47-203ENST00000398258 CRABP2P29373 138 aa1.24□□□□□ -2.21
CD47-203ENST00000398258 RAB2AP61019 212 aa1.24□□□□□ -2.21
CD47-203ENST00000398258 OR8G1Q15617 311 aa1.24□□□□□ -2.21
CD47-203ENST00000398258 LGALSLQ3ZCW2 172 aaPredicted RBP1.24□□□□□ -2.21
CD47-203ENST00000398258 PYDC2Q56P42 97 aa1.24□□□□□ -2.21
CD47-203ENST00000398258 HENMT1Q5T8I9 393 aaKnown RBP1.24□□□□□ -2.21
CD47-203ENST00000398258 PDPK2PQ6A1A2 396 aa1.24□□□□□ -2.21
CD47-203ENST00000398258 FAM45BPQ6NSW5 357 aa1.24□□□□□ -2.21
CD47-203ENST00000398258 LRP11Q86VZ4 500 aa1.24□□□□□ -2.21
CD47-203ENST00000398258 ZFAND2AQ8N6M9 145 aa1.24□□□□□ -2.21
CD47-203ENST00000398258 LFNGQ8NES3 379 aa1.24□□□□□ -2.21
CD47-203ENST00000398258 OR5D18Q8NGL1 313 aa1.24□□□□□ -2.21
CD47-203ENST00000398258 OR11L1Q8NGX0 322 aa1.24□□□□□ -2.21
CD47-203ENST00000398258 OR5K1Q8NHB7 308 aa1.24□□□□□ -2.21
CD47-203ENST00000398258 MUC7Q8TAX7 377 aa1.24□□□□□ -2.21
CD47-203ENST00000398258 OR5P3Q8WZ94 311 aa1.24□□□□□ -2.21
CD47-203ENST00000398258 TAMM41Q96BW9 452 aa1.24□□□□□ -2.21
CD47-203ENST00000398258 HIGD2AQ9BW72 106 aa1.24□□□□□ -2.21
CD47-203ENST00000398258 BBS2Q9BXC9 721 aa1.24□□□□□ -2.21
CD47-203ENST00000398258 FBXL15Q9H469 300 aa1.24□□□□□ -2.21
CD47-203ENST00000398258 C11orf49Q9H6J7 331 aa1.24□□□□□ -2.21
CD47-203ENST00000398258 EURLQ9NYK6 297 aa1.24□□□□□ -2.21
CD47-203ENST00000398258 SLC23A2Q9UGH3 650 aa1.24□□□□□ -2.21
CD47-203ENST00000398258 PUS1Q9Y606 427 aaKnown RBP eCLIP1.24□□□□□ -2.21
CD47-203ENST00000398258 YLPM1P49750 1951 aaKnown RBP1.23□□□□□ -2.21
CD47-203ENST00000398258 A6NED7 52 aa1.23□□□□□ -2.21
CD47-203ENST00000398258 SMLR1H3BR10 107 aa1.23□□□□□ -2.21
CD47-203ENST00000398258 TOR1AO14656 332 aa1.23□□□□□ -2.21
CD47-203ENST00000398258 CALUO43852 315 aaPredicted RBP1.23□□□□□ -2.21
CD47-203ENST00000398258 GUSBP08236 651 aa1.23□□□□□ -2.21
CD47-203ENST00000398258 RCVRNP35243 200 aa1.23□□□□□ -2.21
CD47-203ENST00000398258 ACTR1BP42025 376 aa1.23□□□□□ -2.21
CD47-203ENST00000398258 ZNHIT3Q15649 155 aaPredicted RBP1.23□□□□□ -2.21
CD47-203ENST00000398258 CLEC12BQ2HXU8 276 aa1.23□□□□□ -2.21
CD47-203ENST00000398258 SPNS3Q6ZMD2 512 aa1.23□□□□□ -2.21
CD47-203ENST00000398258 SLC13A5Q86YT5 568 aaPredicted RBP1.23□□□□□ -2.21
CD47-203ENST00000398258 KRTAP13-1Q8IUC0 172 aa1.23□□□□□ -2.21
CD47-203ENST00000398258 BOD1L2Q8IYS8 172 aa1.23□□□□□ -2.21
CD47-203ENST00000398258 HS3ST5Q8IZT8 346 aa1.23□□□□□ -2.21
CD47-203ENST00000398258 C2orf73Q8N5S3 287 aaPredicted RBP1.23□□□□□ -2.21
CD47-203ENST00000398258 YIPF7Q8N8F6 280 aa1.23□□□□□ -2.21
CD47-203ENST00000398258 OR11G2Q8NGC1 345 aa1.23□□□□□ -2.21
CD47-203ENST00000398258 STOML3Q8TAV4 291 aa1.23□□□□□ -2.21
CD47-203ENST00000398258 SPPL2BQ8TCT7 592 aa1.23□□□□□ -2.21
CD47-203ENST00000398258 CCDC12Q8WUD4 166 aaPredicted RBP1.23□□□□□ -2.21
CD47-203ENST00000398258 GNB1LQ9BYB4 327 aa1.23□□□□□ -2.21
CD47-203ENST00000398258 GTSF1LQ9H1H1 148 aa1.23□□□□□ -2.21
CD47-203ENST00000398258 TMEM216Q9P0N5 145 aa1.23□□□□□ -2.21
CD47-203ENST00000398258 VPREB3Q9UKI3 123 aa1.23□□□□□ -2.21
CD47-203ENST00000398258 OR51B4Q9Y5P0 310 aa1.23□□□□□ -2.21
CD47-203ENST00000398258 DNMT1P26358 1616 aaKnown RBP1.22□□□□□ -2.21
CD47-203ENST00000398258 COL5A1P20908 1838 aaPredicted RBP1.22□□□□□ -2.21
CD47-203ENST00000398258 COL18A1P39060 1754 aa1.22□□□□□ -2.21
CD47-203ENST00000398258 ARGFXA6NJG6 315 aa1.22□□□□□ -2.21
CD47-203ENST00000398258 FTCDNL1E5RQL4 147 aa1.22□□□□□ -2.21
CD47-203ENST00000398258 M0QYV0 167 aa1.22□□□□□ -2.21
CD47-203ENST00000398258 ITGB1BP1O14713 200 aa1.22□□□□□ -2.21
CD47-203ENST00000398258 CBR3O75828 277 aa1.22□□□□□ -2.21
CD47-203ENST00000398258 FBP1P09467 338 aa1.22□□□□□ -2.21
CD47-203ENST00000398258 IGHV3-30-3P0DP02 117 aa1.22□□□□□ -2.21
CD47-203ENST00000398258 ZNF22P17026 224 aaPredicted RBP1.22□□□□□ -2.21
CD47-203ENST00000398258 GADD45AP24522 165 aa1.22□□□□□ -2.21
CD47-203ENST00000398258 DMTNQ08495 405 aa1.22□□□□□ -2.21
CD47-203ENST00000398258 MGAT3Q09327 533 aa1.22□□□□□ -2.21
CD47-203ENST00000398258 APOFQ13790 326 aa1.22□□□□□ -2.21
CD47-203ENST00000398258 CENPWQ5EE01 88 aa1.22□□□□□ -2.21
CD47-203ENST00000398258 EBLN2Q6P2I7 272 aa1.22□□□□□ -2.21
CD47-203ENST00000398258 TTC33Q6PID6 262 aaPredicted RBP1.22□□□□□ -2.21
CD47-203ENST00000398258 Q6ZRU5 148 aa1.22□□□□□ -2.21
CD47-203ENST00000398258 SCXQ7RTU7 201 aa1.22□□□□□ -2.21
CD47-203ENST00000398258 BLIDQ8IZY5 108 aa1.22□□□□□ -2.21
CD47-203ENST00000398258 OTUD6BQ8N6M0 293 aa1.22□□□□□ -2.21
CD47-203ENST00000398258 OR10P1Q8NGE3 313 aa1.22□□□□□ -2.21
CD47-203ENST00000398258 OR51H1Q8NH63 302 aa1.22□□□□□ -2.21
CD47-203ENST00000398258 SUN5Q8TC36 379 aa1.22□□□□□ -2.21
CD47-203ENST00000398258 HIST1H2BAQ96A08 127 aa1.22□□□□□ -2.21
CD47-203ENST00000398258 GPR22Q99680 433 aa1.22□□□□□ -2.21
CD47-203ENST00000398258 UPK3BQ9BT76 320 aa1.22□□□□□ -2.21
CD47-203ENST00000398258 ZNF426Q9BUY5 554 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms