RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 OR51I2Q9H344 312 aa11.88□□□□□ -0.51
HMGCL-203ENST00000374490 TUBA4BQ9H853 241 aa11.88□□□□□ -0.51
HMGCL-203ENST00000374490 CCL28Q9NRJ3 127 aa11.88□□□□□ -0.51
HMGCL-203ENST00000374490 SSUH2Q9Y2M2 353 aa11.88□□□□□ -0.51
HMGCL-203ENST00000374490 POLDIP2Q9Y2S7 368 aa11.88□□□□□ -0.51
HMGCL-203ENST00000374490 OR2W1Q9Y3N9 320 aa11.88□□□□□ -0.51
HMGCL-203ENST00000374490 IGKV1D-13A0A0B4J2D9 117 aa11.87□□□□□ -0.51
HMGCL-203ENST00000374490 A0A1B0GU03 582 aa11.87□□□□□ -0.51
HMGCL-203ENST00000374490 FAM24AA6NFZ4 105 aa11.87□□□□□ -0.51
HMGCL-203ENST00000374490 C9JQL5 133 aa11.87□□□□□ -0.51
HMGCL-203ENST00000374490 HSD17B6O14756 317 aa11.87□□□□□ -0.51
HMGCL-203ENST00000374490 NKX2-8O15522 239 aa11.87□□□□□ -0.51
HMGCL-203ENST00000374490 PGLYRP1O75594 196 aaPredicted RBP11.87□□□□□ -0.51
HMGCL-203ENST00000374490 IGKV1-13P0DP09 117 aa11.87□□□□□ -0.51
HMGCL-203ENST00000374490 WNT5AP41221 380 aa11.87□□□□□ -0.51
HMGCL-203ENST00000374490 HOXA1P49639 335 aaPredicted RBP11.87□□□□□ -0.51
HMGCL-203ENST00000374490 SOX8P57073 446 aa11.87□□□□□ -0.51
HMGCL-203ENST00000374490 POLR2GP62487 172 aaKnown RBP eCLIP11.87□□□□□ -0.51
HMGCL-203ENST00000374490 ARG2P78540 354 aa11.87□□□□□ -0.51
HMGCL-203ENST00000374490 TSC22D1Q15714 1073 aa11.87□□□□□ -0.51
HMGCL-203ENST00000374490 DPPA3Q6W0C5 159 aa11.87□□□□□ -0.51
HMGCL-203ENST00000374490 OR10J5Q8NHC4 309 aa11.87□□□□□ -0.51
HMGCL-203ENST00000374490 SCRT1Q9BWW7 348 aa11.87□□□□□ -0.51
HMGCL-203ENST00000374490 SAV1Q9H4B6 383 aaPredicted RBP11.87□□□□□ -0.51
HMGCL-203ENST00000374490 MED13Q9UHV7 2174 aa11.87□□□□□ -0.51
HMGCL-203ENST00000374490 HELZ2Q9BYK8 2649 aaKnown RBP11.86□□□□□ -0.51
HMGCL-203ENST00000374490 TRGV5A0A0B4J1U4 118 aa11.86□□□□□ -0.51
HMGCL-203ENST00000374490 TRAV24A0A0B4J272 114 aa11.86□□□□□ -0.51
HMGCL-203ENST00000374490 IGKV1-6A0A0C4DH72 117 aa11.86□□□□□ -0.51
HMGCL-203ENST00000374490 ZNF891A8MT65 544 aaPredicted RBP11.86□□□□□ -0.51
HMGCL-203ENST00000374490 SSSCA1O60232 199 aa11.86□□□□□ -0.51
HMGCL-203ENST00000374490 DFFBO76075 338 aa11.86□□□□□ -0.51
HMGCL-203ENST00000374490 F2RP25116 425 aa11.86□□□□□ -0.51
HMGCL-203ENST00000374490 SRSF6Q13247 344 aaKnown RBP11.86□□□□□ -0.51
HMGCL-203ENST00000374490 ZNF324BQ6AW86 544 aaPredicted RBP11.86□□□□□ -0.51
HMGCL-203ENST00000374490 TMEM182Q6ZP80 229 aaPredicted RBP11.86□□□□□ -0.51
HMGCL-203ENST00000374490 MDP1Q86V88 176 aa11.86□□□□□ -0.51
HMGCL-203ENST00000374490 WDYHV1Q96HA8 205 aa11.86□□□□□ -0.51
HMGCL-203ENST00000374490 HS3ST6Q96QI5 342 aa11.86□□□□□ -0.51
HMGCL-203ENST00000374490 EIF5A2Q9GZV4 153 aaKnown RBP11.86□□□□□ -0.51
HMGCL-203ENST00000374490 SLC35B3Q9H1N7 401 aa11.86□□□□□ -0.51
HMGCL-203ENST00000374490 SH3BGRL3Q9H299 93 aa11.86□□□□□ -0.51
HMGCL-203ENST00000374490 GLRX2Q9NS18 164 aa11.86□□□□□ -0.51
HMGCL-203ENST00000374490 IL36RNQ9UBH0 155 aa11.86□□□□□ -0.51
HMGCL-203ENST00000374490 PRSS50Q9UI38 385 aa11.86□□□□□ -0.51
HMGCL-203ENST00000374490 IL18BPO95998 194 aa11.86□□□□□ -0.51
HMGCL-203ENST00000374490 SELEP16581 610 aa11.86□□□□□ -0.51
HMGCL-203ENST00000374490 RHEBQ15382 184 aa11.86□□□□□ -0.51
HMGCL-203ENST00000374490 RNF212Q495C1 297 aa11.86□□□□□ -0.51
HMGCL-203ENST00000374490 LINC00518Q8N0U6 118 aa11.86□□□□□ -0.51
HMGCL-203ENST00000374490 TMEM178AQ8NBL3 297 aa11.86□□□□□ -0.51
HMGCL-203ENST00000374490 OR10V1Q8NGI7 309 aa11.86□□□□□ -0.51
HMGCL-203ENST00000374490 OR2G3Q8NGZ4 309 aa11.86□□□□□ -0.51
HMGCL-203ENST00000374490 FAM213BQ8TBF2 198 aa11.86□□□□□ -0.51
HMGCL-203ENST00000374490 RXFP4Q8TDU9 374 aa11.86□□□□□ -0.51
HMGCL-203ENST00000374490 EGLN1Q9GZT9 426 aa11.86□□□□□ -0.51
HMGCL-203ENST00000374490 UNKLQ9H9P5 680 aaKnown RBP11.86□□□□□ -0.51
HMGCL-203ENST00000374490 KCNJ16Q9NPI9 418 aa11.86□□□□□ -0.51
HMGCL-203ENST00000374490 MYO7BQ6PIF6 2116 aa11.85□□□□□ -0.51
HMGCL-203ENST00000374490 HSPB6O14558 160 aa11.85□□□□□ -0.51
HMGCL-203ENST00000374490 HBE1P02100 147 aa11.85□□□□□ -0.51
HMGCL-203ENST00000374490 IFNA4P05014 189 aa11.85□□□□□ -0.51
HMGCL-203ENST00000374490 SERPINE2P07093 398 aa11.85□□□□□ -0.51
HMGCL-203ENST00000374490 ZNF44P15621 663 aa11.85□□□□□ -0.51
HMGCL-203ENST00000374490 NFYBP25208 207 aa11.85□□□□□ -0.51
HMGCL-203ENST00000374490 ATP6V0CP27449 155 aa11.85□□□□□ -0.51
HMGCL-203ENST00000374490 CD200P41217 278 aa11.85□□□□□ -0.51
HMGCL-203ENST00000374490 RAB2AP61019 212 aa11.85□□□□□ -0.51
HMGCL-203ENST00000374490 RAB5BP61020 215 aa11.85□□□□□ -0.51
HMGCL-203ENST00000374490 RPL23AP62750 156 aaKnown RBP11.85□□□□□ -0.51
HMGCL-203ENST00000374490 GABRA6Q16445 453 aa11.85□□□□□ -0.51
HMGCL-203ENST00000374490 HIKESHIQ53FT3 197 aa11.85□□□□□ -0.51
HMGCL-203ENST00000374490 Q6P435 159 aa11.85□□□□□ -0.51
HMGCL-203ENST00000374490 STX12Q86Y82 276 aa11.85□□□□□ -0.51
HMGCL-203ENST00000374490 PLPPR1Q8TBJ4 325 aa11.85□□□□□ -0.51
HMGCL-203ENST00000374490 LSM10Q969L4 123 aaKnown RBP11.85□□□□□ -0.51
HMGCL-203ENST00000374490 RAB40CQ96S21 281 aa11.85□□□□□ -0.51
HMGCL-203ENST00000374490 ATP5SQ99766 215 aa11.85□□□□□ -0.51
HMGCL-203ENST00000374490 PARP12Q9H0J9 701 aaKnown RBP11.85□□□□□ -0.51
HMGCL-203ENST00000374490 ZNF462Q96JM2 2506 aa11.85□□□□□ -0.51
HMGCL-203ENST00000374490 CNTRLQ7Z7A1 2325 aa11.85□□□□□ -0.51
HMGCL-203ENST00000374490 FLNBO75369 2602 aaKnown RBP11.84□□□□□ -0.51
HMGCL-203ENST00000374490 COLCA2A8K830 154 aa11.84□□□□□ -0.51
HMGCL-203ENST00000374490 CRYBA1P05813 215 aa11.84□□□□□ -0.51
HMGCL-203ENST00000374490 CCL11P51671 97 aa11.84□□□□□ -0.51
HMGCL-203ENST00000374490 TGFBR3Q03167 851 aa11.84□□□□□ -0.51
HMGCL-203ENST00000374490 CLINT1Q14677 625 aa11.84□□□□□ -0.51
HMGCL-203ENST00000374490 C3AR1Q16581 482 aa11.84□□□□□ -0.51
HMGCL-203ENST00000374490 CXorf66Q5JRM2 361 aaPredicted RBP11.84□□□□□ -0.51
HMGCL-203ENST00000374490 OR2T2Q6IF00 324 aa11.84□□□□□ -0.51
HMGCL-203ENST00000374490 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.84□□□□□ -0.51
HMGCL-203ENST00000374490 RDH5Q92781 318 aa11.84□□□□□ -0.51
HMGCL-203ENST00000374490 GMPPAQ96IJ6 420 aaPredicted RBP11.84□□□□□ -0.51
HMGCL-203ENST00000374490 HIPK2Q9H2X6 1198 aa11.84□□□□□ -0.51
HMGCL-203ENST00000374490 CDH20Q9HBT6 801 aa11.84□□□□□ -0.51
HMGCL-203ENST00000374490 RPS10P5Q9NQ39 176 aa11.84□□□□□ -0.51
HMGCL-203ENST00000374490 LIPGQ9Y5X9 500 aa11.84□□□□□ -0.51
HMGCL-203ENST00000374490 MEX3AA1L020 520 aaKnown RBP11.83□□□□□ -0.52
HMGCL-203ENST00000374490 TMEM210A6NLX4 147 aa11.83□□□□□ -0.52
HMGCL-203ENST00000374490 HS3ST1O14792 307 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms