RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 XKRY2A2RUG3 117 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 ANKUB1A6NFN9 424 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 MSGN1A6NI15 193 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 H3BML4 177 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 H3BQ15 152 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 PSMB10P40306 273 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 CTRLP40313 264 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 ERVS71-1P61550 626 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 ZNF117Q03924 483 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 RASGEF1BQ0VAM2 473 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 PNRC1Q12796 327 aaPredicted RBP5.88□□□□□ -1.47
CSDE1-204ENST00000369530 FAM166AQ6J272 317 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 ZNF585AQ6P3V2 769 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 CISD2Q8N5K1 135 aaKnown RBP5.88□□□□□ -1.47
CSDE1-204ENST00000369530 OR9K2Q8NGE7 335 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 OR4S2Q8NH73 311 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 TMEM234Q8WY98 164 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 DCUN1D4Q92564 292 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 RPUSD4Q96CM3 377 aaKnown RBP5.88□□□□□ -1.47
CSDE1-204ENST00000369530 PRSS27Q9BQR3 290 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 METTL7AQ9H8H3 244 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 CMC2Q9NRP2 79 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 SLC45A2Q9UMX9 530 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 LOC100289279A0A1B0GTE1 492 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 J3QW42 95 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 CYB5BO43169 146 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 TSPAN15O95858 294 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 HSPB1P04792 205 aaKnown RBP5.88□□□□□ -1.47
CSDE1-204ENST00000369530 SRP19P09132 144 aaKnown RBP5.88□□□□□ -1.47
CSDE1-204ENST00000369530 POLR2HP52434 150 aaKnown RBP5.88□□□□□ -1.47
CSDE1-204ENST00000369530 KRTAP10-9P60411 292 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 TP53I3Q53FA7 332 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 LEG1Q6P5S2 330 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 KDM8Q8N371 416 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 DDIT4LQ96D03 193 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 RASD2Q96D21 266 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 OR8B4Q96RC9 309 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 FUT9Q9Y231 359 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 DNAH6Q9C0G6 4158 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 A0A0B4J2E0 115 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 TRBV5-5A0A0J9YX44 114 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 A0A1B0GX12 115 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 SCGB1D2O95969 90 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 PGA4P0DJD7 388 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 PGA5P0DJD9 388 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 EDNRAP25101 427 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 GNRHRP30968 328 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 SLC6A8P48029 635 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 MIDNQ504T8 468 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 ALG10Q5BKT4 473 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 WBP2NLQ6ICG8 309 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 VHLLQ6RSH7 139 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 C9orf106Q8NAJ2 232 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 POC1AQ8NBT0 407 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 OR1L6Q8NGR2 347 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 TVP23CQ96ET8 276 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 Q96M85 177 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 TSSK2Q96PF2 358 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 FKBP11Q9NYL4 201 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 PLEK2Q9NYT0 353 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 VSIG4Q9Y279 399 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 PTPN13Q12923 2485 aa5.88□□□□□ -1.47
CSDE1-204ENST00000369530 RTTNQ86VV8 2226 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 RAMP3O60896 148 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 SCAF4O95104 1147 aaKnown RBP5.87□□□□□ -1.47
CSDE1-204ENST00000369530 PNPP00491 289 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 CRYGCP07315 174 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 HIST1H1CP16403 213 aaKnown RBP5.87□□□□□ -1.47
CSDE1-204ENST00000369530 PGCP20142 388 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 KLK2P20151 261 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 ANOS1P23352 680 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 CEACAM3P40198 252 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 PRRX1P54821 245 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 HTD2P86397 168 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 ZNF433Q8N7K0 673 aaPredicted RBP5.87□□□□□ -1.47
CSDE1-204ENST00000369530 OR14K1Q8NGZ2 314 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 C11orf40Q8WZ69 217 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 AQP3Q92482 292 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 TMEM45BQ96B21 275 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 HCAR1Q9BXC0 346 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 SRXN1Q9BYN0 137 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 ZNF430Q9H8G1 570 aaPredicted RBP5.87□□□□□ -1.47
CSDE1-204ENST00000369530 RNF150Q9ULK6 438 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 ANAPC10Q9UM13 185 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 ABCA2Q9BZC7 2435 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 TRBV5-7A0A0A0MS05 114 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 SERTM2A0A1B0GWG4 89 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 CBY3A6NI87 242 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 G3V3Y1 287 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 K7N7A8 449 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 ZNHIT1O43257 154 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 CD3DP04234 171 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 PET100P0DJ07 73 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 BMP5P22003 454 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 DSCR4P56555 118 aaPredicted RBP5.87□□□□□ -1.47
CSDE1-204ENST00000369530 SMIM21Q3B7S5 101 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 SOHLH1Q5JUK2 328 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 ZNF506Q5JVG8 444 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 PRAMEF20Q5VT98 475 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 ZNF343Q6P1L6 599 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms