RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 NDUFC1O43677 76 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 TNFP01375 233 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 ST6GALNAC3Q8NDV1 305 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 RSPO3Q9BXY4 272 aaPredicted RBP3.3□□□□□ -1.88
SYNE1-207ENST00000367255 JKAMPQ9P055 326 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 TSPOP30536 169 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 PDLIM4P50479 330 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 OR4F17Q8NGA8 305 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 OR4F5Q8NH21 305 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 OR4F4Q96R69 305 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 PRR13Q9NZ81 148 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 CCL16O15467 120 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 OR1D2P34982 312 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 H2BFWTQ7Z2G1 175 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 NKX6-3A6NJ46 265 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 ZFAND6Q6FIF0 208 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 A0A1W2PQM1 296 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 LRRC3CA6NJW4 275 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 EVI2AP22794 236 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 TMEM52BQ4KMG9 183 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 ACP7Q6ZNF0 438 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 A0A1W2PPC1 479 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 LPAR6P43657 344 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 ARG2P78540 354 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 TMEM240Q5SV17 173 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 TNRC6CQ9HCJ0 1690 aaKnown RBP3.29□□□□□ -1.88
SYNE1-207ENST00000367255 A0A1B0GWA3 101 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 CLDN7O95471 211 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 PTGDSP41222 190 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 ORMDL2Q53FV1 153 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 TMEM40Q8WWA1 233 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 TRBV6-6A0A0A6YYG2 114 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 CTSOP43234 321 aaPredicted RBP3.29□□□□□ -1.88
SYNE1-207ENST00000367255 MRPS21P82921 87 aaKnown RBP3.29□□□□□ -1.88
SYNE1-207ENST00000367255 A0A0A6YYC8 382 aaPredicted RBP3.29□□□□□ -1.88
SYNE1-207ENST00000367255 I3L1I5 382 aaPredicted RBP3.29□□□□□ -1.88
SYNE1-207ENST00000367255 GYPBP06028 91 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 TRGC1P0CF51 173 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 PLP1P60201 277 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 IL11RAQ14626 422 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 PREX1Q8TCU6 1659 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 FCGR2CP31995 323 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 OR1L8Q8NGR8 309 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 RAX2Q96IS3 184 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 YJEFN3A6XGL0 299 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 EFSO43281 561 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 SBK3P0C264 359 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 CLECL1Q8IZS7 167 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 C19orf47Q8N9M1 422 aaKnown RBP3.29□□□□□ -1.88
SYNE1-207ENST00000367255 MSRAQ9UJ68 235 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 WNK2Q9Y3S1 2297 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 C1orf140Q5VVS0 124 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 IL17RELQ6ZVW7 336 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 WDR54Q9H977 334 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 NUTF2P61970 127 aaKnown RBP3.29□□□□□ -1.88
SYNE1-207ENST00000367255 VMA21Q3ZAQ7 101 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 NUP43Q8NFH3 380 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 CCL2P13500 99 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 OR52I2Q8NH67 350 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 TMEM101Q96IK0 257 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 CDC14CA4D256 554 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 RPS4XP62701 263 aaKnown RBP3.29□□□□□ -1.88
SYNE1-207ENST00000367255 ZNF721Q8TF20 911 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 MRAP2Q96G30 205 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 SLC7A10Q9NS82 523 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 CA2P00918 260 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 MAVSQ7Z434 540 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 SPATA12Q7Z6I5 190 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 MUC20Q8N307 709 aaPredicted RBP3.29□□□□□ -1.88
SYNE1-207ENST00000367255 DLL1O00548 723 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 CD79AP11912 226 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 C1orf61Q13536 156 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 SDK1Q7Z5N4 2213 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 CD68P34810 354 aaPredicted RBP3.29□□□□□ -1.88
SYNE1-207ENST00000367255 CDKN1AP38936 164 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 CLDN2P57739 230 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 ZNF660Q6AZW8 331 aaPredicted RBP3.29□□□□□ -1.88
SYNE1-207ENST00000367255 LAMTOR1Q6IAA8 161 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 OR13A1Q8NGR1 328 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 TRAV8-1A0A0A6YYK1 113 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 SNRPCP09234 159 aaKnown RBP3.29□□□□□ -1.88
SYNE1-207ENST00000367255 PAX1P15863 534 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 CCDC88CQ9P219 2028 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 A0A1W2PPE3 182 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 GASTP01350 101 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 FGF5P12034 268 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 RPL7P18124 248 aaKnown RBP3.29□□□□□ -1.88
SYNE1-207ENST00000367255 FAM78BQ5VT40 261 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 CFAP161Q6P656 301 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 TAAR3PQ9P1P4 343 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 TAC3Q9UHF0 121 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 A0A0G2JK05 382 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 CEACAM8P31997 349 aaPredicted RBP3.29□□□□□ -1.88
SYNE1-207ENST00000367255 CCL14Q16627 93 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 LY6G6FQ5SQ64 297 aa3.29□□□□□ -1.88
SYNE1-207ENST00000367255 MYF5P13349 255 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 ZNF385BQ569K4 471 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 APCDD1LQ8NCL9 501 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 FMC1Q96HJ9 113 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 URGCP-MRPS24S4R325 110 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms