RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 LSM10Q969L4 123 aaKnown RBP18.95■□□□□ 0.62
PNKP-201ENST00000322344 OR1A1Q9P1Q5 309 aa18.95■□□□□ 0.62
PNKP-201ENST00000322344 WIPI2Q9Y4P8 454 aa18.95■□□□□ 0.62
PNKP-201ENST00000322344 GPR179Q6PRD1 2367 aa18.94■□□□□ 0.62
PNKP-201ENST00000322344 DNAJC13O75165 2243 aa18.94■□□□□ 0.62
PNKP-201ENST00000322344 CDRT15L2A8MXV6 281 aa18.94■□□□□ 0.62
PNKP-201ENST00000322344 OMGP23515 440 aa18.94■□□□□ 0.62
PNKP-201ENST00000322344 PAX6P26367 422 aa18.94■□□□□ 0.62
PNKP-201ENST00000322344 DYNLT3P51808 116 aa18.94■□□□□ 0.62
PNKP-201ENST00000322344 ZNF154Q13106 437 aa18.94■□□□□ 0.62
PNKP-201ENST00000322344 GUSBP1Q15486 140 aa18.94■□□□□ 0.62
PNKP-201ENST00000322344 OR1J1Q8NGS3 322 aa18.94■□□□□ 0.62
PNKP-201ENST00000322344 TMEM171Q8WVE6 324 aa18.94■□□□□ 0.62
PNKP-201ENST00000322344 GPR146Q96CH1 333 aa18.94■□□□□ 0.62
PNKP-201ENST00000322344 MBNL3Q9NUK0 354 aaKnown RBP18.94■□□□□ 0.62
PNKP-201ENST00000322344 TMEM50AO95807 157 aa18.93■□□□□ 0.62
PNKP-201ENST00000322344 PSG2P11465 335 aa18.93■□□□□ 0.62
PNKP-201ENST00000322344 TESK1Q15569 626 aa18.93■□□□□ 0.62
PNKP-201ENST00000322344 PIP4P1Q86T03 277 aa18.93■□□□□ 0.62
PNKP-201ENST00000322344 OR51H1Q8NH63 302 aa18.93■□□□□ 0.62
PNKP-201ENST00000322344 TRIB1Q96RU8 372 aa18.93■□□□□ 0.62
PNKP-201ENST00000322344 RAB40CQ96S21 281 aa18.93■□□□□ 0.62
PNKP-201ENST00000322344 COL6A3P12111 3177 aa18.93■□□□□ 0.62
PNKP-201ENST00000322344 ARID1AO14497 2285 aa18.93■□□□□ 0.62
PNKP-201ENST00000322344 A0A1W2PR80 420 aa18.93■□□□□ 0.62
PNKP-201ENST00000322344 BTBD17A6NE02 478 aa18.93■□□□□ 0.62
PNKP-201ENST00000322344 LYZL6O75951 148 aa18.93■□□□□ 0.62
PNKP-201ENST00000322344 CBR1P16152 277 aa18.93■□□□□ 0.62
PNKP-201ENST00000322344 RPL23AP62750 156 aaKnown RBP18.93■□□□□ 0.62
PNKP-201ENST00000322344 ODF3L1Q8IXM7 274 aa18.93■□□□□ 0.62
PNKP-201ENST00000322344 CDIPTO14735 213 aa18.92■□□□□ 0.62
PNKP-201ENST00000322344 CEACAM1P13688 526 aa18.92■□□□□ 0.62
PNKP-201ENST00000322344 CD200P41217 278 aa18.92■□□□□ 0.62
PNKP-201ENST00000322344 PAX9P55771 341 aa18.92■□□□□ 0.62
PNKP-201ENST00000322344 ERVS71-1P61550 626 aa18.92■□□□□ 0.62
PNKP-201ENST00000322344 PSG7Q13046 419 aa18.92■□□□□ 0.62
PNKP-201ENST00000322344 IGFBP7Q16270 282 aa18.92■□□□□ 0.62
PNKP-201ENST00000322344 STX12Q86Y82 276 aa18.92■□□□□ 0.62
PNKP-201ENST00000322344 RNASE11Q8TAA1 199 aaKnown RBP18.92■□□□□ 0.62
PNKP-201ENST00000322344 LIN7CQ9NUP9 197 aaKnown RBP18.92■□□□□ 0.62
PNKP-201ENST00000322344 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.91■□□□□ 0.62
PNKP-201ENST00000322344 C3orf80F5H4A9 247 aa18.91■□□□□ 0.62
PNKP-201ENST00000322344 NDUFA2O43678 99 aa18.91■□□□□ 0.62
PNKP-201ENST00000322344 DFFBO76075 338 aa18.91■□□□□ 0.62
PNKP-201ENST00000322344 CST7O76096 145 aa18.91■□□□□ 0.62
PNKP-201ENST00000322344 CCL11P51671 97 aa18.91■□□□□ 0.62
PNKP-201ENST00000322344 AVPI1Q5T686 147 aa18.91■□□□□ 0.62
PNKP-201ENST00000322344 IGFL2Q6UWQ7 119 aa18.91■□□□□ 0.62
PNKP-201ENST00000322344 GCNT2Q8N0V5 402 aa18.91■□□□□ 0.62
PNKP-201ENST00000322344 C1orf162Q8NEQ5 155 aaPredicted RBP18.91■□□□□ 0.62
PNKP-201ENST00000322344 ATP5SQ99766 215 aa18.91■□□□□ 0.62
PNKP-201ENST00000322344 SLC35B3Q9H1N7 401 aa18.91■□□□□ 0.62
PNKP-201ENST00000322344 A0A0G2JRQ6 117 aa18.91■□□□□ 0.62
PNKP-201ENST00000322344 AQP7O14520 342 aa18.91■□□□□ 0.62
PNKP-201ENST00000322344 NKX2-8O15522 239 aa18.91■□□□□ 0.62
PNKP-201ENST00000322344 IGLV2-14P01704 120 aa18.91■□□□□ 0.62
PNKP-201ENST00000322344 TUBG1P23258 451 aa18.91■□□□□ 0.62
PNKP-201ENST00000322344 HOXC12P31275 282 aa18.91■□□□□ 0.62
PNKP-201ENST00000322344 C15orf54Q8N8G6 183 aa18.91■□□□□ 0.62
PNKP-201ENST00000322344 TUBG2Q9NRH3 451 aa18.91■□□□□ 0.62
PNKP-201ENST00000322344 RBM7Q9Y580 266 aaKnown RBP18.91■□□□□ 0.62
PNKP-201ENST00000322344 EPHA1P21709 976 aa18.9■□□□□ 0.62
PNKP-201ENST00000322344 FDCSPQ8NFU4 85 aa18.9■□□□□ 0.62
PNKP-201ENST00000322344 HES4Q9HCC6 221 aa18.9■□□□□ 0.62
PNKP-201ENST00000322344 KIAA1324LA8MWY0 1029 aaPredicted RBP18.9■□□□□ 0.62
PNKP-201ENST00000322344 COX5AP20674 150 aa18.9■□□□□ 0.62
PNKP-201ENST00000322344 PPP1CCP36873 323 aaKnown RBP18.9■□□□□ 0.62
PNKP-201ENST00000322344 ALKBH6Q3KRA9 238 aa18.9■□□□□ 0.62
PNKP-201ENST00000322344 DPPA3Q6W0C5 159 aa18.9■□□□□ 0.62
PNKP-201ENST00000322344 KLF14Q8TD94 323 aaPredicted RBP18.9■□□□□ 0.62
PNKP-201ENST00000322344 RXFP4Q8TDU9 374 aa18.9■□□□□ 0.62
PNKP-201ENST00000322344 KCNJ16Q9NPI9 418 aa18.9■□□□□ 0.62
PNKP-201ENST00000322344 WSB1Q9Y6I7 421 aa18.9■□□□□ 0.62
PNKP-201ENST00000322344 TRAV17A0A0B4J275 112 aa18.89■□□□□ 0.61
PNKP-201ENST00000322344 RNF212BA8MTL3 300 aa18.89■□□□□ 0.61
PNKP-201ENST00000322344 TXNL1O43396 289 aa18.89■□□□□ 0.61
PNKP-201ENST00000322344 HAND1O96004 215 aa18.89■□□□□ 0.61
PNKP-201ENST00000322344 GRPP07492 148 aa18.89■□□□□ 0.61
PNKP-201ENST00000322344 SULT1A1P50225 295 aa18.89■□□□□ 0.61
PNKP-201ENST00000322344 TMEM217Q8N7C4 229 aa18.89■□□□□ 0.61
PNKP-201ENST00000322344 KCNIP1Q9NZI2 227 aa18.89■□□□□ 0.61
PNKP-201ENST00000322344 TRAV39A0A0B4J263 110 aa18.88■□□□□ 0.61
PNKP-201ENST00000322344 COLCA2A8K830 154 aa18.88■□□□□ 0.61
PNKP-201ENST00000322344 IGKV3-15P01624 115 aa18.88■□□□□ 0.61
PNKP-201ENST00000322344 PRR18Q8N4B5 295 aa18.88■□□□□ 0.61
PNKP-201ENST00000322344 SARAFQ96BY9 339 aa18.88■□□□□ 0.61
PNKP-201ENST00000322344 OBP2BQ9NPH6 170 aa18.88■□□□□ 0.61
PNKP-201ENST00000322344 KCNS2Q9ULS6 477 aa18.88■□□□□ 0.61
PNKP-201ENST00000322344 PPP1R3CQ9UQK1 317 aa18.88■□□□□ 0.61
PNKP-201ENST00000322344 FBXO7Q9Y3I1 522 aa18.88■□□□□ 0.61
PNKP-201ENST00000322344 FREM2Q5SZK8 3169 aa18.88■□□□□ 0.61
PNKP-201ENST00000322344 KNTC1P50748 2209 aa18.88■□□□□ 0.61
PNKP-201ENST00000322344 TMEM30CPA0ZSE6 113 aa18.88■□□□□ 0.61
PNKP-201ENST00000322344 MEX3AA1L020 520 aaKnown RBP18.88■□□□□ 0.61
PNKP-201ENST00000322344 NXPH3O95157 252 aa18.88■□□□□ 0.61
PNKP-201ENST00000322344 IGKV1-39P01597 117 aa18.88■□□□□ 0.61
PNKP-201ENST00000322344 IGKV1D-39P04432 117 aa18.88■□□□□ 0.61
PNKP-201ENST00000322344 FOLR2P14207 255 aa18.88■□□□□ 0.61
PNKP-201ENST00000322344 RAB13P51153 203 aa18.88■□□□□ 0.61
PNKP-201ENST00000322344 CNEP1R1Q8N9A8 125 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms