RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 TRAV8-2A0A0B4J237 113 aa10.27□□□□□ -0.76
SNIP1-201ENST00000296215 LMX1BO60663 402 aa10.27□□□□□ -0.76
SNIP1-201ENST00000296215 LGALS2P05162 132 aa10.27□□□□□ -0.76
SNIP1-201ENST00000296215 RND2P52198 227 aa10.27□□□□□ -0.76
SNIP1-201ENST00000296215 SERF2P84101 59 aa10.27□□□□□ -0.76
SNIP1-201ENST00000296215 OR51G1Q8NGK1 321 aa10.27□□□□□ -0.76
SNIP1-201ENST00000296215 PLA2G3Q9NZ20 509 aa10.27□□□□□ -0.76
SNIP1-201ENST00000296215 CHD3Q12873 2000 aaKnown RBP10.27□□□□□ -0.76
SNIP1-201ENST00000296215 A0A087X0K7 114 aa10.27□□□□□ -0.77
SNIP1-201ENST00000296215 TSPAN13O95857 204 aa10.27□□□□□ -0.77
SNIP1-201ENST00000296215 MFAP2P55001 183 aa10.27□□□□□ -0.77
SNIP1-201ENST00000296215 SHISA2Q6UWI4 295 aa10.27□□□□□ -0.77
SNIP1-201ENST00000296215 CDRT4Q8N9R6 151 aa10.27□□□□□ -0.77
SNIP1-201ENST00000296215 TRIP11Q15643 1979 aa10.27□□□□□ -0.77
SNIP1-201ENST00000296215 LRP6O75581 1613 aa10.27□□□□□ -0.77
SNIP1-201ENST00000296215 KLF7O75840 302 aaPredicted RBP10.27□□□□□ -0.77
SNIP1-201ENST00000296215 TMPRSS3P57727 454 aa10.27□□□□□ -0.77
SNIP1-201ENST00000296215 FKBP1BP68106 108 aa10.27□□□□□ -0.77
SNIP1-201ENST00000296215 ZNF117Q03924 483 aa10.27□□□□□ -0.77
SNIP1-201ENST00000296215 NNATQ16517 81 aa10.27□□□□□ -0.77
SNIP1-201ENST00000296215 TSPO2Q5TGU0 170 aa10.27□□□□□ -0.77
SNIP1-201ENST00000296215 ARHGAP5-AS1Q96IT6 56 aa10.27□□□□□ -0.77
SNIP1-201ENST00000296215 NALCNQ8IZF0 1738 aa10.27□□□□□ -0.77
SNIP1-201ENST00000296215 CACNA1DQ01668 2161 aa10.27□□□□□ -0.77
SNIP1-201ENST00000296215 RPL36A-HNRNPH2H7BZ11 118 aa10.27□□□□□ -0.77
SNIP1-201ENST00000296215 OR1D5P58170 312 aa10.27□□□□□ -0.77
SNIP1-201ENST00000296215 FUT7Q11130 342 aa10.27□□□□□ -0.77
SNIP1-201ENST00000296215 WDR38Q5JTN6 314 aa10.27□□□□□ -0.77
SNIP1-201ENST00000296215 SLC25A40Q8TBP6 338 aa10.27□□□□□ -0.77
SNIP1-201ENST00000296215 DIO2Q92813 273 aa10.27□□□□□ -0.77
SNIP1-201ENST00000296215 SCAMP4Q969E2 229 aa10.27□□□□□ -0.77
SNIP1-201ENST00000296215 MRGPRFQ96AM1 343 aa10.27□□□□□ -0.77
SNIP1-201ENST00000296215 GPR27Q9NS67 375 aa10.27□□□□□ -0.77
SNIP1-201ENST00000296215 A0A1B0GW64 132 aa10.26□□□□□ -0.77
SNIP1-201ENST00000296215 J3QR06 171 aa10.26□□□□□ -0.77
SNIP1-201ENST00000296215 THY1P04216 161 aa10.26□□□□□ -0.77
SNIP1-201ENST00000296215 LCN12Q6JVE5 192 aa10.26□□□□□ -0.77
SNIP1-201ENST00000296215 C4orf45Q96LM5 186 aa10.26□□□□□ -0.77
SNIP1-201ENST00000296215 ANKRD10Q9NXR5 420 aa10.26□□□□□ -0.77
SNIP1-201ENST00000296215 TRAV5A0A0B4J249 113 aa10.26□□□□□ -0.77
SNIP1-201ENST00000296215 CDC42EP2O14613 210 aa10.26□□□□□ -0.77
SNIP1-201ENST00000296215 MMP23AO75900 390 aa10.26□□□□□ -0.77
SNIP1-201ENST00000296215 MT-CO3P00414 261 aa10.26□□□□□ -0.77
SNIP1-201ENST00000296215 C3orf79P0CE67 100 aa10.26□□□□□ -0.77
SNIP1-201ENST00000296215 CYB561P49447 251 aa10.26□□□□□ -0.77
SNIP1-201ENST00000296215 CLRN1P58418 232 aa10.26□□□□□ -0.77
SNIP1-201ENST00000296215 DLX2Q07687 328 aaPredicted RBP10.26□□□□□ -0.77
SNIP1-201ENST00000296215 MZT1Q08AG7 82 aa10.26□□□□□ -0.77
SNIP1-201ENST00000296215 LRRC75BQ2VPJ9 315 aa10.26□□□□□ -0.77
SNIP1-201ENST00000296215 ANXA2RQ3ZCQ2 193 aa10.26□□□□□ -0.77
SNIP1-201ENST00000296215 SAXO1Q8IYX7 474 aa10.26□□□□□ -0.77
SNIP1-201ENST00000296215 GALMQ96C23 342 aa10.26□□□□□ -0.77
SNIP1-201ENST00000296215 CDH20Q9HBT6 801 aa10.26□□□□□ -0.77
SNIP1-201ENST00000296215 MRPL17Q9NRX2 175 aaKnown RBP10.26□□□□□ -0.77
SNIP1-201ENST00000296215 TIMP1P01033 207 aa10.26□□□□□ -0.77
SNIP1-201ENST00000296215 PSMB5P28074 263 aa10.26□□□□□ -0.77
SNIP1-201ENST00000296215 SSTR5P35346 364 aa10.26□□□□□ -0.77
SNIP1-201ENST00000296215 PFN3P60673 137 aa10.26□□□□□ -0.77
SNIP1-201ENST00000296215 SRSF7Q16629 238 aaKnown RBP eCLIP10.26□□□□□ -0.77
SNIP1-201ENST00000296215 TRAT1Q6PIZ9 186 aa10.26□□□□□ -0.77
SNIP1-201ENST00000296215 LRRC75AQ8NAA5 344 aa10.26□□□□□ -0.77
SNIP1-201ENST00000296215 CACNG8Q8WXS5 425 aa10.26□□□□□ -0.77
SNIP1-201ENST00000296215 CCL2P13500 99 aa10.26□□□□□ -0.77
SNIP1-201ENST00000296215 ATG4DQ86TL0 474 aaPredicted RBP10.26□□□□□ -0.77
SNIP1-201ENST00000296215 NPEPL1Q8NDH3 523 aa10.26□□□□□ -0.77
SNIP1-201ENST00000296215 SUSD6Q92537 303 aa10.26□□□□□ -0.77
SNIP1-201ENST00000296215 TM4SF18Q96CE8 201 aa10.26□□□□□ -0.77
SNIP1-201ENST00000296215 ZNF689Q96CS4 500 aaPredicted RBP10.26□□□□□ -0.77
SNIP1-201ENST00000296215 PARP4Q9UKK3 1724 aaKnown RBP10.25□□□□□ -0.77
SNIP1-201ENST00000296215 PROB1E7EW31 1015 aa10.25□□□□□ -0.77
SNIP1-201ENST00000296215 K7EP34 96 aa10.25□□□□□ -0.77
SNIP1-201ENST00000296215 CLDN15P56746 228 aa10.25□□□□□ -0.77
SNIP1-201ENST00000296215 PPP1CAP62136 330 aa10.25□□□□□ -0.77
SNIP1-201ENST00000296215 RPS15P62841 145 aaKnown RBP10.25□□□□□ -0.77
SNIP1-201ENST00000296215 CDCP2Q5VXM1 449 aa10.25□□□□□ -0.77
SNIP1-201ENST00000296215 FCRL6Q6DN72 434 aa10.25□□□□□ -0.77
SNIP1-201ENST00000296215 OR4D11Q8NGI4 311 aa10.25□□□□□ -0.77
SNIP1-201ENST00000296215 TRBV6-7A0A0A0MS04 114 aa10.25□□□□□ -0.77
SNIP1-201ENST00000296215 A0A1W2PQM1 296 aa10.25□□□□□ -0.77
SNIP1-201ENST00000296215 OR11H12B2RN74 326 aa10.25□□□□□ -0.77
SNIP1-201ENST00000296215 ETHE1O95571 254 aa10.25□□□□□ -0.77
SNIP1-201ENST00000296215 KIR2DS4P43632 304 aa10.25□□□□□ -0.77
SNIP1-201ENST00000296215 GGTLC2Q14390 218 aa10.25□□□□□ -0.77
SNIP1-201ENST00000296215 ETDBQ3ZM63 59 aa10.25□□□□□ -0.77
SNIP1-201ENST00000296215 Q6ZWC4 215 aa10.25□□□□□ -0.77
SNIP1-201ENST00000296215 MMD2Q8IY49 270 aa10.25□□□□□ -0.77
SNIP1-201ENST00000296215 YAF2Q8IY57 180 aa10.25□□□□□ -0.77
SNIP1-201ENST00000296215 OR11H1Q8NG94 326 aa10.25□□□□□ -0.77
SNIP1-201ENST00000296215 OR11H2Q8NH07 326 aa10.25□□□□□ -0.77
SNIP1-201ENST00000296215 RAB1CQ92928 201 aa10.25□□□□□ -0.77
SNIP1-201ENST00000296215 GLIS2Q9BZE0 524 aaPredicted RBP10.25□□□□□ -0.77
SNIP1-201ENST00000296215 IGHV2-26A0A0B4J1V2 119 aa10.25□□□□□ -0.77
SNIP1-201ENST00000296215 IL4P05112 153 aa10.25□□□□□ -0.77
SNIP1-201ENST00000296215 PRSS1P07477 247 aa10.25□□□□□ -0.77
SNIP1-201ENST00000296215 IGFBP2P18065 325 aa10.25□□□□□ -0.77
SNIP1-201ENST00000296215 SLC25A1P53007 311 aa10.25□□□□□ -0.77
SNIP1-201ENST00000296215 ARL16Q0P5N6 197 aa10.25□□□□□ -0.77
SNIP1-201ENST00000296215 SRSF9Q13242 221 aaKnown RBP eCLIP10.25□□□□□ -0.77
SNIP1-201ENST00000296215 OR2V2Q96R30 315 aa10.25□□□□□ -0.77
SNIP1-201ENST00000296215 ERRFI1Q9UJM3 462 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms