RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 VEGFBP49765 207 aa6.21□□□□□ -1.41
CSDE1-201ENST00000261443 PPP1CBP62140 327 aa6.21□□□□□ -1.41
CSDE1-201ENST00000261443 PIGYQ3MUY2 71 aa6.21□□□□□ -1.41
CSDE1-201ENST00000261443 ACSF3Q4G176 576 aaPredicted RBP6.21□□□□□ -1.41
CSDE1-201ENST00000261443 WDR5BQ86VZ2 330 aa6.21□□□□□ -1.41
CSDE1-201ENST00000261443 STPG4Q8N801 248 aa6.21□□□□□ -1.41
CSDE1-201ENST00000261443 MRPL43Q8N983 215 aaKnown RBP6.21□□□□□ -1.41
CSDE1-201ENST00000261443 ZNF721Q8TF20 911 aa6.21□□□□□ -1.41
CSDE1-201ENST00000261443 ORAOV1Q8WV07 137 aa6.21□□□□□ -1.41
CSDE1-201ENST00000261443 DDIT4LQ96D03 193 aa6.21□□□□□ -1.41
CSDE1-201ENST00000261443 WWTR1Q9GZV5 400 aa6.21□□□□□ -1.41
CSDE1-201ENST00000261443 TAAR3PQ9P1P4 343 aa6.21□□□□□ -1.41
CSDE1-201ENST00000261443 ASPMQ8IZT6 3477 aa6.21□□□□□ -1.41
CSDE1-201ENST00000261443 RP1P56715 2156 aa6.21□□□□□ -1.41
CSDE1-201ENST00000261443 ARHGAP21Q5T5U3 1957 aa6.21□□□□□ -1.41
CSDE1-201ENST00000261443 DOCK11Q5JSL3 2073 aa6.21□□□□□ -1.42
CSDE1-201ENST00000261443 TMEM150CB9EJG8 249 aa6.21□□□□□ -1.42
CSDE1-201ENST00000261443 NDUFB8O95169 186 aa6.21□□□□□ -1.42
CSDE1-201ENST00000261443 IGKV3-11P04433 115 aa6.21□□□□□ -1.42
CSDE1-201ENST00000261443 ADMP35318 185 aa6.21□□□□□ -1.42
CSDE1-201ENST00000261443 ZNF709Q8N972 641 aa6.21□□□□□ -1.42
CSDE1-201ENST00000261443 OR1L6Q8NGR2 347 aa6.21□□□□□ -1.42
CSDE1-201ENST00000261443 SLC37A2Q8TED4 501 aa6.21□□□□□ -1.42
CSDE1-201ENST00000261443 PINX1Q96BK5 328 aaKnown RBP6.21□□□□□ -1.42
CSDE1-201ENST00000261443 BTF3L4Q96K17 158 aa6.21□□□□□ -1.42
CSDE1-201ENST00000261443 SLC7A10Q9NS82 523 aa6.21□□□□□ -1.42
CSDE1-201ENST00000261443 RYDENQ9NUL5 291 aaKnown RBP6.21□□□□□ -1.42
CSDE1-201ENST00000261443 WIPI2Q9Y4P8 454 aa6.21□□□□□ -1.42
CSDE1-201ENST00000261443 MAP1BP46821 2468 aaKnown RBP6.21□□□□□ -1.42
CSDE1-201ENST00000261443 BRWD1Q9NSI6 2320 aa6.21□□□□□ -1.42
CSDE1-201ENST00000261443 COL6A3P12111 3177 aa6.21□□□□□ -1.42
CSDE1-201ENST00000261443 CCDC85CA6NKD9 419 aa6.21□□□□□ -1.42
CSDE1-201ENST00000261443 K7EP13 123 aa6.21□□□□□ -1.42
CSDE1-201ENST00000261443 HNRNPA2B1P22626 353 aaKnown RBP6.21□□□□□ -1.42
CSDE1-201ENST00000261443 CLDN17P56750 224 aa6.21□□□□□ -1.42
CSDE1-201ENST00000261443 PDCD1Q15116 288 aa6.21□□□□□ -1.42
CSDE1-201ENST00000261443 KCNMB1Q16558 191 aa6.21□□□□□ -1.42
CSDE1-201ENST00000261443 ATP6V1FQ16864 119 aa6.21□□□□□ -1.42
CSDE1-201ENST00000261443 RSPO4Q2I0M5 234 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-201ENST00000261443 ZNF818PQ6ZRF7 136 aa6.21□□□□□ -1.42
CSDE1-201ENST00000261443 DTX1Q86Y01 620 aa6.21□□□□□ -1.42
CSDE1-201ENST00000261443 GAPTQ8N292 157 aa6.21□□□□□ -1.42
CSDE1-201ENST00000261443 OR5AU1Q8NGC0 362 aa6.21□□□□□ -1.42
CSDE1-201ENST00000261443 ALKBH3Q96Q83 286 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-201ENST00000261443 TUBG2Q9NRH3 451 aa6.21□□□□□ -1.42
CSDE1-201ENST00000261443 A0A0U1RQV5 110 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 LIPT2A6NK58 231 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 VENTXO95231 258 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 IGLV3-1P01715 115 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 FBXW4P57775 412 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 MLF1P58340 268 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 LRRC75BQ2VPJ9 315 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 RIPPLY2Q5TAB7 128 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 MYPOPQ86VE0 399 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-201ENST00000261443 ZNF525Q8N782 197 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 RAB40CQ96S21 281 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 ALKBH7Q9BT30 221 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-201ENST00000261443 ZNF552Q9H707 407 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-201ENST00000261443 ALKBH4Q9NXW9 302 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 NCOA6Q14686 2063 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-201ENST00000261443 SEC16AO15027 2179 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 VSTM2BA6NLU5 285 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 SHISA8B8ZZ34 492 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 NXPH2O95156 264 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 POU2F2P09086 479 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 HNRNPA1P09651 372 aaKnown RBP eCLIP6.2□□□□□ -1.42
CSDE1-201ENST00000261443 UCP1P25874 307 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 HBG1P69891 147 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 HBG2P69892 147 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 ARL16Q0P5N6 197 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 MALLQ13021 153 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 MYBPHQ13203 477 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 UBE2V1Q13404 147 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 MSMO1Q15800 293 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 SLC25A47Q6Q0C1 308 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 TCF23Q7RTU1 214 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 RPP25LQ8N5L8 163 aaKnown RBP6.2□□□□□ -1.42
CSDE1-201ENST00000261443 OR4B1Q8NGF8 309 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 GATAD1Q8WUU5 269 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 TXN2Q99757 166 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 REPIN1Q9BWE0 567 aaKnown RBP6.2□□□□□ -1.42
CSDE1-201ENST00000261443 SAMD10Q9BYL1 202 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 ZNF442Q9H7R0 627 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 ZDHHC11Q9H8X9 412 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 PLSCR2Q9NRY7 297 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 TRAV39A0A0B4J263 110 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 SERF1AO75920 110 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 OPN1LWP04000 364 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 IAPPP10997 89 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 Q6ZPA2 131 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-201ENST00000261443 ZNF295-AS1Q8N0V1 137 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 LYG1Q8N1E2 194 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 OSR2Q8N2R0 312 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 ST8SIA1Q92185 356 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 GSX1Q9H4S2 264 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-201ENST00000261443 SLC25A22Q9H936 323 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 PSENENQ9NZ42 101 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 ST3GAL6Q9Y274 331 aa6.2□□□□□ -1.42
CSDE1-201ENST00000261443 LAMTOR2Q9Y2Q5 125 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms