RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 Q96M66 194 aa12.59□□□□□ -0.39
LINC00339-209ENST00000635450 TMEM59Q9BXS4 323 aa12.59□□□□□ -0.39
LINC00339-209ENST00000635450 CALYQ9NYX4 217 aa12.59□□□□□ -0.39
LINC00339-209ENST00000635450 IDI2-AS1Q9NZ38 188 aa12.59□□□□□ -0.39
LINC00339-209ENST00000635450 RCC2Q9P258 522 aaKnown RBP12.59□□□□□ -0.39
LINC00339-209ENST00000635450 PEX16Q9Y5Y5 336 aa12.59□□□□□ -0.39
LINC00339-209ENST00000635450 MINOS1-NBL1R4GNA1 71 aa12.59□□□□□ -0.39
LINC00339-209ENST00000635450 TRDV1A0A1B0GX56 115 aa12.58□□□□□ -0.4
LINC00339-209ENST00000635450 FAM172BPA6NC97 362 aa12.58□□□□□ -0.4
LINC00339-209ENST00000635450 SLC17A2O00624 439 aa12.58□□□□□ -0.4
LINC00339-209ENST00000635450 PDCD5O14737 125 aa12.58□□□□□ -0.4
LINC00339-209ENST00000635450 SLC22A1O15245 554 aa12.58□□□□□ -0.4
LINC00339-209ENST00000635450 CHST1O43916 411 aa12.58□□□□□ -0.4
LINC00339-209ENST00000635450 BPNT1O95861 308 aa12.58□□□□□ -0.4
LINC00339-209ENST00000635450 IL1AP01583 271 aa12.58□□□□□ -0.4
LINC00339-209ENST00000635450 VSIG8P0DPA2 414 aa12.58□□□□□ -0.4
LINC00339-209ENST00000635450 GZMHP20718 246 aa12.58□□□□□ -0.4
LINC00339-209ENST00000635450 MYL9P24844 172 aa12.58□□□□□ -0.4
LINC00339-209ENST00000635450 PRRX1P54821 245 aa12.58□□□□□ -0.4
LINC00339-209ENST00000635450 DEFA6Q01524 100 aa12.58□□□□□ -0.4
LINC00339-209ENST00000635450 FAM189A2Q15884 450 aa12.58□□□□□ -0.4
LINC00339-209ENST00000635450 SSX2Q16385 188 aa12.58□□□□□ -0.4
LINC00339-209ENST00000635450 DYNAPQ8N1N2 210 aa12.58□□□□□ -0.4
LINC00339-209ENST00000635450 ABCB10Q9NRK6 738 aa12.58□□□□□ -0.4
LINC00339-209ENST00000635450 ETAA1Q9NY74 926 aa12.58□□□□□ -0.4
LINC00339-209ENST00000635450 V9GY05 133 aa12.58□□□□□ -0.4
LINC00339-209ENST00000635450 AIPO00170 330 aa12.57□□□□□ -0.4
LINC00339-209ENST00000635450 PDCD6O75340 191 aa12.57□□□□□ -0.4
LINC00339-209ENST00000635450 GLAP06280 429 aa12.57□□□□□ -0.4
LINC00339-209ENST00000635450 CGB3P0DN86 165 aa12.57□□□□□ -0.4
LINC00339-209ENST00000635450 CGB7P0DN87 165 aa12.57□□□□□ -0.4
LINC00339-209ENST00000635450 CD37P11049 281 aa12.57□□□□□ -0.4
LINC00339-209ENST00000635450 ARSBP15848 533 aa12.57□□□□□ -0.4
LINC00339-209ENST00000635450 GALP22466 123 aa12.57□□□□□ -0.4
LINC00339-209ENST00000635450 HTR1DP28221 377 aa12.57□□□□□ -0.4
LINC00339-209ENST00000635450 GDNFP39905 211 aa12.57□□□□□ -0.4
LINC00339-209ENST00000635450 RPS27AP62979 156 aaKnown RBP12.57□□□□□ -0.4
LINC00339-209ENST00000635450 RAB11BQ15907 218 aa12.57□□□□□ -0.4
LINC00339-209ENST00000635450 KCTD21Q4G0X4 260 aa12.57□□□□□ -0.4
LINC00339-209ENST00000635450 PLA1AQ53H76 456 aa12.57□□□□□ -0.4
LINC00339-209ENST00000635450 LDLRAD2Q5SZI1 272 aa12.57□□□□□ -0.4
LINC00339-209ENST00000635450 OR10K2Q6IF99 312 aa12.57□□□□□ -0.4
LINC00339-209ENST00000635450 ZNF497Q6ZNH5 498 aa12.57□□□□□ -0.4
LINC00339-209ENST00000635450 OR10A7Q8NGE5 316 aa12.57□□□□□ -0.4
LINC00339-209ENST00000635450 CCDC107Q8WV48 283 aa12.57□□□□□ -0.4
LINC00339-209ENST00000635450 CREB3L1Q96BA8 519 aa12.57□□□□□ -0.4
LINC00339-209ENST00000635450 KIRREL1Q96J84 757 aa12.57□□□□□ -0.4
LINC00339-209ENST00000635450 NEDD4LQ96PU5 975 aa12.57□□□□□ -0.4
LINC00339-209ENST00000635450 URM1Q9BTM9 101 aaKnown RBP12.57□□□□□ -0.4
LINC00339-209ENST00000635450 C16orf95Q9H693 158 aa12.57□□□□□ -0.4
LINC00339-209ENST00000635450 RAB9BQ9NP90 201 aa12.57□□□□□ -0.4
LINC00339-209ENST00000635450 TRAPPC2LQ9UL33 140 aa12.57□□□□□ -0.4
LINC00339-209ENST00000635450 TRAV1-2A0A0B4J238 106 aa12.56□□□□□ -0.4
LINC00339-209ENST00000635450 TRAV39A0A0B4J263 110 aa12.56□□□□□ -0.4
LINC00339-209ENST00000635450 CA11O75493 328 aa12.56□□□□□ -0.4
LINC00339-209ENST00000635450 TSPAN9O75954 239 aa12.56□□□□□ -0.4
LINC00339-209ENST00000635450 MT-ND4P03905 459 aa12.56□□□□□ -0.4
LINC00339-209ENST00000635450 CD34P28906 385 aa12.56□□□□□ -0.4
LINC00339-209ENST00000635450 ARHGDIBP52566 201 aa12.56□□□□□ -0.4
LINC00339-209ENST00000635450 P2RY14Q15391 338 aa12.56□□□□□ -0.4
LINC00339-209ENST00000635450 LTC4SQ16873 150 aa12.56□□□□□ -0.4
LINC00339-209ENST00000635450 NKAPLQ5M9Q1 402 aa12.56□□□□□ -0.4
LINC00339-209ENST00000635450 CD200R1LQ6Q8B3 271 aa12.56□□□□□ -0.4
LINC00339-209ENST00000635450 BAIAP2L2Q6UXY1 529 aa12.56□□□□□ -0.4
LINC00339-209ENST00000635450 OR2W3Q7Z3T1 314 aa12.56□□□□□ -0.4
LINC00339-209ENST00000635450 OR4P4Q8NGL7 312 aa12.56□□□□□ -0.4
LINC00339-209ENST00000635450 RFESDQ8TAC1 157 aa12.56□□□□□ -0.4
LINC00339-209ENST00000635450 PIFOQ8TCI5 191 aa12.56□□□□□ -0.4
LINC00339-209ENST00000635450 GFI1Q99684 422 aa12.56□□□□□ -0.4
LINC00339-209ENST00000635450 ZNF286AQ9HBT8 521 aa12.56□□□□□ -0.4
LINC00339-209ENST00000635450 RAB18Q9NP72 206 aa12.56□□□□□ -0.4
LINC00339-209ENST00000635450 DPM3Q9P2X0 92 aa12.56□□□□□ -0.4
LINC00339-209ENST00000635450 HILPDAQ9Y5L2 63 aa12.56□□□□□ -0.4
LINC00339-209ENST00000635450 A0A087X0M5 115 aa12.55□□□□□ -0.4
LINC00339-209ENST00000635450 A0A1B0GX30 115 aa12.55□□□□□ -0.4
LINC00339-209ENST00000635450 UBE2QL1A1L167 161 aa12.55□□□□□ -0.4
LINC00339-209ENST00000635450 VGLL3A8MV65 326 aa12.55□□□□□ -0.4
LINC00339-209ENST00000635450 TMEM14DPA8MWL7 114 aa12.55□□□□□ -0.4
LINC00339-209ENST00000635450 LEUTXA8MZ59 168 aa12.55□□□□□ -0.4
LINC00339-209ENST00000635450 NPIPB11E5RHQ5 1161 aa12.55□□□□□ -0.4
LINC00339-209ENST00000635450 RRP9O43818 475 aaKnown RBP12.55□□□□□ -0.4
LINC00339-209ENST00000635450 JUNBP17275 347 aaPredicted RBP12.55□□□□□ -0.4
LINC00339-209ENST00000635450 SSTR5P35346 364 aa12.55□□□□□ -0.4
LINC00339-209ENST00000635450 CEACAM3P40198 252 aa12.55□□□□□ -0.4
LINC00339-209ENST00000635450 UNC119Q13432 240 aa12.55□□□□□ -0.4
LINC00339-209ENST00000635450 C6orf183Q5T699 404 aa12.55□□□□□ -0.4
LINC00339-209ENST00000635450 SYT6Q5T7P8 510 aaPredicted RBP12.55□□□□□ -0.4
LINC00339-209ENST00000635450 SIGIRRQ6IA17 410 aa12.55□□□□□ -0.4
LINC00339-209ENST00000635450 C22orf42Q6IC83 251 aa12.55□□□□□ -0.4
LINC00339-209ENST00000635450 OR9G1Q8NH87 305 aa12.55□□□□□ -0.4
LINC00339-209ENST00000635450 ARL11Q969Q4 196 aa12.55□□□□□ -0.4
LINC00339-209ENST00000635450 TM2D1Q9BX74 207 aa12.55□□□□□ -0.4
LINC00339-209ENST00000635450 KCNK15Q9H427 330 aa12.55□□□□□ -0.4
LINC00339-209ENST00000635450 LINC00574Q9H8X3 128 aa12.55□□□□□ -0.4
LINC00339-209ENST00000635450 STUB1Q9UNE7 303 aa12.55□□□□□ -0.4
LINC00339-209ENST00000635450 AMMECR1Q9Y4X0 333 aaPredicted RBP12.55□□□□□ -0.4
LINC00339-209ENST00000635450 M0QZ24 198 aa12.54□□□□□ -0.4
LINC00339-209ENST00000635450 ORC5O43913 435 aa12.54□□□□□ -0.4
LINC00339-209ENST00000635450 IGLV1-47P01700 117 aa12.54□□□□□ -0.4
LINC00339-209ENST00000635450 RAB3BP20337 219 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms