RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 MMP9P14780 707 aa10.41□□□□□ -0.74
PNKP-217ENST00000625216 GLRA1P23415 457 aa10.41□□□□□ -0.74
PNKP-217ENST00000625216 CEBPDP49716 269 aaPredicted RBP10.41□□□□□ -0.74
PNKP-217ENST00000625216 IKZF1Q13422 519 aa10.41□□□□□ -0.74
PNKP-217ENST00000625216 STUMQ69YW2 141 aa10.41□□□□□ -0.74
PNKP-217ENST00000625216 Q6P435 159 aa10.41□□□□□ -0.74
PNKP-217ENST00000625216 TRAPPC6BQ86SZ2 158 aa10.41□□□□□ -0.74
PNKP-217ENST00000625216 LINC00596Q86U02 117 aa10.41□□□□□ -0.74
PNKP-217ENST00000625216 FCAMRQ8WWV6 532 aa10.41□□□□□ -0.74
PNKP-217ENST00000625216 DYRK2Q92630 601 aa10.41□□□□□ -0.74
PNKP-217ENST00000625216 PCGF1Q9BSM1 259 aa10.41□□□□□ -0.74
PNKP-217ENST00000625216 SCPEP1Q9HB40 452 aa10.41□□□□□ -0.74
PNKP-217ENST00000625216 DNAJB11Q9UBS4 358 aa10.41□□□□□ -0.74
PNKP-217ENST00000625216 RPUSD1Q9UJJ7 312 aaKnown RBP10.41□□□□□ -0.74
PNKP-217ENST00000625216 HSF4Q9ULV5 492 aa10.41□□□□□ -0.74
PNKP-217ENST00000625216 KPTNQ9Y664 436 aa10.41□□□□□ -0.74
PNKP-217ENST00000625216 CA11O75493 328 aa10.4□□□□□ -0.74
PNKP-217ENST00000625216 TFF1P04155 84 aa10.4□□□□□ -0.74
PNKP-217ENST00000625216 FCER2P06734 321 aa10.4□□□□□ -0.74
PNKP-217ENST00000625216 GNG2P59768 71 aa10.4□□□□□ -0.74
PNKP-217ENST00000625216 ARF6P62330 175 aa10.4□□□□□ -0.74
PNKP-217ENST00000625216 SCN1BQ07699 218 aa10.4□□□□□ -0.74
PNKP-217ENST00000625216 ASAH1Q13510 395 aa10.4□□□□□ -0.74
PNKP-217ENST00000625216 KLF9Q13886 244 aaPredicted RBP10.4□□□□□ -0.74
PNKP-217ENST00000625216 ZNF146Q15072 292 aa10.4□□□□□ -0.74
PNKP-217ENST00000625216 SLC9A3R2Q15599 337 aa10.4□□□□□ -0.74
PNKP-217ENST00000625216 PNLIPRP3Q17RR3 467 aa10.4□□□□□ -0.74
PNKP-217ENST00000625216 LRRC10Q5BKY1 277 aa10.4□□□□□ -0.74
PNKP-217ENST00000625216 HACD4Q5VWC8 232 aa10.4□□□□□ -0.74
PNKP-217ENST00000625216 ZNF57Q68EA5 555 aaPredicted RBP10.4□□□□□ -0.74
PNKP-217ENST00000625216 BRICD5Q6PL45 260 aa10.4□□□□□ -0.74
PNKP-217ENST00000625216 POC5Q8NA72 575 aa10.4□□□□□ -0.74
PNKP-217ENST00000625216 LY6G5BQ8NDX9 201 aa10.4□□□□□ -0.74
PNKP-217ENST00000625216 ZDHHC16Q969W1 377 aa10.4□□□□□ -0.74
PNKP-217ENST00000625216 NEDD4LQ96PU5 975 aa10.4□□□□□ -0.74
PNKP-217ENST00000625216 TBX15Q96SF7 602 aa10.4□□□□□ -0.74
PNKP-217ENST00000625216 HDHD3Q9BSH5 251 aaPredicted RBP10.4□□□□□ -0.74
PNKP-217ENST00000625216 FAAP24Q9BTP7 215 aa10.4□□□□□ -0.74
PNKP-217ENST00000625216 C11orf54Q9H0W9 315 aaPredicted RBP10.4□□□□□ -0.74
PNKP-217ENST00000625216 SIRPDQ9H106 197 aa10.4□□□□□ -0.74
PNKP-217ENST00000625216 RASL12Q9NYN1 266 aa10.4□□□□□ -0.74
PNKP-217ENST00000625216 MTFP1Q9UDX5 166 aa10.4□□□□□ -0.74
PNKP-217ENST00000625216 ANAPC10Q9UM13 185 aa10.4□□□□□ -0.74
PNKP-217ENST00000625216 TRAV24A0A0B4J272 114 aa10.39□□□□□ -0.75
PNKP-217ENST00000625216 CENPVL3A0A0U1RRI6 287 aa10.39□□□□□ -0.75
PNKP-217ENST00000625216 ANKRD20A5PA0PJZ0 165 aa10.39□□□□□ -0.75
PNKP-217ENST00000625216 NKX6-3A6NJ46 265 aa10.39□□□□□ -0.75
PNKP-217ENST00000625216 SERPINE3A8MV23 424 aa10.39□□□□□ -0.75
PNKP-217ENST00000625216 FCN3O75636 299 aa10.39□□□□□ -0.75
PNKP-217ENST00000625216 OR2H2O95918 312 aa10.39□□□□□ -0.75
PNKP-217ENST00000625216 KNG1P01042 644 aa10.39□□□□□ -0.75
PNKP-217ENST00000625216 AMY2BP19961 511 aa10.39□□□□□ -0.75
PNKP-217ENST00000625216 FUT3P21217 361 aa10.39□□□□□ -0.75
PNKP-217ENST00000625216 INPP1P49441 399 aa10.39□□□□□ -0.75
PNKP-217ENST00000625216 IL13RA1P78552 427 aa10.39□□□□□ -0.75
PNKP-217ENST00000625216 ARFRP1Q13795 201 aa10.39□□□□□ -0.75
PNKP-217ENST00000625216 DEFB112Q30KQ8 113 aa10.39□□□□□ -0.75
PNKP-217ENST00000625216 SMIM21Q3B7S5 101 aa10.39□□□□□ -0.75
PNKP-217ENST00000625216 AWAT1Q58HT5 328 aa10.39□□□□□ -0.75
PNKP-217ENST00000625216 SPIN3Q5JUX0 258 aa10.39□□□□□ -0.75
PNKP-217ENST00000625216 ATAD3CQ5T2N8 411 aa10.39□□□□□ -0.75
PNKP-217ENST00000625216 BRD3OSQ6XYD6 125 aa10.39□□□□□ -0.75
PNKP-217ENST00000625216 Q6ZPA2 131 aa10.39□□□□□ -0.75
PNKP-217ENST00000625216 ZNF788Q6ZQV5 615 aa10.39□□□□□ -0.75
PNKP-217ENST00000625216 TMEM86BQ8N661 226 aa10.39□□□□□ -0.75
PNKP-217ENST00000625216 KIR3DL3Q8N743 410 aa10.39□□□□□ -0.75
PNKP-217ENST00000625216 GVQW1Q8N7I0 195 aa10.39□□□□□ -0.75
PNKP-217ENST00000625216 OR5T2Q8NGG2 359 aa10.39□□□□□ -0.75
PNKP-217ENST00000625216 ANGPTL6Q8NI99 470 aa10.39□□□□□ -0.75
PNKP-217ENST00000625216 SETD6Q8TBK2 473 aa10.39□□□□□ -0.75
PNKP-217ENST00000625216 IFT22Q9H7X7 185 aa10.39□□□□□ -0.75
PNKP-217ENST00000625216 PLEKHJ1Q9NW61 149 aa10.39□□□□□ -0.75
PNKP-217ENST00000625216 OR14J1Q9UGF5 321 aa10.39□□□□□ -0.75
PNKP-217ENST00000625216 AK3Q9UIJ7 227 aa10.39□□□□□ -0.75
PNKP-217ENST00000625216 TENM1Q9UKZ4 2725 aa10.39□□□□□ -0.75
PNKP-217ENST00000625216 NBEAL1Q6ZS30 2694 aa10.39□□□□□ -0.75
PNKP-217ENST00000625216 DOCK11Q5JSL3 2073 aa10.38□□□□□ -0.75
PNKP-217ENST00000625216 IGHV1-69DA0A0B4J2H0 117 aa10.38□□□□□ -0.75
PNKP-217ENST00000625216 UBE2QL1A1L167 161 aa10.38□□□□□ -0.75
PNKP-217ENST00000625216 OR2AT4A6NND4 320 aa10.38□□□□□ -0.75
PNKP-217ENST00000625216 SIRPB1O00241 398 aa10.38□□□□□ -0.75
PNKP-217ENST00000625216 HSPB6O14558 160 aa10.38□□□□□ -0.75
PNKP-217ENST00000625216 SIGLEC5O15389 551 aa10.38□□□□□ -0.75
PNKP-217ENST00000625216 RBBP9O75884 186 aa10.38□□□□□ -0.75
PNKP-217ENST00000625216 HAND1O96004 215 aa10.38□□□□□ -0.75
PNKP-217ENST00000625216 IGHV1-69P01742 117 aa10.38□□□□□ -0.75
PNKP-217ENST00000625216 ZNF44P15621 663 aa10.38□□□□□ -0.75
PNKP-217ENST00000625216 SPNP16150 400 aa10.38□□□□□ -0.75
PNKP-217ENST00000625216 BTCP35070 178 aa10.38□□□□□ -0.75
PNKP-217ENST00000625216 RCVRNP35243 200 aa10.38□□□□□ -0.75
PNKP-217ENST00000625216 RFX2P48378 723 aa10.38□□□□□ -0.75
PNKP-217ENST00000625216 ARL6IP1Q15041 203 aa10.38□□□□□ -0.75
PNKP-217ENST00000625216 RGS21Q2M5E4 152 aa10.38□□□□□ -0.75
PNKP-217ENST00000625216 FIP1L1Q6UN15 594 aaKnown RBP10.38□□□□□ -0.75
PNKP-217ENST00000625216 Q6YL49 198 aa10.38□□□□□ -0.75
PNKP-217ENST00000625216 C1orf122Q6ZSJ8 110 aa10.38□□□□□ -0.75
PNKP-217ENST00000625216 TOMM5Q8N4H5 51 aa10.38□□□□□ -0.75
PNKP-217ENST00000625216 FAM216BQ8N7L0 139 aa10.38□□□□□ -0.75
PNKP-217ENST00000625216 SUMF2Q8NBJ7 301 aa10.38□□□□□ -0.75
PNKP-217ENST00000625216 SGMS2Q8NHU3 365 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms