RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.76□□□□□ -2.13
CDKL5-207ENST00000624700 FAAP24Q9BTP7 215 aa1.76□□□□□ -2.13
CDKL5-207ENST00000624700 PRRG3Q9BZD7 231 aa1.76□□□□□ -2.13
CDKL5-207ENST00000624700 KCNIP2Q9NS61 270 aa1.76□□□□□ -2.13
CDKL5-207ENST00000624700 COMMD9Q9P000 198 aa1.76□□□□□ -2.13
CDKL5-207ENST00000624700 LINC00588Q9Y4M8 146 aa1.76□□□□□ -2.13
CDKL5-207ENST00000624700 PHLDA3Q9Y5J5 127 aa1.76□□□□□ -2.13
CDKL5-207ENST00000624700 DNMT1P26358 1616 aaKnown RBP1.76□□□□□ -2.13
CDKL5-207ENST00000624700 OTOFQ9HC10 1997 aa1.76□□□□□ -2.13
CDKL5-207ENST00000624700 SETXQ7Z333 2677 aaKnown RBP1.75□□□□□ -2.13
CDKL5-207ENST00000624700 RAB3GAP2Q9H2M9 1393 aa1.75□□□□□ -2.13
CDKL5-207ENST00000624700 ABCB11O95342 1321 aa1.75□□□□□ -2.13
CDKL5-207ENST00000624700 J3QKU1 62 aa1.75□□□□□ -2.13
CDKL5-207ENST00000624700 FGF16O43320 207 aa1.75□□□□□ -2.13
CDKL5-207ENST00000624700 CYTH3O43739 400 aa1.75□□□□□ -2.13
CDKL5-207ENST00000624700 SHOX2O60902 331 aaPredicted RBP1.75□□□□□ -2.13
CDKL5-207ENST00000624700 CRTAPO75718 401 aaPredicted RBP1.75□□□□□ -2.13
CDKL5-207ENST00000624700 NQO2P16083 231 aa1.75□□□□□ -2.13
CDKL5-207ENST00000624700 ETV1P50549 477 aa1.75□□□□□ -2.13
CDKL5-207ENST00000624700 USF2Q15853 346 aaPredicted RBP1.75□□□□□ -2.13
CDKL5-207ENST00000624700 ACSBG2Q5FVE4 666 aa1.75□□□□□ -2.13
CDKL5-207ENST00000624700 SSX7Q7RTT5 188 aa1.75□□□□□ -2.13
CDKL5-207ENST00000624700 GATD1Q8NB37 220 aa1.75□□□□□ -2.13
CDKL5-207ENST00000624700 OR4A5Q8NH83 315 aa1.75□□□□□ -2.13
CDKL5-207ENST00000624700 OR2V1Q8NHB1 315 aa1.75□□□□□ -2.13
CDKL5-207ENST00000624700 PDCD6IPQ8WUM4 868 aaKnown RBP1.75□□□□□ -2.13
CDKL5-207ENST00000624700 TAPBPLQ9BX59 468 aa1.75□□□□□ -2.13
CDKL5-207ENST00000624700 TMEM106BQ9NUM4 274 aa1.75□□□□□ -2.13
CDKL5-207ENST00000624700 SLC23A2Q9UGH3 650 aa1.75□□□□□ -2.13
CDKL5-207ENST00000624700 TBL2Q9Y4P3 447 aaKnown RBP1.75□□□□□ -2.13
CDKL5-207ENST00000624700 STRCP1A6NGW2 1772 aa1.75□□□□□ -2.13
CDKL5-207ENST00000624700 CHD8Q9HCK8 2581 aa1.74□□□□□ -2.13
CDKL5-207ENST00000624700 PHYHO14832 338 aa1.74□□□□□ -2.13
CDKL5-207ENST00000624700 LECT2O14960 151 aa1.74□□□□□ -2.13
CDKL5-207ENST00000624700 UGT2B11O75310 529 aa1.74□□□□□ -2.13
CDKL5-207ENST00000624700 SNAP29O95721 258 aa1.74□□□□□ -2.13
CDKL5-207ENST00000624700 OR12D1P0DN82 309 aa1.74□□□□□ -2.13
CDKL5-207ENST00000624700 ZNF22P17026 224 aaPredicted RBP1.74□□□□□ -2.13
CDKL5-207ENST00000624700 CSRP1P21291 193 aaKnown RBP1.74□□□□□ -2.13
CDKL5-207ENST00000624700 EVI2BP34910 448 aa1.74□□□□□ -2.13
CDKL5-207ENST00000624700 MP68P56378 58 aa1.74□□□□□ -2.13
CDKL5-207ENST00000624700 UBE2KP61086 200 aa1.74□□□□□ -2.13
CDKL5-207ENST00000624700 STX3Q13277 289 aa1.74□□□□□ -2.13
CDKL5-207ENST00000624700 APOFQ13790 326 aa1.74□□□□□ -2.13
CDKL5-207ENST00000624700 OR4D1Q15615 310 aa1.74□□□□□ -2.13
CDKL5-207ENST00000624700 NOXRED1Q6NXP6 359 aa1.74□□□□□ -2.13
CDKL5-207ENST00000624700 AHSA2Q719I0 299 aa1.74□□□□□ -2.13
CDKL5-207ENST00000624700 ZNF767PQ75MW2 155 aa1.74□□□□□ -2.13
CDKL5-207ENST00000624700 Q8NDZ9 215 aa1.74□□□□□ -2.13
CDKL5-207ENST00000624700 OR10D4PQ8NGN7 298 aa1.74□□□□□ -2.13
CDKL5-207ENST00000624700 GALMQ96C23 342 aa1.74□□□□□ -2.13
CDKL5-207ENST00000624700 DDIT4LQ96D03 193 aa1.74□□□□□ -2.13
CDKL5-207ENST00000624700 MRAP2Q96G30 205 aa1.74□□□□□ -2.13
CDKL5-207ENST00000624700 PGLYRP3Q96LB9 341 aa1.74□□□□□ -2.13
CDKL5-207ENST00000624700 HBEGFQ99075 208 aa1.74□□□□□ -2.13
CDKL5-207ENST00000624700 ALX4Q9H161 411 aaPredicted RBP1.74□□□□□ -2.13
CDKL5-207ENST00000624700 IFT46Q9NQC8 304 aa1.74□□□□□ -2.13
CDKL5-207ENST00000624700 BTRCQ9Y297 605 aa1.74□□□□□ -2.13
CDKL5-207ENST00000624700 COL5A3P25940 1745 aaPredicted RBP1.74□□□□□ -2.13
CDKL5-207ENST00000624700 TRPM3Q9HCF6 1732 aaPredicted RBP1.74□□□□□ -2.13
CDKL5-207ENST00000624700 SYNRGQ9UMZ2 1314 aa1.73□□□□□ -2.13
CDKL5-207ENST00000624700 A0A1B0GTI1 187 aa1.73□□□□□ -2.13
CDKL5-207ENST00000624700 SLC25A20O43772 301 aa1.73□□□□□ -2.13
CDKL5-207ENST00000624700 LTAP01374 205 aa1.73□□□□□ -2.13
CDKL5-207ENST00000624700 FBP1P09467 338 aa1.73□□□□□ -2.13
CDKL5-207ENST00000624700 RCVRNP35243 200 aa1.73□□□□□ -2.13
CDKL5-207ENST00000624700 SPAM1P38567 509 aa1.73□□□□□ -2.13
CDKL5-207ENST00000624700 AKR1C2P52895 323 aa1.73□□□□□ -2.13
CDKL5-207ENST00000624700 ZNF181Q2M3W8 571 aa1.73□□□□□ -2.13
CDKL5-207ENST00000624700 TMEM249Q2WGJ8 235 aa1.73□□□□□ -2.13
CDKL5-207ENST00000624700 NIPAL1Q6NVV3 410 aa1.73□□□□□ -2.13
CDKL5-207ENST00000624700 SPERTQ8NA61 448 aa1.73□□□□□ -2.13
CDKL5-207ENST00000624700 OR11G2Q8NGC1 345 aa1.73□□□□□ -2.13
CDKL5-207ENST00000624700 CD200R1Q8TD46 325 aa1.73□□□□□ -2.13
CDKL5-207ENST00000624700 LMX1AQ8TE12 382 aa1.73□□□□□ -2.13
CDKL5-207ENST00000624700 RORBQ92753 470 aa1.73□□□□□ -2.13
CDKL5-207ENST00000624700 UGT2B28Q9BY64 529 aa1.73□□□□□ -2.13
CDKL5-207ENST00000624700 SNX24Q9Y343 169 aa1.73□□□□□ -2.13
CDKL5-207ENST00000624700 ZNF337Q9Y3M9 751 aa1.73□□□□□ -2.13
CDKL5-207ENST00000624700 URGCP-MRPS24S4R325 110 aa1.73□□□□□ -2.13
CDKL5-207ENST00000624700 SHANK3Q9BYB0 1731 aa1.72□□□□□ -2.13
CDKL5-207ENST00000624700 ADAMTS7Q9UKP4 1686 aa1.72□□□□□ -2.13
CDKL5-207ENST00000624700 C17orf51A8MQB3 221 aa1.72□□□□□ -2.13
CDKL5-207ENST00000624700 A8MWP6 167 aa1.72□□□□□ -2.13
CDKL5-207ENST00000624700 F5H5T6 163 aa1.72□□□□□ -2.13
CDKL5-207ENST00000624700 SGCEO43556 437 aa1.72□□□□□ -2.13
CDKL5-207ENST00000624700 SKP2Q13309 424 aa1.72□□□□□ -2.13
CDKL5-207ENST00000624700 ZBTB8OSQ8IWT0 167 aa1.72□□□□□ -2.13
CDKL5-207ENST00000624700 MUC15Q8N387 334 aa1.72□□□□□ -2.13
CDKL5-207ENST00000624700 OR10P1Q8NGE3 313 aa1.72□□□□□ -2.13
CDKL5-207ENST00000624700 OR5P2Q8WZ92 322 aa1.72□□□□□ -2.13
CDKL5-207ENST00000624700 KLF6Q99612 283 aaPredicted RBP1.72□□□□□ -2.13
CDKL5-207ENST00000624700 TAS2R13Q9NYV9 303 aa1.72□□□□□ -2.13
CDKL5-207ENST00000624700 CHMP5Q9NZZ3 219 aa1.72□□□□□ -2.13
CDKL5-207ENST00000624700 MRM2Q9UI43 246 aaKnown RBP1.72□□□□□ -2.13
CDKL5-207ENST00000624700 CUL9Q8IWT3 2517 aa1.71□□□□□ -2.14
CDKL5-207ENST00000624700 ZNF462Q96JM2 2506 aa1.71□□□□□ -2.14
CDKL5-207ENST00000624700 TOR1AO14656 332 aa1.71□□□□□ -2.14
CDKL5-207ENST00000624700 YKT6O15498 198 aa1.71□□□□□ -2.14
CDKL5-207ENST00000624700 ACTR1BP42025 376 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms