RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 RCC2Q9P258 522 aaKnown RBP11.32□□□□□ -0.6
PCDHGC3-208ENST00000622836 V9GY05 133 aa11.32□□□□□ -0.6
PCDHGC3-208ENST00000622836 SLC17A2O00624 439 aa11.31□□□□□ -0.6
PCDHGC3-208ENST00000622836 PDCD6O75340 191 aa11.31□□□□□ -0.6
PCDHGC3-208ENST00000622836 BPNT1O95861 308 aa11.31□□□□□ -0.6
PCDHGC3-208ENST00000622836 IGHV3-7P01780 117 aa11.31□□□□□ -0.6
PCDHGC3-208ENST00000622836 ARHGDIBP52566 201 aa11.31□□□□□ -0.6
PCDHGC3-208ENST00000622836 RPS27AP62979 156 aaKnown RBP11.31□□□□□ -0.6
PCDHGC3-208ENST00000622836 KCTD21Q4G0X4 260 aa11.31□□□□□ -0.6
PCDHGC3-208ENST00000622836 C22orf42Q6IC83 251 aa11.31□□□□□ -0.6
PCDHGC3-208ENST00000622836 ZNF497Q6ZNH5 498 aa11.31□□□□□ -0.6
PCDHGC3-208ENST00000622836 DYNAPQ8N1N2 210 aa11.31□□□□□ -0.6
PCDHGC3-208ENST00000622836 OR4P4Q8NGL7 312 aa11.31□□□□□ -0.6
PCDHGC3-208ENST00000622836 OR4K15Q8NH41 348 aa11.31□□□□□ -0.6
PCDHGC3-208ENST00000622836 ARL11Q969Q4 196 aa11.31□□□□□ -0.6
PCDHGC3-208ENST00000622836 CREB3L1Q96BA8 519 aa11.31□□□□□ -0.6
PCDHGC3-208ENST00000622836 GFI1Q99684 422 aa11.31□□□□□ -0.6
PCDHGC3-208ENST00000622836 RAB18Q9NP72 206 aa11.31□□□□□ -0.6
PCDHGC3-208ENST00000622836 RAB9BQ9NP90 201 aa11.31□□□□□ -0.6
PCDHGC3-208ENST00000622836 DPM3Q9P2X0 92 aa11.31□□□□□ -0.6
PCDHGC3-208ENST00000622836 A0A1B0GUS0 222 aa11.3□□□□□ -0.6
PCDHGC3-208ENST00000622836 TRDV1A0A1B0GX56 115 aa11.3□□□□□ -0.6
PCDHGC3-208ENST00000622836 LEUTXA8MZ59 168 aa11.3□□□□□ -0.6
PCDHGC3-208ENST00000622836 F2RL2O00254 374 aa11.3□□□□□ -0.6
PCDHGC3-208ENST00000622836 NDUFA7O95182 113 aa11.3□□□□□ -0.6
PCDHGC3-208ENST00000622836 MT-ND4P03905 459 aa11.3□□□□□ -0.6
PCDHGC3-208ENST00000622836 GLAP06280 429 aa11.3□□□□□ -0.6
PCDHGC3-208ENST00000622836 CGB3P0DN86 165 aa11.3□□□□□ -0.6
PCDHGC3-208ENST00000622836 CGB7P0DN87 165 aa11.3□□□□□ -0.6
PCDHGC3-208ENST00000622836 CD34P28906 385 aa11.3□□□□□ -0.6
PCDHGC3-208ENST00000622836 CEACAM3P40198 252 aa11.3□□□□□ -0.6
PCDHGC3-208ENST00000622836 GNG10P50151 68 aa11.3□□□□□ -0.6
PCDHGC3-208ENST00000622836 RAB13P51153 203 aa11.3□□□□□ -0.6
PCDHGC3-208ENST00000622836 CLDN12P56749 244 aa11.3□□□□□ -0.6
PCDHGC3-208ENST00000622836 RELBQ01201 579 aa11.3□□□□□ -0.6
PCDHGC3-208ENST00000622836 NEDD8Q15843 81 aa11.3□□□□□ -0.6
PCDHGC3-208ENST00000622836 HLA-DRB5Q30154 266 aa11.3□□□□□ -0.6
PCDHGC3-208ENST00000622836 SYT6Q5T7P8 510 aaPredicted RBP11.3□□□□□ -0.6
PCDHGC3-208ENST00000622836 HES5Q5TA89 166 aa11.3□□□□□ -0.6
PCDHGC3-208ENST00000622836 CD200R1LQ6Q8B3 271 aa11.3□□□□□ -0.6
PCDHGC3-208ENST00000622836 PRR18Q8N4B5 295 aa11.3□□□□□ -0.6
PCDHGC3-208ENST00000622836 OR10A7Q8NGE5 316 aa11.3□□□□□ -0.6
PCDHGC3-208ENST00000622836 OR51D1Q8NGF3 324 aa11.3□□□□□ -0.6
PCDHGC3-208ENST00000622836 OR9G1Q8NH87 305 aa11.3□□□□□ -0.6
PCDHGC3-208ENST00000622836 UBALD1Q8TB05 177 aa11.3□□□□□ -0.6
PCDHGC3-208ENST00000622836 LEAP2Q969E1 77 aa11.3□□□□□ -0.6
PCDHGC3-208ENST00000622836 URM1Q9BTM9 101 aaKnown RBP11.3□□□□□ -0.6
PCDHGC3-208ENST00000622836 AMMECR1Q9Y4X0 333 aaPredicted RBP11.3□□□□□ -0.6
PCDHGC3-208ENST00000622836 A0A087X0M5 115 aa11.29□□□□□ -0.6
PCDHGC3-208ENST00000622836 TRAV1-2A0A0B4J238 106 aa11.29□□□□□ -0.6
PCDHGC3-208ENST00000622836 A0A1B0GX30 115 aa11.29□□□□□ -0.6
PCDHGC3-208ENST00000622836 POM121CA8CG34 1229 aa11.29□□□□□ -0.6
PCDHGC3-208ENST00000622836 VGLL3A8MV65 326 aa11.29□□□□□ -0.6
PCDHGC3-208ENST00000622836 TMEM14DPA8MWL7 114 aa11.29□□□□□ -0.6
PCDHGC3-208ENST00000622836 NPIPB11E5RHQ5 1161 aa11.29□□□□□ -0.6
PCDHGC3-208ENST00000622836 SDCBPO00560 298 aaPredicted RBP11.29□□□□□ -0.6
PCDHGC3-208ENST00000622836 ORC5O43913 435 aa11.29□□□□□ -0.6
PCDHGC3-208ENST00000622836 CA11O75493 328 aa11.29□□□□□ -0.6
PCDHGC3-208ENST00000622836 RAB3BP20337 219 aa11.29□□□□□ -0.6
PCDHGC3-208ENST00000622836 GALP22466 123 aa11.29□□□□□ -0.6
PCDHGC3-208ENST00000622836 BLVRBP30043 206 aaPredicted RBP11.29□□□□□ -0.6
PCDHGC3-208ENST00000622836 UNC119Q13432 240 aa11.29□□□□□ -0.6
PCDHGC3-208ENST00000622836 LDLRAD2Q5SZI1 272 aa11.29□□□□□ -0.6
PCDHGC3-208ENST00000622836 C6orf183Q5T699 404 aa11.29□□□□□ -0.6
PCDHGC3-208ENST00000622836 SIGIRRQ6IA17 410 aa11.29□□□□□ -0.6
PCDHGC3-208ENST00000622836 LIAT1Q6ZQX7 453 aa11.29□□□□□ -0.6
PCDHGC3-208ENST00000622836 OR2W3Q7Z3T1 314 aa11.29□□□□□ -0.6
PCDHGC3-208ENST00000622836 FAM3DQ96BQ1 224 aa11.29□□□□□ -0.6
PCDHGC3-208ENST00000622836 NICN1Q9BSH3 213 aa11.29□□□□□ -0.6
PCDHGC3-208ENST00000622836 MMP28Q9H239 520 aa11.29□□□□□ -0.6
PCDHGC3-208ENST00000622836 CHMP1AQ9HD42 196 aaPredicted RBP11.29□□□□□ -0.6
PCDHGC3-208ENST00000622836 PLEKHJ1Q9NW61 149 aa11.29□□□□□ -0.6
PCDHGC3-208ENST00000622836 KCNIP1Q9NZI2 227 aa11.29□□□□□ -0.6
PCDHGC3-208ENST00000622836 STEAP1Q9UHE8 339 aa11.29□□□□□ -0.6
PCDHGC3-208ENST00000622836 PITPNC1Q9UKF7 332 aa11.29□□□□□ -0.6
PCDHGC3-208ENST00000622836 STUB1Q9UNE7 303 aa11.29□□□□□ -0.6
PCDHGC3-208ENST00000622836 SSR3Q9UNL2 185 aa11.29□□□□□ -0.6
PCDHGC3-208ENST00000622836 CLPSL1A2RUU4 121 aa11.28□□□□□ -0.6
PCDHGC3-208ENST00000622836 BUB1B-PAK6H3BSN5 160 aa11.28□□□□□ -0.6
PCDHGC3-208ENST00000622836 J3QR06 171 aa11.28□□□□□ -0.6
PCDHGC3-208ENST00000622836 SPINT2O43291 252 aa11.28□□□□□ -0.6
PCDHGC3-208ENST00000622836 IGLV1-47P01700 117 aa11.28□□□□□ -0.6
PCDHGC3-208ENST00000622836 CD37P11049 281 aa11.28□□□□□ -0.6
PCDHGC3-208ENST00000622836 JUNBP17275 347 aaPredicted RBP11.28□□□□□ -0.6
PCDHGC3-208ENST00000622836 BRS3P32247 399 aa11.28□□□□□ -0.6
PCDHGC3-208ENST00000622836 OR10A3P58181 314 aa11.28□□□□□ -0.6
PCDHGC3-208ENST00000622836 OLFML2AQ68BL7 652 aa11.28□□□□□ -0.6
PCDHGC3-208ENST00000622836 TRAT1Q6PIZ9 186 aa11.28□□□□□ -0.6
PCDHGC3-208ENST00000622836 Q6ZSV7 163 aa11.28□□□□□ -0.6
PCDHGC3-208ENST00000622836 C6orf201Q7Z4U5 140 aa11.28□□□□□ -0.6
PCDHGC3-208ENST00000622836 OR4C13Q8NGP0 309 aa11.28□□□□□ -0.6
PCDHGC3-208ENST00000622836 RPEQ96AT9 228 aa11.28□□□□□ -0.6
PCDHGC3-208ENST00000622836 FAAP24Q9BTP7 215 aa11.28□□□□□ -0.6
PCDHGC3-208ENST00000622836 ZNF747Q9BV97 191 aa11.28□□□□□ -0.6
PCDHGC3-208ENST00000622836 TM2D1Q9BX74 207 aa11.28□□□□□ -0.6
PCDHGC3-208ENST00000622836 LINC00574Q9H8X3 128 aa11.28□□□□□ -0.6
PCDHGC3-208ENST00000622836 VCX3AQ9NNX9 186 aa11.28□□□□□ -0.6
PCDHGC3-208ENST00000622836 PSG11Q9UQ72 335 aa11.28□□□□□ -0.6
PCDHGC3-208ENST00000622836 TCF19Q9Y242 345 aa11.28□□□□□ -0.6
PCDHGC3-208ENST00000622836 RNF114Q9Y508 228 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms