RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 RCC2Q9P258 522 aaKnown RBP9.33□□□□□ -0.92
CCDC12-209ENST00000604164 A6NDX4 124 aa9.32□□□□□ -0.92
CCDC12-209ENST00000604164 NPIPB11E5RHQ5 1161 aa9.32□□□□□ -0.92
CCDC12-209ENST00000604164 BUB1B-PAK6H3BSN5 160 aa9.32□□□□□ -0.92
CCDC12-209ENST00000604164 M0QZ24 198 aa9.32□□□□□ -0.92
CCDC12-209ENST00000604164 SPINT2O43291 252 aa9.32□□□□□ -0.92
CCDC12-209ENST00000604164 BPNT1O95861 308 aa9.32□□□□□ -0.92
CCDC12-209ENST00000604164 HTR2CP28335 458 aa9.32□□□□□ -0.92
CCDC12-209ENST00000604164 PROK1P58294 105 aa9.32□□□□□ -0.92
CCDC12-209ENST00000604164 C1orf100Q5SVJ3 147 aa9.32□□□□□ -0.92
CCDC12-209ENST00000604164 C6orf183Q5T699 404 aa9.32□□□□□ -0.92
CCDC12-209ENST00000604164 RAB12Q6IQ22 244 aa9.32□□□□□ -0.92
CCDC12-209ENST00000604164 ZNF497Q6ZNH5 498 aa9.32□□□□□ -0.92
CCDC12-209ENST00000604164 LRRTM1Q86UE6 522 aa9.32□□□□□ -0.92
CCDC12-209ENST00000604164 LYPD6Q86Y78 171 aa9.32□□□□□ -0.92
CCDC12-209ENST00000604164 DYNAPQ8N1N2 210 aa9.32□□□□□ -0.92
CCDC12-209ENST00000604164 OR52M1Q8NGK5 317 aa9.32□□□□□ -0.92
CCDC12-209ENST00000604164 OR6M1Q8NGM8 313 aa9.32□□□□□ -0.92
CCDC12-209ENST00000604164 PIFOQ8TCI5 191 aa9.32□□□□□ -0.92
CCDC12-209ENST00000604164 SGCDQ92629 289 aa9.32□□□□□ -0.92
CCDC12-209ENST00000604164 TMEM203Q969S6 136 aa9.32□□□□□ -0.92
CCDC12-209ENST00000604164 RPEQ96AT9 228 aa9.32□□□□□ -0.92
CCDC12-209ENST00000604164 Q96M66 194 aa9.32□□□□□ -0.92
CCDC12-209ENST00000604164 NEDD4LQ96PU5 975 aa9.32□□□□□ -0.92
CCDC12-209ENST00000604164 CITED1Q99966 193 aa9.32□□□□□ -0.92
CCDC12-209ENST00000604164 PRSS22Q9GZN4 317 aa9.32□□□□□ -0.92
CCDC12-209ENST00000604164 MMP28Q9H239 520 aa9.32□□□□□ -0.92
CCDC12-209ENST00000604164 BANF2Q9H503 90 aa9.32□□□□□ -0.92
CCDC12-209ENST00000604164 ZNF286AQ9HBT8 521 aa9.32□□□□□ -0.92
CCDC12-209ENST00000604164 ETAA1Q9NY74 926 aa9.32□□□□□ -0.92
CCDC12-209ENST00000604164 TRAPPC2LQ9UL33 140 aa9.32□□□□□ -0.92
CCDC12-209ENST00000604164 PEX16Q9Y5Y5 336 aa9.32□□□□□ -0.92
CCDC12-209ENST00000604164 A0A1W2PP11 408 aa9.31□□□□□ -0.92
CCDC12-209ENST00000604164 J3QR06 171 aa9.31□□□□□ -0.92
CCDC12-209ENST00000604164 DENRO43583 198 aaKnown RBP9.31□□□□□ -0.92
CCDC12-209ENST00000604164 PDCD6O75340 191 aa9.31□□□□□ -0.92
CCDC12-209ENST00000604164 MT-ND4P03905 459 aa9.31□□□□□ -0.92
CCDC12-209ENST00000604164 FAM106CPP0CH98 169 aa9.31□□□□□ -0.92
CCDC12-209ENST00000604164 MADCAM1Q13477 382 aa9.31□□□□□ -0.92
CCDC12-209ENST00000604164 INSL4Q14641 139 aa9.31□□□□□ -0.92
CCDC12-209ENST00000604164 Q3ZCU0 254 aa9.31□□□□□ -0.92
CCDC12-209ENST00000604164 TPTE2P1Q5T6R2 138 aa9.31□□□□□ -0.92
CCDC12-209ENST00000604164 FAM27D1Q5T7N8 215 aa9.31□□□□□ -0.92
CCDC12-209ENST00000604164 ZNF554Q86TJ5 538 aa9.31□□□□□ -0.92
CCDC12-209ENST00000604164 OR10X1Q8NGY0 326 aa9.31□□□□□ -0.92
CCDC12-209ENST00000604164 FCGR1BQ92637 280 aa9.31□□□□□ -0.92
CCDC12-209ENST00000604164 TOMM40LQ969M1 308 aa9.31□□□□□ -0.92
CCDC12-209ENST00000604164 ARL11Q969Q4 196 aa9.31□□□□□ -0.92
CCDC12-209ENST00000604164 TMEM59Q9BXS4 323 aa9.31□□□□□ -0.92
CCDC12-209ENST00000604164 PLGRKTQ9HBL7 147 aa9.31□□□□□ -0.92
CCDC12-209ENST00000604164 KCNIP1Q9NZI2 227 aa9.31□□□□□ -0.92
CCDC12-209ENST00000604164 LRRC42Q9Y546 428 aa9.31□□□□□ -0.92
CCDC12-209ENST00000604164 FAM172BPA6NC97 362 aa9.3□□□□□ -0.92
CCDC12-209ENST00000604164 M0QZK8 103 aa9.3□□□□□ -0.92
CCDC12-209ENST00000604164 SDCBPO00560 298 aaPredicted RBP9.3□□□□□ -0.92
CCDC12-209ENST00000604164 PDCD5O14737 125 aa9.3□□□□□ -0.92
CCDC12-209ENST00000604164 SLC22A1O15245 554 aa9.3□□□□□ -0.92
CCDC12-209ENST00000604164 PEX14O75381 377 aa9.3□□□□□ -0.92
CCDC12-209ENST00000604164 MPIG6BO95866 241 aa9.3□□□□□ -0.92
CCDC12-209ENST00000604164 LPLP06858 475 aa9.3□□□□□ -0.92
CCDC12-209ENST00000604164 CD37P11049 281 aa9.3□□□□□ -0.92
CCDC12-209ENST00000604164 GALP22466 123 aa9.3□□□□□ -0.92
CCDC12-209ENST00000604164 PAX6P26367 422 aa9.3□□□□□ -0.92
CCDC12-209ENST00000604164 IL3RAP26951 378 aa9.3□□□□□ -0.92
CCDC12-209ENST00000604164 SSTR5P35346 364 aa9.3□□□□□ -0.92
CCDC12-209ENST00000604164 GDNFP39905 211 aa9.3□□□□□ -0.92
CCDC12-209ENST00000604164 MAP2K4P45985 399 aa9.3□□□□□ -0.92
CCDC12-209ENST00000604164 RAB7AP51149 207 aa9.3□□□□□ -0.92
CCDC12-209ENST00000604164 RAB13P51153 203 aa9.3□□□□□ -0.92
CCDC12-209ENST00000604164 RPS25P62851 125 aaKnown RBP9.3□□□□□ -0.92
CCDC12-209ENST00000604164 ARSJQ5FYB0 599 aaPredicted RBP9.3□□□□□ -0.92
CCDC12-209ENST00000604164 LDLRAD2Q5SZI1 272 aa9.3□□□□□ -0.92
CCDC12-209ENST00000604164 Q6ZTK2 550 aa9.3□□□□□ -0.92
CCDC12-209ENST00000604164 OR2W3Q7Z3T1 314 aa9.3□□□□□ -0.92
CCDC12-209ENST00000604164 OR8H3Q8N146 312 aa9.3□□□□□ -0.92
CCDC12-209ENST00000604164 Q8N2B8 174 aa9.3□□□□□ -0.92
CCDC12-209ENST00000604164 C8orf31Q8N9H6 132 aa9.3□□□□□ -0.92
CCDC12-209ENST00000604164 TMEM104Q8NE00 496 aa9.3□□□□□ -0.92
CCDC12-209ENST00000604164 RFESDQ8TAC1 157 aa9.3□□□□□ -0.92
CCDC12-209ENST00000604164 FAM46BQ96A09 425 aa9.3□□□□□ -0.92
CCDC12-209ENST00000604164 URM1Q9BTM9 101 aaKnown RBP9.3□□□□□ -0.92
CCDC12-209ENST00000604164 LIN7BQ9HAP6 207 aa9.3□□□□□ -0.92
CCDC12-209ENST00000604164 LY6LH3BQJ8 138 aa9.29□□□□□ -0.92
CCDC12-209ENST00000604164 SLC17A2O00624 439 aa9.29□□□□□ -0.92
CCDC12-209ENST00000604164 CHST1O43916 411 aa9.29□□□□□ -0.92
CCDC12-209ENST00000604164 VSIG8P0DPA2 414 aa9.29□□□□□ -0.92
CCDC12-209ENST00000604164 ARSBP15848 533 aa9.29□□□□□ -0.92
CCDC12-209ENST00000604164 MYL9P24844 172 aa9.29□□□□□ -0.92
CCDC12-209ENST00000604164 CALRP27797 417 aaKnown RBP9.29□□□□□ -0.92
CCDC12-209ENST00000604164 EFNB2P52799 333 aa9.29□□□□□ -0.92
CCDC12-209ENST00000604164 GP2P55259 537 aaKnown RBP9.29□□□□□ -0.92
CCDC12-209ENST00000604164 RPS27AP62979 156 aaKnown RBP9.29□□□□□ -0.92
CCDC12-209ENST00000604164 HERPUD1Q15011 391 aa9.29□□□□□ -0.92
CCDC12-209ENST00000604164 RAB11BQ15907 218 aa9.29□□□□□ -0.92
CCDC12-209ENST00000604164 LTC4SQ16873 150 aa9.29□□□□□ -0.92
CCDC12-209ENST00000604164 SYT6Q5T7P8 510 aaPredicted RBP9.29□□□□□ -0.92
CCDC12-209ENST00000604164 BAIAP2L2Q6UXY1 529 aa9.29□□□□□ -0.92
CCDC12-209ENST00000604164 TMEM91Q6ZNR0 172 aa9.29□□□□□ -0.92
CCDC12-209ENST00000604164 TMEM219Q86XT9 240 aa9.29□□□□□ -0.92
CCDC12-209ENST00000604164 THNSL2Q86YJ6 484 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms