RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 CRYBA1P05813 215 aa13.08□□□□□ -0.32
LSM4-206ENST00000600289 GZMHP20718 246 aa13.08□□□□□ -0.32
LSM4-206ENST00000600289 FUT3P21217 361 aa13.08□□□□□ -0.32
LSM4-206ENST00000600289 PSMD7P51665 324 aa13.08□□□□□ -0.32
LSM4-206ENST00000600289 RPS27AP62979 156 aaKnown RBP13.08□□□□□ -0.32
LSM4-206ENST00000600289 RELBQ01201 579 aa13.08□□□□□ -0.32
LSM4-206ENST00000600289 UNC119Q13432 240 aa13.08□□□□□ -0.32
LSM4-206ENST00000600289 SIGIRRQ6IA17 410 aa13.08□□□□□ -0.32
LSM4-206ENST00000600289 OR2W3Q7Z3T1 314 aa13.08□□□□□ -0.32
LSM4-206ENST00000600289 ABHD12Q8N2K0 398 aa13.08□□□□□ -0.32
LSM4-206ENST00000600289 OR4F5Q8NH21 305 aa13.08□□□□□ -0.32
LSM4-206ENST00000600289 ZNF696Q9H7X3 374 aa13.08□□□□□ -0.32
LSM4-206ENST00000600289 ZNF286AQ9HBT8 521 aa13.08□□□□□ -0.32
LSM4-206ENST00000600289 ING3Q9NXR8 418 aa13.08□□□□□ -0.32
LSM4-206ENST00000600289 IDI2-AS1Q9NZ38 188 aa13.08□□□□□ -0.32
LSM4-206ENST00000600289 FBLN5Q9UBX5 448 aa13.08□□□□□ -0.32
LSM4-206ENST00000600289 ORC5O43913 435 aa13.07□□□□□ -0.32
LSM4-206ENST00000600289 PDCD6O75340 191 aa13.07□□□□□ -0.32
LSM4-206ENST00000600289 MT-ND4P03905 459 aa13.07□□□□□ -0.32
LSM4-206ENST00000600289 OMGP23515 440 aa13.07□□□□□ -0.32
LSM4-206ENST00000600289 HTR1DP28221 377 aa13.07□□□□□ -0.32
LSM4-206ENST00000600289 FGF9P31371 208 aaPredicted RBP13.07□□□□□ -0.32
LSM4-206ENST00000600289 RAG2P55895 527 aa13.07□□□□□ -0.32
LSM4-206ENST00000600289 DYNC1I2Q13409 638 aaKnown RBP13.07□□□□□ -0.32
LSM4-206ENST00000600289 BAIAP2L2Q6UXY1 529 aa13.07□□□□□ -0.32
LSM4-206ENST00000600289 DYNAPQ8N1N2 210 aa13.07□□□□□ -0.32
LSM4-206ENST00000600289 PIFOQ8TCI5 191 aa13.07□□□□□ -0.32
LSM4-206ENST00000600289 MRGPRDQ8TDS7 321 aa13.07□□□□□ -0.32
LSM4-206ENST00000600289 FAM46BQ96A09 425 aa13.07□□□□□ -0.32
LSM4-206ENST00000600289 CREB3L1Q96BA8 519 aa13.07□□□□□ -0.32
LSM4-206ENST00000600289 TMEM59Q9BXS4 323 aa13.07□□□□□ -0.32
LSM4-206ENST00000600289 AK6Q9Y3D8 172 aaKnown RBP13.07□□□□□ -0.32
LSM4-206ENST00000600289 PEX16Q9Y5Y5 336 aa13.07□□□□□ -0.32
LSM4-206ENST00000600289 C15orf65H3BRN8 121 aa13.06□□□□□ -0.32
LSM4-206ENST00000600289 PDCD5O14737 125 aa13.06□□□□□ -0.32
LSM4-206ENST00000600289 MPIG6BO95866 241 aa13.06□□□□□ -0.32
LSM4-206ENST00000600289 CHATP28329 748 aa13.06□□□□□ -0.32
LSM4-206ENST00000600289 HLA-DRB5Q30154 266 aa13.06□□□□□ -0.32
LSM4-206ENST00000600289 TMEM30BQ3MIR4 351 aa13.06□□□□□ -0.32
LSM4-206ENST00000600289 SYT6Q5T7P8 510 aaPredicted RBP13.06□□□□□ -0.32
LSM4-206ENST00000600289 TRAT1Q6PIZ9 186 aa13.06□□□□□ -0.32
LSM4-206ENST00000600289 OR52M1Q8NGK5 317 aa13.06□□□□□ -0.32
LSM4-206ENST00000600289 OR9G1Q8NH87 305 aa13.06□□□□□ -0.32
LSM4-206ENST00000600289 NEK7Q8TDX7 302 aa13.06□□□□□ -0.32
LSM4-206ENST00000600289 ZNF747Q9BV97 191 aa13.06□□□□□ -0.32
LSM4-206ENST00000600289 PLGRKTQ9HBL7 147 aa13.06□□□□□ -0.32
LSM4-206ENST00000600289 RAB18Q9NP72 206 aa13.06□□□□□ -0.32
LSM4-206ENST00000600289 ETAA1Q9NY74 926 aa13.06□□□□□ -0.32
LSM4-206ENST00000600289 V9GY05 133 aa13.06□□□□□ -0.32
LSM4-206ENST00000600289 AIPO00170 330 aa13.05□□□□□ -0.32
LSM4-206ENST00000600289 TSPAN9O75954 239 aa13.05□□□□□ -0.32
LSM4-206ENST00000600289 ARSBP15848 533 aa13.05□□□□□ -0.32
LSM4-206ENST00000600289 MDKP21741 143 aaPredicted RBP13.05□□□□□ -0.32
LSM4-206ENST00000600289 PSMB9P28065 219 aa13.05□□□□□ -0.32
LSM4-206ENST00000600289 SSTR5P35346 364 aa13.05□□□□□ -0.32
LSM4-206ENST00000600289 PRRX1P54821 245 aa13.05□□□□□ -0.32
LSM4-206ENST00000600289 RAB11BQ15907 218 aa13.05□□□□□ -0.32
LSM4-206ENST00000600289 SSX2Q16385 188 aa13.05□□□□□ -0.32
LSM4-206ENST00000600289 Q3ZCU0 254 aa13.05□□□□□ -0.32
LSM4-206ENST00000600289 DHRS7BQ6IAN0 325 aaPredicted RBP13.05□□□□□ -0.32
LSM4-206ENST00000600289 OR10K2Q6IF99 312 aa13.05□□□□□ -0.32
LSM4-206ENST00000600289 BRICD5Q6PL45 260 aa13.05□□□□□ -0.32
LSM4-206ENST00000600289 ZNF554Q86TJ5 538 aa13.05□□□□□ -0.32
LSM4-206ENST00000600289 FAM89BQ8N5H3 189 aa13.05□□□□□ -0.32
LSM4-206ENST00000600289 C16orf95Q9H693 158 aa13.05□□□□□ -0.32
LSM4-206ENST00000600289 BEX1Q9HBH7 125 aa13.05□□□□□ -0.32
LSM4-206ENST00000600289 RAB9BQ9NP90 201 aa13.05□□□□□ -0.32
LSM4-206ENST00000600289 MBNL3Q9NUK0 354 aaKnown RBP13.05□□□□□ -0.32
LSM4-206ENST00000600289 DPM3Q9P2X0 92 aa13.05□□□□□ -0.32
LSM4-206ENST00000600289 TCF19Q9Y242 345 aa13.05□□□□□ -0.32
LSM4-206ENST00000600289 SHISA3A0PJX4 238 aa13.04□□□□□ -0.32
LSM4-206ENST00000600289 LEUTXA8MZ59 168 aa13.04□□□□□ -0.32
LSM4-206ENST00000600289 OOSP1A8MZH6 123 aa13.04□□□□□ -0.32
LSM4-206ENST00000600289 LY6LH3BQJ8 138 aa13.04□□□□□ -0.32
LSM4-206ENST00000600289 BUB1B-PAK6H3BSN5 160 aa13.04□□□□□ -0.32
LSM4-206ENST00000600289 F2RL2O00254 374 aa13.04□□□□□ -0.32
LSM4-206ENST00000600289 TOR1AO14656 332 aa13.04□□□□□ -0.32
LSM4-206ENST00000600289 MYL9P24844 172 aa13.04□□□□□ -0.32
LSM4-206ENST00000600289 CEACAM3P40198 252 aa13.04□□□□□ -0.32
LSM4-206ENST00000600289 FAM189A2Q15884 450 aa13.04□□□□□ -0.32
LSM4-206ENST00000600289 C6orf183Q5T699 404 aa13.04□□□□□ -0.32
LSM4-206ENST00000600289 C8orf31Q8N9H6 132 aa13.04□□□□□ -0.32
LSM4-206ENST00000600289 NDNFQ8TB73 568 aa13.04□□□□□ -0.32
LSM4-206ENST00000600289 URM1Q9BTM9 101 aaKnown RBP13.04□□□□□ -0.32
LSM4-206ENST00000600289 LPAR5Q9H1C0 372 aa13.04□□□□□ -0.32
LSM4-206ENST00000600289 MMP28Q9H239 520 aa13.04□□□□□ -0.32
LSM4-206ENST00000600289 RANBP3Q9H6Z4 567 aaPredicted RBP13.04□□□□□ -0.32
LSM4-206ENST00000600289 PITPNC1Q9UKF7 332 aa13.04□□□□□ -0.32
LSM4-206ENST00000600289 STUB1Q9UNE7 303 aa13.04□□□□□ -0.32
LSM4-206ENST00000600289 AMMECR1Q9Y4X0 333 aaPredicted RBP13.04□□□□□ -0.32
LSM4-206ENST00000600289 TRAV39A0A0B4J263 110 aa13.03□□□□□ -0.32
LSM4-206ENST00000600289 CLPSL1A2RUU4 121 aa13.03□□□□□ -0.32
LSM4-206ENST00000600289 FAM172BPA6NC97 362 aa13.03□□□□□ -0.32
LSM4-206ENST00000600289 FOXI3A8MTJ6 420 aaPredicted RBP13.03□□□□□ -0.32
LSM4-206ENST00000600289 J3QR06 171 aa13.03□□□□□ -0.32
LSM4-206ENST00000600289 LDLRAD4O15165 306 aa13.03□□□□□ -0.32
LSM4-206ENST00000600289 RRP9O43818 475 aaKnown RBP13.03□□□□□ -0.32
LSM4-206ENST00000600289 NFYBP25208 207 aa13.03□□□□□ -0.32
LSM4-206ENST00000600289 PAX6P26367 422 aa13.03□□□□□ -0.32
LSM4-206ENST00000600289 P2RY14Q15391 338 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms