RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 F2RL2O00254 374 aa14.24□□□□□ -0.13
USHBP1-209ENST00000598570 TSPAN9O75954 239 aa14.24□□□□□ -0.13
USHBP1-209ENST00000598570 PAHP00439 452 aa14.24□□□□□ -0.13
USHBP1-209ENST00000598570 ARG1P05089 322 aa14.24□□□□□ -0.13
USHBP1-209ENST00000598570 LGALS4P56470 323 aa14.24□□□□□ -0.13
USHBP1-209ENST00000598570 LOXL3P58215 753 aa14.24□□□□□ -0.13
USHBP1-209ENST00000598570 Q3ZCU0 254 aa14.24□□□□□ -0.13
USHBP1-209ENST00000598570 ATAD3CQ5T2N8 411 aa14.24□□□□□ -0.13
USHBP1-209ENST00000598570 OR10K2Q6IF99 312 aa14.24□□□□□ -0.13
USHBP1-209ENST00000598570 GDPGP1Q6ZNW5 385 aa14.24□□□□□ -0.13
USHBP1-209ENST00000598570 LIAT1Q6ZQX7 453 aa14.24□□□□□ -0.13
USHBP1-209ENST00000598570 NR2C2APQ86WQ0 139 aa14.24□□□□□ -0.13
USHBP1-209ENST00000598570 SSX3Q99909 188 aa14.24□□□□□ -0.13
USHBP1-209ENST00000598570 LPAR5Q9H1C0 372 aa14.24□□□□□ -0.13
USHBP1-209ENST00000598570 C16orf95Q9H693 158 aa14.24□□□□□ -0.13
USHBP1-209ENST00000598570 ZNF286AQ9HBT8 521 aa14.24□□□□□ -0.13
USHBP1-209ENST00000598570 IDI2-AS1Q9NZ38 188 aa14.24□□□□□ -0.13
USHBP1-209ENST00000598570 HSF4Q9ULV5 492 aa14.24□□□□□ -0.13
USHBP1-209ENST00000598570 A0A0A6YYD4 124 aa14.23□□□□□ -0.13
USHBP1-209ENST00000598570 IFITM5A6NNB3 132 aa14.23□□□□□ -0.13
USHBP1-209ENST00000598570 ARSBP15848 533 aa14.23□□□□□ -0.13
USHBP1-209ENST00000598570 HTR1DP28221 377 aa14.23□□□□□ -0.13
USHBP1-209ENST00000598570 ACTG1P63261 375 aa14.23□□□□□ -0.13
USHBP1-209ENST00000598570 C2orf76Q3KRA6 126 aa14.23□□□□□ -0.13
USHBP1-209ENST00000598570 TMEM30BQ3MIR4 351 aa14.23□□□□□ -0.13
USHBP1-209ENST00000598570 TPRA1Q86W33 373 aa14.23□□□□□ -0.13
USHBP1-209ENST00000598570 CREB3L1Q96BA8 519 aa14.23□□□□□ -0.13
USHBP1-209ENST00000598570 FAM3DQ96BQ1 224 aa14.23□□□□□ -0.13
USHBP1-209ENST00000598570 ZNF747Q9BV97 191 aa14.23□□□□□ -0.13
USHBP1-209ENST00000598570 TMEM59Q9BXS4 323 aa14.23□□□□□ -0.13
USHBP1-209ENST00000598570 ZNF696Q9H7X3 374 aa14.23□□□□□ -0.13
USHBP1-209ENST00000598570 TXNL4BQ9NX01 149 aaKnown RBP14.23□□□□□ -0.13
USHBP1-209ENST00000598570 DPM3Q9P2X0 92 aa14.23□□□□□ -0.13
USHBP1-209ENST00000598570 STUB1Q9UNE7 303 aa14.23□□□□□ -0.13
USHBP1-209ENST00000598570 PKD1L1Q8TDX9 2849 aa14.22□□□□□ -0.13
USHBP1-209ENST00000598570 TRBV6-6A0A0A6YYG2 114 aa14.22□□□□□ -0.13
USHBP1-209ENST00000598570 OOSP1A8MZH6 123 aa14.22□□□□□ -0.13
USHBP1-209ENST00000598570 BUB1B-PAK6H3BSN5 160 aa14.22□□□□□ -0.13
USHBP1-209ENST00000598570 PDCD5O14737 125 aa14.22□□□□□ -0.13
USHBP1-209ENST00000598570 MPIG6BO95866 241 aa14.22□□□□□ -0.13
USHBP1-209ENST00000598570 NAPSAO96009 420 aa14.22□□□□□ -0.13
USHBP1-209ENST00000598570 JUNBP17275 347 aaPredicted RBP14.22□□□□□ -0.13
USHBP1-209ENST00000598570 OMGP23515 440 aa14.22□□□□□ -0.13
USHBP1-209ENST00000598570 PRRX1P54821 245 aa14.22□□□□□ -0.13
USHBP1-209ENST00000598570 TMEM50BP56557 158 aa14.22□□□□□ -0.13
USHBP1-209ENST00000598570 RAB11BQ15907 218 aa14.22□□□□□ -0.13
USHBP1-209ENST00000598570 HLA-DRB5Q30154 266 aa14.22□□□□□ -0.13
USHBP1-209ENST00000598570 LY6G6FQ5SQ64 297 aa14.22□□□□□ -0.13
USHBP1-209ENST00000598570 ZNF880Q6PDB4 577 aa14.22□□□□□ -0.13
USHBP1-209ENST00000598570 LINC00311Q8N616 119 aa14.22□□□□□ -0.13
USHBP1-209ENST00000598570 OR9G1Q8NH87 305 aa14.22□□□□□ -0.13
USHBP1-209ENST00000598570 MRGPRDQ8TDS7 321 aa14.22□□□□□ -0.13
USHBP1-209ENST00000598570 FAM46BQ96A09 425 aa14.22□□□□□ -0.13
USHBP1-209ENST00000598570 PTX4Q96A99 478 aa14.22□□□□□ -0.13
USHBP1-209ENST00000598570 CYYR1Q96J86 154 aa14.22□□□□□ -0.13
USHBP1-209ENST00000598570 STEAP1Q9UHE8 339 aa14.22□□□□□ -0.13
USHBP1-209ENST00000598570 A6NDX4 124 aa14.21□□□□□ -0.13
USHBP1-209ENST00000598570 H3BUX3 64 aa14.21□□□□□ -0.13
USHBP1-209ENST00000598570 J3QR06 171 aa14.21□□□□□ -0.13
USHBP1-209ENST00000598570 TNFAIP8O95379 198 aa14.21□□□□□ -0.13
USHBP1-209ENST00000598570 PSMB9P28065 219 aa14.21□□□□□ -0.13
USHBP1-209ENST00000598570 SSTR5P35346 364 aa14.21□□□□□ -0.13
USHBP1-209ENST00000598570 GLP1RP43220 463 aa14.21□□□□□ -0.13
USHBP1-209ENST00000598570 C22orf42Q6IC83 251 aa14.21□□□□□ -0.13
USHBP1-209ENST00000598570 TRAT1Q6PIZ9 186 aa14.21□□□□□ -0.13
USHBP1-209ENST00000598570 C12orf54Q6X4T0 127 aa14.21□□□□□ -0.13
USHBP1-209ENST00000598570 OR51D1Q8NGF3 324 aa14.21□□□□□ -0.13
USHBP1-209ENST00000598570 MRPL30Q8TCC3 161 aaKnown RBP14.21□□□□□ -0.13
USHBP1-209ENST00000598570 SULT4A1Q9BR01 284 aa14.21□□□□□ -0.13
USHBP1-209ENST00000598570 ETAA1Q9NY74 926 aa14.21□□□□□ -0.13
USHBP1-209ENST00000598570 PSG11Q9UQ72 335 aa14.21□□□□□ -0.13
USHBP1-209ENST00000598570 FBN3Q75N90 2809 aa14.2□□□□□ -0.14
USHBP1-209ENST00000598570 A0A087WXM4 84 aa14.2□□□□□ -0.14
USHBP1-209ENST00000598570 TRAV39A0A0B4J263 110 aa14.2□□□□□ -0.14
USHBP1-209ENST00000598570 LEUTXA8MZ59 168 aa14.2□□□□□ -0.14
USHBP1-209ENST00000598570 C12orf77C9JDV5 145 aa14.2□□□□□ -0.14
USHBP1-209ENST00000598570 AIPO00170 330 aa14.2□□□□□ -0.14
USHBP1-209ENST00000598570 RAB3BP20337 219 aa14.2□□□□□ -0.14
USHBP1-209ENST00000598570 OR10A3P58181 314 aa14.2□□□□□ -0.14
USHBP1-209ENST00000598570 P2RY14Q15391 338 aa14.2□□□□□ -0.14
USHBP1-209ENST00000598570 SSX2Q16385 188 aa14.2□□□□□ -0.14
USHBP1-209ENST00000598570 STEAP3Q658P3 488 aa14.2□□□□□ -0.14
USHBP1-209ENST00000598570 CCBE1Q6UXH8 406 aaPredicted RBP14.2□□□□□ -0.14
USHBP1-209ENST00000598570 Q6ZPA2 131 aa14.2□□□□□ -0.14
USHBP1-209ENST00000598570 TSPAN14Q8NG11 270 aa14.2□□□□□ -0.14
USHBP1-209ENST00000598570 OR4F5Q8NH21 305 aa14.2□□□□□ -0.14
USHBP1-209ENST00000598570 NICN1Q9BSH3 213 aa14.2□□□□□ -0.14
USHBP1-209ENST00000598570 MMP28Q9H239 520 aa14.2□□□□□ -0.14
USHBP1-209ENST00000598570 KCNK15Q9H427 330 aa14.2□□□□□ -0.14
USHBP1-209ENST00000598570 PLGRKTQ9HBL7 147 aa14.2□□□□□ -0.14
USHBP1-209ENST00000598570 ING3Q9NXR8 418 aa14.2□□□□□ -0.14
USHBP1-209ENST00000598570 RAB22AQ9UL26 194 aa14.2□□□□□ -0.14
USHBP1-209ENST00000598570 BTBD17A6NE02 478 aa14.19□□□□□ -0.14
USHBP1-209ENST00000598570 FAM90A9PA6NNJ1 464 aa14.19□□□□□ -0.14
USHBP1-209ENST00000598570 RCC1P18754 421 aaPredicted RBP14.19□□□□□ -0.14
USHBP1-209ENST00000598570 RAB6AP20340 208 aa14.19□□□□□ -0.14
USHBP1-209ENST00000598570 PAX6P26367 422 aa14.19□□□□□ -0.14
USHBP1-209ENST00000598570 RAG2P55895 527 aa14.19□□□□□ -0.14
USHBP1-209ENST00000598570 DYNC1I2Q13409 638 aaKnown RBP14.19□□□□□ -0.14
USHBP1-209ENST00000598570 HABP2Q14520 560 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms