RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 TRAV1-2A0A0B4J238 106 aa11.2□□□□□ -0.62
UPF1-205ENST00000598209 A0A1B0GX30 115 aa11.2□□□□□ -0.62
UPF1-205ENST00000598209 UBE2QL1A1L167 161 aa11.2□□□□□ -0.62
UPF1-205ENST00000598209 VGLL3A8MV65 326 aa11.2□□□□□ -0.62
UPF1-205ENST00000598209 NDUFA7O95182 113 aa11.2□□□□□ -0.62
UPF1-205ENST00000598209 GLAP06280 429 aa11.2□□□□□ -0.62
UPF1-205ENST00000598209 ARSBP15848 533 aa11.2□□□□□ -0.62
UPF1-205ENST00000598209 GZMHP20718 246 aa11.2□□□□□ -0.62
UPF1-205ENST00000598209 MDKP21741 143 aaPredicted RBP11.2□□□□□ -0.62
UPF1-205ENST00000598209 GALP22466 123 aa11.2□□□□□ -0.62
UPF1-205ENST00000598209 MYL9P24844 172 aa11.2□□□□□ -0.62
UPF1-205ENST00000598209 CFPP27918 469 aa11.2□□□□□ -0.62
UPF1-205ENST00000598209 HTR1DP28221 377 aa11.2□□□□□ -0.62
UPF1-205ENST00000598209 PSMD7P51665 324 aa11.2□□□□□ -0.62
UPF1-205ENST00000598209 RAG2P55895 527 aa11.2□□□□□ -0.62
UPF1-205ENST00000598209 RPS27AP62979 156 aaKnown RBP11.2□□□□□ -0.62
UPF1-205ENST00000598209 RAB11BQ15907 218 aa11.2□□□□□ -0.62
UPF1-205ENST00000598209 LY6EQ16553 131 aa11.2□□□□□ -0.62
UPF1-205ENST00000598209 LTC4SQ16873 150 aa11.2□□□□□ -0.62
UPF1-205ENST00000598209 UTF1Q5T230 341 aa11.2□□□□□ -0.62
UPF1-205ENST00000598209 DHRS7BQ6IAN0 325 aaPredicted RBP11.2□□□□□ -0.62
UPF1-205ENST00000598209 C22orf42Q6IC83 251 aa11.2□□□□□ -0.62
UPF1-205ENST00000598209 OR4F5Q8NH21 305 aa11.2□□□□□ -0.62
UPF1-205ENST00000598209 CYYR1Q96J86 154 aa11.2□□□□□ -0.62
UPF1-205ENST00000598209 TM2D1Q9BX74 207 aa11.2□□□□□ -0.62
UPF1-205ENST00000598209 HILPDAQ9Y5L2 63 aa11.2□□□□□ -0.62
UPF1-205ENST00000598209 SHISA3A0PJX4 238 aa11.19□□□□□ -0.62
UPF1-205ENST00000598209 C15orf65H3BRN8 121 aa11.19□□□□□ -0.62
UPF1-205ENST00000598209 TOR1AO14656 332 aa11.19□□□□□ -0.62
UPF1-205ENST00000598209 PDCD5O14737 125 aa11.19□□□□□ -0.62
UPF1-205ENST00000598209 CA11O75493 328 aa11.19□□□□□ -0.62
UPF1-205ENST00000598209 IGLV1-47P01700 117 aa11.19□□□□□ -0.62
UPF1-205ENST00000598209 CHATP28329 748 aa11.19□□□□□ -0.62
UPF1-205ENST00000598209 PRRX1P54821 245 aa11.19□□□□□ -0.62
UPF1-205ENST00000598209 CLDN12P56749 244 aa11.19□□□□□ -0.62
UPF1-205ENST00000598209 NEDD8Q15843 81 aa11.19□□□□□ -0.62
UPF1-205ENST00000598209 HLA-DRB5Q30154 266 aa11.19□□□□□ -0.62
UPF1-205ENST00000598209 NKAPLQ5M9Q1 402 aa11.19□□□□□ -0.62
UPF1-205ENST00000598209 OR2W3Q7Z3T1 314 aa11.19□□□□□ -0.62
UPF1-205ENST00000598209 OR10A7Q8NGE5 316 aa11.19□□□□□ -0.62
UPF1-205ENST00000598209 OR51D1Q8NGF3 324 aa11.19□□□□□ -0.62
UPF1-205ENST00000598209 OR4K15Q8NH41 348 aa11.19□□□□□ -0.62
UPF1-205ENST00000598209 OR9G1Q8NH87 305 aa11.19□□□□□ -0.62
UPF1-205ENST00000598209 PIFOQ8TCI5 191 aa11.19□□□□□ -0.62
UPF1-205ENST00000598209 ARL11Q969Q4 196 aa11.19□□□□□ -0.62
UPF1-205ENST00000598209 NEDD4LQ96PU5 975 aa11.19□□□□□ -0.62
UPF1-205ENST00000598209 NICN1Q9BSH3 213 aa11.19□□□□□ -0.62
UPF1-205ENST00000598209 ABCB10Q9NRK6 738 aa11.19□□□□□ -0.62
UPF1-205ENST00000598209 DPM3Q9P2X0 92 aa11.19□□□□□ -0.62
UPF1-205ENST00000598209 TRAPPC2LQ9UL33 140 aa11.19□□□□□ -0.62
UPF1-205ENST00000598209 STUB1Q9UNE7 303 aa11.19□□□□□ -0.62
UPF1-205ENST00000598209 ANK2Q01484 3957 aa11.18□□□□□ -0.62
UPF1-205ENST00000598209 A0A0A6YYD4 124 aa11.18□□□□□ -0.62
UPF1-205ENST00000598209 HAX1O00165 279 aa11.18□□□□□ -0.62
UPF1-205ENST00000598209 RRP9O43818 475 aaKnown RBP11.18□□□□□ -0.62
UPF1-205ENST00000598209 ORC5O43913 435 aa11.18□□□□□ -0.62
UPF1-205ENST00000598209 IGHV3-7P01780 117 aa11.18□□□□□ -0.62
UPF1-205ENST00000598209 JUNBP17275 347 aaPredicted RBP11.18□□□□□ -0.62
UPF1-205ENST00000598209 FGF9P31371 208 aaPredicted RBP11.18□□□□□ -0.62
UPF1-205ENST00000598209 RANBP1P43487 201 aa11.18□□□□□ -0.62
UPF1-205ENST00000598209 RAB13P51153 203 aa11.18□□□□□ -0.62
UPF1-205ENST00000598209 OR10A3P58181 314 aa11.18□□□□□ -0.62
UPF1-205ENST00000598209 C6orf183Q5T699 404 aa11.18□□□□□ -0.62
UPF1-205ENST00000598209 SYT6Q5T7P8 510 aaPredicted RBP11.18□□□□□ -0.62
UPF1-205ENST00000598209 HES5Q5TA89 166 aa11.18□□□□□ -0.62
UPF1-205ENST00000598209 GAPTQ8N292 157 aa11.18□□□□□ -0.62
UPF1-205ENST00000598209 UBALD1Q8TB05 177 aa11.18□□□□□ -0.62
UPF1-205ENST00000598209 LEAP2Q969E1 77 aa11.18□□□□□ -0.62
UPF1-205ENST00000598209 FAM3DQ96BQ1 224 aa11.18□□□□□ -0.62
UPF1-205ENST00000598209 SULT4A1Q9BR01 284 aa11.18□□□□□ -0.62
UPF1-205ENST00000598209 URM1Q9BTM9 101 aaKnown RBP11.18□□□□□ -0.62
UPF1-205ENST00000598209 LPAR5Q9H1C0 372 aa11.18□□□□□ -0.62
UPF1-205ENST00000598209 BEX1Q9HBH7 125 aa11.18□□□□□ -0.62
UPF1-205ENST00000598209 MMP24Q9Y5R2 645 aa11.18□□□□□ -0.62
UPF1-205ENST00000598209 A0A1B0GUS0 222 aa11.17□□□□□ -0.62
UPF1-205ENST00000598209 POM121CA8CG34 1229 aa11.17□□□□□ -0.62
UPF1-205ENST00000598209 LEUTXA8MZ59 168 aa11.17□□□□□ -0.62
UPF1-205ENST00000598209 BUB1B-PAK6H3BSN5 160 aa11.17□□□□□ -0.62
UPF1-205ENST00000598209 J3QR06 171 aa11.17□□□□□ -0.62
UPF1-205ENST00000598209 RAB3BP20337 219 aa11.17□□□□□ -0.62
UPF1-205ENST00000598209 BLVRBP30043 206 aaPredicted RBP11.17□□□□□ -0.62
UPF1-205ENST00000598209 CEACAM3P40198 252 aa11.17□□□□□ -0.62
UPF1-205ENST00000598209 GNG10P50151 68 aa11.17□□□□□ -0.62
UPF1-205ENST00000598209 DYNLT3P51808 116 aa11.17□□□□□ -0.62
UPF1-205ENST00000598209 C2orf76Q3KRA6 126 aa11.17□□□□□ -0.62
UPF1-205ENST00000598209 SLC16A12Q6ZSM3 486 aa11.17□□□□□ -0.62
UPF1-205ENST00000598209 Q6ZSV7 163 aa11.17□□□□□ -0.62
UPF1-205ENST00000598209 C6orf201Q7Z4U5 140 aa11.17□□□□□ -0.62
UPF1-205ENST00000598209 MRPL30Q8TCC3 161 aaKnown RBP11.17□□□□□ -0.62
UPF1-205ENST00000598209 CREB3L1Q96BA8 519 aa11.17□□□□□ -0.62
UPF1-205ENST00000598209 FAAP24Q9BTP7 215 aa11.17□□□□□ -0.62
UPF1-205ENST00000598209 ZNF747Q9BV97 191 aa11.17□□□□□ -0.62
UPF1-205ENST00000598209 MMP28Q9H239 520 aa11.17□□□□□ -0.62
UPF1-205ENST00000598209 TXNL4BQ9NX01 149 aaKnown RBP11.17□□□□□ -0.62
UPF1-205ENST00000598209 STEAP1Q9UHE8 339 aa11.17□□□□□ -0.62
UPF1-205ENST00000598209 SSR3Q9UNL2 185 aa11.17□□□□□ -0.62
UPF1-205ENST00000598209 PSG11Q9UQ72 335 aa11.17□□□□□ -0.62
UPF1-205ENST00000598209 TCF19Q9Y242 345 aa11.17□□□□□ -0.62
UPF1-205ENST00000598209 TENM1Q9UKZ4 2725 aa11.17□□□□□ -0.62
UPF1-205ENST00000598209 CLPSL1A2RUU4 121 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms