RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 GDPGP1Q6ZNW5 385 aa5.28□□□□□ -1.56
VPS4B-205ENST00000591383 USP43Q70EL4 1123 aa5.28□□□□□ -1.56
VPS4B-205ENST00000591383 OR2W3Q7Z3T1 314 aa5.28□□□□□ -1.56
VPS4B-205ENST00000591383 LINC00596Q86U02 117 aa5.28□□□□□ -1.56
VPS4B-205ENST00000591383 TPRA1Q86W33 373 aa5.28□□□□□ -1.56
VPS4B-205ENST00000591383 LYPD6Q86Y78 171 aa5.28□□□□□ -1.56
VPS4B-205ENST00000591383 CHST4Q8NCG5 386 aa5.28□□□□□ -1.56
VPS4B-205ENST00000591383 OR4S1Q8NGB4 309 aa5.28□□□□□ -1.56
VPS4B-205ENST00000591383 OR51D1Q8NGF3 324 aa5.28□□□□□ -1.56
VPS4B-205ENST00000591383 OR51T1Q8NGJ9 327 aa5.28□□□□□ -1.56
VPS4B-205ENST00000591383 KCNG3Q8TAE7 436 aa5.28□□□□□ -1.56
VPS4B-205ENST00000591383 DYRK2Q92630 601 aa5.28□□□□□ -1.56
VPS4B-205ENST00000591383 NICN1Q9BSH3 213 aa5.28□□□□□ -1.56
VPS4B-205ENST00000591383 PCGF1Q9BSM1 259 aa5.28□□□□□ -1.56
VPS4B-205ENST00000591383 URM1Q9BTM9 101 aaKnown RBP5.28□□□□□ -1.56
VPS4B-205ENST00000591383 DPCDQ9BVM2 203 aaPredicted RBP5.28□□□□□ -1.56
VPS4B-205ENST00000591383 DCSTAMPQ9H295 470 aa5.28□□□□□ -1.56
VPS4B-205ENST00000591383 MMP26Q9NRE1 261 aa5.28□□□□□ -1.56
VPS4B-205ENST00000591383 C19orf12Q9NSK7 152 aa5.28□□□□□ -1.56
VPS4B-205ENST00000591383 KAAG1Q9UBP8 84 aa5.28□□□□□ -1.56
VPS4B-205ENST00000591383 GHRLQ9UBU3 117 aa5.28□□□□□ -1.56
VPS4B-205ENST00000591383 RPUSD1Q9UJJ7 312 aaKnown RBP5.28□□□□□ -1.56
VPS4B-205ENST00000591383 SETD2Q9BYW2 2564 aaPredicted RBP5.28□□□□□ -1.56
VPS4B-205ENST00000591383 DSCAML1Q8TD84 2053 aa5.28□□□□□ -1.56
VPS4B-205ENST00000591383 NIPBLQ6KC79 2804 aaeCLIP5.28□□□□□ -1.56
VPS4B-205ENST00000591383 FN1P02751 2386 aaKnown RBP5.27□□□□□ -1.57
VPS4B-205ENST00000591383 A0A075B6Q4 140 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 IGHV3OR16-10A0A075B7F0 116 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 MEIKINA0A087WXM9 373 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 A0A0A6YYD4 124 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 TRAV24A0A0B4J272 114 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 TRAV40A0A0B4J280 105 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 PPIAL4CA0A0B4J2A2 164 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 TMEM30CPA0ZSE6 113 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 PGPEP1LA6NFU8 196 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 TMEM14DPA8MWL7 114 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 K7N7A8 449 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 MGST3O14880 152 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 PDCD6O75340 191 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 ECDO95905 644 aaPredicted RBP5.27□□□□□ -1.57
VPS4B-205ENST00000591383 PAHP00439 452 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 LIPFP07098 398 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 PPIAL4GP0DN37 164 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 CCL3L1P16619 93 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 RANBP1P43487 201 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 EFNB2P52799 333 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 P2RX3P56373 397 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 PRB3Q04118 309 aaPredicted RBP5.27□□□□□ -1.57
VPS4B-205ENST00000591383 AESQ08117 197 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 ZNF273Q14593 569 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 CTF1Q16619 201 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 KRBOX4Q5JUW0 171 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 METTL11BQ5VVY1 283 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 Q6P435 159 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 ASCL4Q6XD76 172 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 C17orf107Q6ZR85 190 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 RTN4RL2Q86UN3 420 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 ANKRD13BQ86YJ7 626 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 BPIFB2Q8N4F0 458 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 SUMF2Q8NBJ7 301 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 PLPPR1Q8TBJ4 325 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 RAB2BQ8WUD1 216 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 RAB40AQ8WXH6 277 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 SLC25A28Q96A46 364 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 MRPS24Q96EL2 167 aaKnown RBP5.27□□□□□ -1.57
VPS4B-205ENST00000591383 NEDD4LQ96PU5 975 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 DCTN5Q9BTE1 182 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 SHARPINQ9H0F6 387 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 FAM234AQ9H0X4 552 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 SPACA1Q9HBV2 294 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 CHMP1AQ9HD42 196 aaPredicted RBP5.27□□□□□ -1.57
VPS4B-205ENST00000591383 KIF25Q9UIL4 384 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 MXRA5Q9NR99 2828 aa5.27□□□□□ -1.57
VPS4B-205ENST00000591383 TRGV10A0A0A0MS01 117 aa5.26□□□□□ -1.57
VPS4B-205ENST00000591383 TRAV39A0A0B4J263 110 aa5.26□□□□□ -1.57
VPS4B-205ENST00000591383 hADV38S2A0JD32 116 aa5.26□□□□□ -1.57
VPS4B-205ENST00000591383 ODAMA1E959 279 aa5.26□□□□□ -1.57
VPS4B-205ENST00000591383 FUOMA2VDF0 154 aa5.26□□□□□ -1.57
VPS4B-205ENST00000591383 FAM172BPA6NC97 362 aa5.26□□□□□ -1.57
VPS4B-205ENST00000591383 MCRIP1C9JLW8 97 aa5.26□□□□□ -1.57
VPS4B-205ENST00000591383 J3QLI3 93 aa5.26□□□□□ -1.57
VPS4B-205ENST00000591383 TNFRSF13BO14836 293 aaPredicted RBP5.26□□□□□ -1.57
VPS4B-205ENST00000591383 CLPXO76031 633 aa5.26□□□□□ -1.57
VPS4B-205ENST00000591383 IL1AP01583 271 aa5.26□□□□□ -1.57
VPS4B-205ENST00000591383 GATA3P23771 443 aa5.26□□□□□ -1.57
VPS4B-205ENST00000591383 COX7A1P24310 79 aa5.26□□□□□ -1.57
VPS4B-205ENST00000591383 CFPP27918 469 aa5.26□□□□□ -1.57
VPS4B-205ENST00000591383 CHATP28329 748 aa5.26□□□□□ -1.57
VPS4B-205ENST00000591383 BLVRBP30043 206 aaPredicted RBP5.26□□□□□ -1.57
VPS4B-205ENST00000591383 GLIPR1P48060 266 aa5.26□□□□□ -1.57
VPS4B-205ENST00000591383 VEGFCP49767 419 aa5.26□□□□□ -1.57
VPS4B-205ENST00000591383 DLX1P56177 255 aa5.26□□□□□ -1.57
VPS4B-205ENST00000591383 ARF6P62330 175 aa5.26□□□□□ -1.57
VPS4B-205ENST00000591383 FOXL1Q12952 345 aa5.26□□□□□ -1.57
VPS4B-205ENST00000591383 KLRD1Q13241 179 aa5.26□□□□□ -1.57
VPS4B-205ENST00000591383 DYRK1AQ13627 763 aa5.26□□□□□ -1.57
VPS4B-205ENST00000591383 SPCS2Q15005 226 aa5.26□□□□□ -1.57
VPS4B-205ENST00000591383 LTC4SQ16873 150 aa5.26□□□□□ -1.57
VPS4B-205ENST00000591383 FAM120AOSQ5T036 256 aa5.26□□□□□ -1.57
VPS4B-205ENST00000591383 PRAMEF5Q5TYX0 476 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms