RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 J3QR06 171 aa16.4■□□□□ 0.22
SS18-224ENST00000584083 MT-ND4P03905 459 aa16.4■□□□□ 0.22
SS18-224ENST00000584083 CRHBPP24387 322 aa16.4■□□□□ 0.22
SS18-224ENST00000584083 MNDAP41218 407 aa16.4■□□□□ 0.22
SS18-224ENST00000584083 GNG10P50151 68 aa16.4■□□□□ 0.22
SS18-224ENST00000584083 GP2P55259 537 aaKnown RBP16.4■□□□□ 0.22
SS18-224ENST00000584083 HABP2Q14520 560 aaPredicted RBP16.4■□□□□ 0.22
SS18-224ENST00000584083 HSD17B12Q53GQ0 312 aa16.4■□□□□ 0.22
SS18-224ENST00000584083 CCDC144NLQ6NUI1 221 aa16.4■□□□□ 0.22
SS18-224ENST00000584083 ZNF497Q6ZNH5 498 aa16.4■□□□□ 0.22
SS18-224ENST00000584083 CAPSLQ8WWF8 208 aa16.4■□□□□ 0.22
SS18-224ENST00000584083 PHYHIPQ92561 330 aa16.4■□□□□ 0.22
SS18-224ENST00000584083 ARL11Q969Q4 196 aa16.4■□□□□ 0.22
SS18-224ENST00000584083 FAM46BQ96A09 425 aa16.4■□□□□ 0.22
SS18-224ENST00000584083 RPEQ96AT9 228 aa16.4■□□□□ 0.22
SS18-224ENST00000584083 PSG11Q9UQ72 335 aa16.4■□□□□ 0.22
SS18-224ENST00000584083 LY6LH3BQJ8 138 aa16.39■□□□□ 0.21
SS18-224ENST00000584083 AIPO00170 330 aa16.39■□□□□ 0.21
SS18-224ENST00000584083 SRMP19623 302 aa16.39■□□□□ 0.21
SS18-224ENST00000584083 VHLP40337 213 aa16.39■□□□□ 0.21
SS18-224ENST00000584083 HERPUD1Q15011 391 aa16.39■□□□□ 0.21
SS18-224ENST00000584083 GLT8D1Q68CQ7 371 aa16.39■□□□□ 0.21
SS18-224ENST00000584083 LRRTM1Q86UE6 522 aa16.39■□□□□ 0.21
SS18-224ENST00000584083 TOMM40LQ969M1 308 aa16.39■□□□□ 0.21
SS18-224ENST00000584083 CST11Q9H112 138 aa16.39■□□□□ 0.21
SS18-224ENST00000584083 ETAA1Q9NY74 926 aa16.39■□□□□ 0.21
SS18-224ENST00000584083 RCC2Q9P258 522 aaKnown RBP16.39■□□□□ 0.21
SS18-224ENST00000584083 GHRLQ9UBU3 117 aa16.39■□□□□ 0.21
SS18-224ENST00000584083 FAM90A10PA6NDY2 464 aa16.38■□□□□ 0.21
SS18-224ENST00000584083 FAM90A18PA6NE21 464 aa16.38■□□□□ 0.21
SS18-224ENST00000584083 FAM90A16PA6NEW6 464 aa16.38■□□□□ 0.21
SS18-224ENST00000584083 FAM90A20PA6NIJ5 464 aa16.38■□□□□ 0.21
SS18-224ENST00000584083 FAM90A7PA6NKC0 464 aa16.38■□□□□ 0.21
SS18-224ENST00000584083 FAM90A12PA8MX19 464 aa16.38■□□□□ 0.21
SS18-224ENST00000584083 FAM90A5PA8MXJ8 464 aa16.38■□□□□ 0.21
SS18-224ENST00000584083 FAM90A23PA8MXZ1 464 aa16.38■□□□□ 0.21
SS18-224ENST00000584083 OOSP1A8MZH6 123 aa16.38■□□□□ 0.21
SS18-224ENST00000584083 PEX14O75381 377 aa16.38■□□□□ 0.21
SS18-224ENST00000584083 ATP6V1G2O95670 118 aa16.38■□□□□ 0.21
SS18-224ENST00000584083 FAM90A15PP0C7V4 464 aa16.38■□□□□ 0.21
SS18-224ENST00000584083 FAM90A13PP0C7W8 464 aa16.38■□□□□ 0.21
SS18-224ENST00000584083 FAM90A14PP0C7W9 464 aa16.38■□□□□ 0.21
SS18-224ENST00000584083 FAM90A24PP0C7X0 464 aa16.38■□□□□ 0.21
SS18-224ENST00000584083 MAP2K4P45985 399 aa16.38■□□□□ 0.21
SS18-224ENST00000584083 BLCAPP62952 87 aa16.38■□□□□ 0.21
SS18-224ENST00000584083 TPBGQ13641 420 aa16.38■□□□□ 0.21
SS18-224ENST00000584083 SLC16A12Q6ZSM3 486 aa16.38■□□□□ 0.21
SS18-224ENST00000584083 PRSS48Q7RTY5 328 aa16.38■□□□□ 0.21
SS18-224ENST00000584083 C11orf44Q8N8P7 122 aa16.38■□□□□ 0.21
SS18-224ENST00000584083 UBALD1Q8TB05 177 aa16.38■□□□□ 0.21
SS18-224ENST00000584083 AKR1E2Q96JD6 320 aa16.38■□□□□ 0.21
SS18-224ENST00000584083 Q96M66 194 aa16.38■□□□□ 0.21
SS18-224ENST00000584083 ISYNA1Q9NPH2 558 aa16.38■□□□□ 0.21
SS18-224ENST00000584083 TRAPPC2LQ9UL33 140 aa16.38■□□□□ 0.21
SS18-224ENST00000584083 SDCBPO00560 298 aaPredicted RBP16.37■□□□□ 0.21
SS18-224ENST00000584083 ORC5O43913 435 aa16.37■□□□□ 0.21
SS18-224ENST00000584083 MPIG6BO95866 241 aa16.37■□□□□ 0.21
SS18-224ENST00000584083 UCHL1P09936 223 aa16.37■□□□□ 0.21
SS18-224ENST00000584083 UBBP0CG47 229 aa16.37■□□□□ 0.21
SS18-224ENST00000584083 FUT3P21217 361 aa16.37■□□□□ 0.21
SS18-224ENST00000584083 MLLT11Q13015 90 aaPredicted RBP16.37■□□□□ 0.21
SS18-224ENST00000584083 MADCAM1Q13477 382 aa16.37■□□□□ 0.21
SS18-224ENST00000584083 TRAM1Q15629 374 aa16.37■□□□□ 0.21
SS18-224ENST00000584083 C16orf82Q7Z2V1 217 aa16.37■□□□□ 0.21
SS18-224ENST00000584083 Q8N2B8 174 aa16.37■□□□□ 0.21
SS18-224ENST00000584083 OR10X1Q8NGY0 326 aa16.37■□□□□ 0.21
SS18-224ENST00000584083 OR4K15Q8NH41 348 aa16.37■□□□□ 0.21
SS18-224ENST00000584083 SERTAD4Q9NUC0 356 aa16.37■□□□□ 0.21
SS18-224ENST00000584083 BLOC1S6Q9UL45 172 aa16.37■□□□□ 0.21
SS18-224ENST00000584083 RAB26Q9ULW5 256 aa16.37■□□□□ 0.21
SS18-224ENST00000584083 TRRAPQ9Y4A5 3859 aa16.37■□□□□ 0.21
SS18-224ENST00000584083 A0A1W2PPE3 182 aa16.36■□□□□ 0.21
SS18-224ENST00000584083 UBE2QL1A1L167 161 aa16.36■□□□□ 0.21
SS18-224ENST00000584083 C15orf65H3BRN8 121 aa16.36■□□□□ 0.21
SS18-224ENST00000584083 SC5DO75845 299 aa16.36■□□□□ 0.21
SS18-224ENST00000584083 CPEP16870 476 aa16.36■□□□□ 0.21
SS18-224ENST00000584083 RPS25P62851 125 aaKnown RBP16.36■□□□□ 0.21
SS18-224ENST00000584083 C2orf68Q2NKX9 166 aa16.36■□□□□ 0.21
SS18-224ENST00000584083 C1orf100Q5SVJ3 147 aa16.36■□□□□ 0.21
SS18-224ENST00000584083 SYT6Q5T7P8 510 aaPredicted RBP16.36■□□□□ 0.21
SS18-224ENST00000584083 Q6ZS46 218 aa16.36■□□□□ 0.21
SS18-224ENST00000584083 MGLLQ99685 303 aa16.36■□□□□ 0.21
SS18-224ENST00000584083 SLC25A33Q9BSK2 321 aa16.36■□□□□ 0.21
SS18-224ENST00000584083 MMP27Q9H306 513 aa16.36■□□□□ 0.21
SS18-224ENST00000584083 LIN7BQ9HAP6 207 aa16.36■□□□□ 0.21
SS18-224ENST00000584083 TSPAN15O95858 294 aa16.35■□□□□ 0.21
SS18-224ENST00000584083 GLAP06280 429 aa16.35■□□□□ 0.21
SS18-224ENST00000584083 PSMA1P25786 263 aaKnown RBP16.35■□□□□ 0.21
SS18-224ENST00000584083 HTR2CP28335 458 aa16.35■□□□□ 0.21
SS18-224ENST00000584083 C6orf183Q5T699 404 aa16.35■□□□□ 0.21
SS18-224ENST00000584083 SIGIRRQ6IA17 410 aa16.35■□□□□ 0.21
SS18-224ENST00000584083 OR10K2Q6IF99 312 aa16.35■□□□□ 0.21
SS18-224ENST00000584083 TMEM91Q6ZNR0 172 aa16.35■□□□□ 0.21
SS18-224ENST00000584083 OR52M1Q8NGK5 317 aa16.35■□□□□ 0.21
SS18-224ENST00000584083 RAB9BQ9NP90 201 aa16.35■□□□□ 0.21
SS18-224ENST00000584083 IGHV3-43A0A0B4J1X8 118 aa16.34■□□□□ 0.21
SS18-224ENST00000584083 SPINT2O43291 252 aa16.34■□□□□ 0.21
SS18-224ENST00000584083 PDCD6O75340 191 aa16.34■□□□□ 0.21
SS18-224ENST00000584083 CA11O75493 328 aa16.34■□□□□ 0.21
SS18-224ENST00000584083 ARL6IP5O75915 188 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms