RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 SPNP16150 400 aa1.56□□□□□ -2.16
PPP4R1-227ENST00000583988 ZNF3P17036 446 aa1.56□□□□□ -2.16
PPP4R1-227ENST00000583988 ETV1P50549 477 aa1.56□□□□□ -2.16
PPP4R1-227ENST00000583988 AADACL4Q5VUY2 407 aa1.56□□□□□ -2.16
PPP4R1-227ENST00000583988 ELP2Q6IA86 826 aa1.56□□□□□ -2.16
PPP4R1-227ENST00000583988 GATD1Q8NB37 220 aa1.56□□□□□ -2.16
PPP4R1-227ENST00000583988 OR4A5Q8NH83 315 aa1.56□□□□□ -2.16
PPP4R1-227ENST00000583988 OR2V1Q8NHB1 315 aa1.56□□□□□ -2.16
PPP4R1-227ENST00000583988 CD200R1Q8TD46 325 aa1.56□□□□□ -2.16
PPP4R1-227ENST00000583988 RORBQ92753 470 aa1.56□□□□□ -2.16
PPP4R1-227ENST00000583988 CFAP53Q96M91 514 aa1.56□□□□□ -2.16
PPP4R1-227ENST00000583988 PRSS27Q9BQR3 290 aa1.56□□□□□ -2.16
PPP4R1-227ENST00000583988 FAAP24Q9BTP7 215 aa1.56□□□□□ -2.16
PPP4R1-227ENST00000583988 PRRG3Q9BZD7 231 aa1.56□□□□□ -2.16
PPP4R1-227ENST00000583988 CRCT1Q9UGL9 99 aa1.56□□□□□ -2.16
PPP4R1-227ENST00000583988 ZNF337Q9Y3M9 751 aa1.56□□□□□ -2.16
PPP4R1-227ENST00000583988 KMT2EQ8IZD2 1858 aa1.56□□□□□ -2.16
PPP4R1-227ENST00000583988 LCTP09848 1927 aa1.56□□□□□ -2.16
PPP4R1-227ENST00000583988 COL18A1P39060 1754 aa1.55□□□□□ -2.16
PPP4R1-227ENST00000583988 A0A1B0GX12 115 aa1.55□□□□□ -2.16
PPP4R1-227ENST00000583988 ARGFXA6NJG6 315 aa1.55□□□□□ -2.16
PPP4R1-227ENST00000583988 FAM25EA8MYX2 175 aa1.55□□□□□ -2.16
PPP4R1-227ENST00000583988 KLRC4-KLRK1H3BQV0 150 aa1.55□□□□□ -2.16
PPP4R1-227ENST00000583988 BOLA2-SMG1P6H3BVE0 249 aa1.55□□□□□ -2.16
PPP4R1-227ENST00000583988 PHYHO14832 338 aa1.55□□□□□ -2.16
PPP4R1-227ENST00000583988 OR12D1P0DN82 309 aa1.55□□□□□ -2.16
PPP4R1-227ENST00000583988 NQO2P16083 231 aa1.55□□□□□ -2.16
PPP4R1-227ENST00000583988 ATF1P18846 271 aa1.55□□□□□ -2.16
PPP4R1-227ENST00000583988 GZMHP20718 246 aa1.55□□□□□ -2.16
PPP4R1-227ENST00000583988 CRABP1P29762 137 aa1.55□□□□□ -2.16
PPP4R1-227ENST00000583988 FLOT2Q14254 428 aa1.55□□□□□ -2.16
PPP4R1-227ENST00000583988 USF2Q15853 346 aaPredicted RBP1.55□□□□□ -2.16
PPP4R1-227ENST00000583988 ACSBG2Q5FVE4 666 aa1.55□□□□□ -2.16
PPP4R1-227ENST00000583988 NOXRED1Q6NXP6 359 aa1.55□□□□□ -2.16
PPP4R1-227ENST00000583988 AHSA2Q719I0 299 aa1.55□□□□□ -2.16
PPP4R1-227ENST00000583988 TMEM25Q86YD3 366 aa1.55□□□□□ -2.16
PPP4R1-227ENST00000583988 OR11G2Q8NGC1 345 aa1.55□□□□□ -2.16
PPP4R1-227ENST00000583988 OR10P1Q8NGE3 313 aa1.55□□□□□ -2.16
PPP4R1-227ENST00000583988 LMX1AQ8TE12 382 aa1.55□□□□□ -2.16
PPP4R1-227ENST00000583988 OR5P2Q8WZ92 322 aa1.55□□□□□ -2.16
PPP4R1-227ENST00000583988 PPWD1Q96BP3 646 aaKnown RBP1.55□□□□□ -2.16
PPP4R1-227ENST00000583988 CATSPER2Q96P56 530 aa1.55□□□□□ -2.16
PPP4R1-227ENST00000583988 TAPBPLQ9BX59 468 aa1.55□□□□□ -2.16
PPP4R1-227ENST00000583988 UGT2B28Q9BY64 529 aa1.55□□□□□ -2.16
PPP4R1-227ENST00000583988 LRRC19Q9H756 370 aa1.55□□□□□ -2.16
PPP4R1-227ENST00000583988 KCNIP2Q9NS61 270 aa1.55□□□□□ -2.16
PPP4R1-227ENST00000583988 COMMD9Q9P000 198 aa1.55□□□□□ -2.16
PPP4R1-227ENST00000583988 MRM2Q9UI43 246 aaKnown RBP1.55□□□□□ -2.16
PPP4R1-227ENST00000583988 PSORS1C2Q9UIG4 136 aa1.55□□□□□ -2.16
PPP4R1-227ENST00000583988 BTRCQ9Y297 605 aa1.55□□□□□ -2.16
PPP4R1-227ENST00000583988 URGCP-MRPS24S4R325 110 aa1.55□□□□□ -2.16
PPP4R1-227ENST00000583988 ABCB11O95342 1321 aa1.55□□□□□ -2.16
PPP4R1-227ENST00000583988 DNMT1P26358 1616 aaKnown RBP1.55□□□□□ -2.16
PPP4R1-227ENST00000583988 DOCK6Q96HP0 2047 aa1.54□□□□□ -2.16
PPP4R1-227ENST00000583988 PCNX2A6NKB5 2137 aa1.54□□□□□ -2.16
PPP4R1-227ENST00000583988 AQP5P55064 265 aa1.54□□□□□ -2.16
PPP4R1-227ENST00000583988 MP68P56378 58 aa1.54□□□□□ -2.16
PPP4R1-227ENST00000583988 OR4D1Q15615 310 aa1.54□□□□□ -2.16
PPP4R1-227ENST00000583988 TMEM249Q2WGJ8 235 aa1.54□□□□□ -2.16
PPP4R1-227ENST00000583988 SCXQ7RTU7 201 aa1.54□□□□□ -2.16
PPP4R1-227ENST00000583988 MTERF4Q7Z6M4 381 aaKnown RBP1.54□□□□□ -2.16
PPP4R1-227ENST00000583988 MUC15Q8N387 334 aa1.54□□□□□ -2.16
PPP4R1-227ENST00000583988 GALMQ96C23 342 aa1.54□□□□□ -2.16
PPP4R1-227ENST00000583988 DDIT4LQ96D03 193 aa1.54□□□□□ -2.16
PPP4R1-227ENST00000583988 IFT46Q9NQC8 304 aa1.54□□□□□ -2.16
PPP4R1-227ENST00000583988 SNX24Q9Y343 169 aa1.54□□□□□ -2.16
PPP4R1-227ENST00000583988 MTCH2Q9Y6C9 303 aa1.54□□□□□ -2.16
PPP4R1-227ENST00000583988 CACNA1SQ13698 1873 aa1.54□□□□□ -2.16
PPP4R1-227ENST00000583988 A8MWP6 167 aa1.53□□□□□ -2.16
PPP4R1-227ENST00000583988 C8orf87E5RJ46 101 aa1.53□□□□□ -2.16
PPP4R1-227ENST00000583988 F5H5T6 163 aa1.53□□□□□ -2.16
PPP4R1-227ENST00000583988 LY6LH3BQJ8 138 aa1.53□□□□□ -2.16
PPP4R1-227ENST00000583988 H3BSA7 217 aa1.53□□□□□ -2.16
PPP4R1-227ENST00000583988 SGCEO43556 437 aa1.53□□□□□ -2.16
PPP4R1-227ENST00000583988 SLC25A20O43772 301 aa1.53□□□□□ -2.16
PPP4R1-227ENST00000583988 COL11A1P12107 1806 aaPredicted RBP1.53□□□□□ -2.16
PPP4R1-227ENST00000583988 S100A2P29034 98 aa1.53□□□□□ -2.16
PPP4R1-227ENST00000583988 ACTR1BP42025 376 aa1.53□□□□□ -2.16
PPP4R1-227ENST00000583988 AKR1C2P52895 323 aa1.53□□□□□ -2.16
PPP4R1-227ENST00000583988 PSG4Q00888 419 aa1.53□□□□□ -2.16
PPP4R1-227ENST00000583988 STX3Q13277 289 aa1.53□□□□□ -2.16
PPP4R1-227ENST00000583988 SKP2Q13309 424 aa1.53□□□□□ -2.16
PPP4R1-227ENST00000583988 APOFQ13790 326 aa1.53□□□□□ -2.16
PPP4R1-227ENST00000583988 OR8G1Q15617 311 aa1.53□□□□□ -2.16
PPP4R1-227ENST00000583988 ZNF567Q8N184 647 aa1.53□□□□□ -2.16
PPP4R1-227ENST00000583988 VWDEQ8N2E2 1590 aa1.53□□□□□ -2.16
PPP4R1-227ENST00000583988 SPERTQ8NA61 448 aa1.53□□□□□ -2.16
PPP4R1-227ENST00000583988 MRAP2Q96G30 205 aa1.53□□□□□ -2.16
PPP4R1-227ENST00000583988 PGLYRP3Q96LB9 341 aa1.53□□□□□ -2.16
PPP4R1-227ENST00000583988 SERPINB11Q96P15 392 aa1.53□□□□□ -2.16
PPP4R1-227ENST00000583988 TSSK6Q9BXA6 273 aa1.53□□□□□ -2.16
PPP4R1-227ENST00000583988 ZNF286AQ9HBT8 521 aa1.53□□□□□ -2.16
PPP4R1-227ENST00000583988 CHMP5Q9NZZ3 219 aa1.53□□□□□ -2.16
PPP4R1-227ENST00000583988 HSPE1-MOB4S4R3N1 261 aa1.53□□□□□ -2.16
PPP4R1-227ENST00000583988 SLIT2O94813 1529 aa1.52□□□□□ -2.17
PPP4R1-227ENST00000583988 PTPRKQ15262 1439 aa1.52□□□□□ -2.17
PPP4R1-227ENST00000583988 TRGV4A0A0C4DH28 118 aa1.52□□□□□ -2.17
PPP4R1-227ENST00000583988 CYTH3O43739 400 aa1.52□□□□□ -2.17
PPP4R1-227ENST00000583988 CRTAPO75718 401 aaPredicted RBP1.52□□□□□ -2.17
PPP4R1-227ENST00000583988 S1PR2O95136 353 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms