RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 DYNC2LI1Q8TCX1 351 aa1.81□□□□□ -2.12
SMCHD1-209ENST00000583441 KCTD4Q8WVF5 259 aa1.81□□□□□ -2.12
SMCHD1-209ENST00000583441 MAL2Q969L2 176 aa1.81□□□□□ -2.12
SMCHD1-209ENST00000583441 SLC25A44Q96H78 314 aaPredicted RBP1.81□□□□□ -2.12
SMCHD1-209ENST00000583441 B9D2Q9BPU9 175 aa1.81□□□□□ -2.12
SMCHD1-209ENST00000583441 OR51E2Q9H255 320 aa1.81□□□□□ -2.12
SMCHD1-209ENST00000583441 ASCL3Q9NQ33 180 aa1.81□□□□□ -2.12
SMCHD1-209ENST00000583441 BTRCQ9Y297 605 aa1.81□□□□□ -2.12
SMCHD1-209ENST00000583441 URGCP-MRPS24S4R325 110 aa1.81□□□□□ -2.12
SMCHD1-209ENST00000583441 LRPPRCP42704 1394 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-209ENST00000583441 TMEM131Q92545 1883 aa1.8□□□□□ -2.12
SMCHD1-209ENST00000583441 LOXHD1Q8IVV2 1947 aa1.8□□□□□ -2.12
SMCHD1-209ENST00000583441 A0A1B0GU33 70 aa1.8□□□□□ -2.12
SMCHD1-209ENST00000583441 A6NED7 52 aa1.8□□□□□ -2.12
SMCHD1-209ENST00000583441 F5H5K5 113 aa1.8□□□□□ -2.12
SMCHD1-209ENST00000583441 DENRO43583 198 aaKnown RBP1.8□□□□□ -2.12
SMCHD1-209ENST00000583441 SCN2BO60939 215 aa1.8□□□□□ -2.12
SMCHD1-209ENST00000583441 CDS2O95674 445 aa1.8□□□□□ -2.12
SMCHD1-209ENST00000583441 RAB36O95755 333 aa1.8□□□□□ -2.12
SMCHD1-209ENST00000583441 EPPINO95925 133 aa1.8□□□□□ -2.12
SMCHD1-209ENST00000583441 LGALS3P17931 250 aaKnown RBP1.8□□□□□ -2.12
SMCHD1-209ENST00000583441 S100A2P29034 98 aa1.8□□□□□ -2.12
SMCHD1-209ENST00000583441 STC1P52823 247 aa1.8□□□□□ -2.12
SMCHD1-209ENST00000583441 RAB2AP61019 212 aa1.8□□□□□ -2.12
SMCHD1-209ENST00000583441 FAM3AP98173 230 aa1.8□□□□□ -2.12
SMCHD1-209ENST00000583441 WDR59Q6PJI9 974 aa1.8□□□□□ -2.12
SMCHD1-209ENST00000583441 TMPPEQ6ZT21 453 aa1.8□□□□□ -2.12
SMCHD1-209ENST00000583441 SLC13A5Q86YT5 568 aaPredicted RBP1.8□□□□□ -2.12
SMCHD1-209ENST00000583441 OR5K1Q8NHB7 308 aa1.8□□□□□ -2.12
SMCHD1-209ENST00000583441 TRNT1Q96Q11 434 aaKnown RBP1.8□□□□□ -2.12
SMCHD1-209ENST00000583441 ARL6Q9H0F7 186 aa1.8□□□□□ -2.12
SMCHD1-209ENST00000583441 C1orf109Q9NX04 203 aa1.8□□□□□ -2.12
SMCHD1-209ENST00000583441 MS4A12Q9NXJ0 267 aa1.8□□□□□ -2.12
SMCHD1-209ENST00000583441 ZNF230Q9UIE0 474 aaPredicted RBP1.8□□□□□ -2.12
SMCHD1-209ENST00000583441 RPUSD1Q9UJJ7 312 aaKnown RBP1.8□□□□□ -2.12
SMCHD1-209ENST00000583441 U3KQK5 164 aa1.8□□□□□ -2.12
SMCHD1-209ENST00000583441 LINC00854A0A1B0GVQ3 168 aa1.79□□□□□ -2.12
SMCHD1-209ENST00000583441 C9J4A7 227 aa1.79□□□□□ -2.12
SMCHD1-209ENST00000583441 C8orf87E5RJ46 101 aa1.79□□□□□ -2.12
SMCHD1-209ENST00000583441 H3BSA7 217 aa1.79□□□□□ -2.12
SMCHD1-209ENST00000583441 GPR171O14626 319 aa1.79□□□□□ -2.12
SMCHD1-209ENST00000583441 LTAP01374 205 aa1.79□□□□□ -2.12
SMCHD1-209ENST00000583441 FBP1P09467 338 aa1.79□□□□□ -2.12
SMCHD1-209ENST00000583441 PVALBP20472 110 aaPredicted RBP1.79□□□□□ -2.12
SMCHD1-209ENST00000583441 CD151P48509 253 aa1.79□□□□□ -2.12
SMCHD1-209ENST00000583441 DLX6P56179 175 aa1.79□□□□□ -2.12
SMCHD1-209ENST00000583441 MEF2BQ02080 365 aaPredicted RBP1.79□□□□□ -2.12
SMCHD1-209ENST00000583441 SKP2Q13309 424 aa1.79□□□□□ -2.12
SMCHD1-209ENST00000583441 CLEC12BQ2HXU8 276 aa1.79□□□□□ -2.12
SMCHD1-209ENST00000583441 HENMT1Q5T8I9 393 aaKnown RBP1.79□□□□□ -2.12
SMCHD1-209ENST00000583441 TTC33Q6PID6 262 aaPredicted RBP1.79□□□□□ -2.12
SMCHD1-209ENST00000583441 ZBTB8OSQ8IWT0 167 aa1.79□□□□□ -2.12
SMCHD1-209ENST00000583441 SELENOHQ8IZQ5 122 aaKnown RBP1.79□□□□□ -2.12
SMCHD1-209ENST00000583441 Q8NAQ8 132 aa1.79□□□□□ -2.12
SMCHD1-209ENST00000583441 OR4A5Q8NH83 315 aa1.79□□□□□ -2.12
SMCHD1-209ENST00000583441 OR5P3Q8WZ94 311 aa1.79□□□□□ -2.12
SMCHD1-209ENST00000583441 GALMQ96C23 342 aa1.79□□□□□ -2.12
SMCHD1-209ENST00000583441 FAM210AQ96ND0 272 aa1.79□□□□□ -2.12
SMCHD1-209ENST00000583441 ZNF251Q9BRH9 671 aa1.79□□□□□ -2.12
SMCHD1-209ENST00000583441 NDEL1Q9GZM8 345 aa1.79□□□□□ -2.12
SMCHD1-209ENST00000583441 FBXL15Q9H469 300 aa1.79□□□□□ -2.12
SMCHD1-209ENST00000583441 SPACA1Q9HBV2 294 aa1.79□□□□□ -2.12
SMCHD1-209ENST00000583441 KCNIP2Q9NS61 270 aa1.79□□□□□ -2.12
SMCHD1-209ENST00000583441 TMEM216Q9P0N5 145 aa1.79□□□□□ -2.12
SMCHD1-209ENST00000583441 OR5V1Q9UGF6 321 aa1.79□□□□□ -2.12
SMCHD1-209ENST00000583441 FBXL3Q9UKT7 428 aa1.79□□□□□ -2.12
SMCHD1-209ENST00000583441 HIVEP2P31629 2446 aa1.79□□□□□ -2.12
SMCHD1-209ENST00000583441 RAB3GAP2Q9H2M9 1393 aa1.78□□□□□ -2.12
SMCHD1-209ENST00000583441 TRPC5OSA6NMA1 111 aa1.78□□□□□ -2.12
SMCHD1-209ENST00000583441 EEF1E1O43324 174 aaKnown RBP1.78□□□□□ -2.12
SMCHD1-209ENST00000583441 CTSEP14091 401 aa1.78□□□□□ -2.12
SMCHD1-209ENST00000583441 CTLA4P16410 223 aa1.78□□□□□ -2.12
SMCHD1-209ENST00000583441 EVI2BP34910 448 aa1.78□□□□□ -2.12
SMCHD1-209ENST00000583441 GZMMP51124 257 aa1.78□□□□□ -2.12
SMCHD1-209ENST00000583441 SLAMF1Q13291 335 aa1.78□□□□□ -2.12
SMCHD1-209ENST00000583441 PMS2P3Q13401 168 aa1.78□□□□□ -2.12
SMCHD1-209ENST00000583441 C10orf91Q5T1B1 145 aa1.78□□□□□ -2.12
SMCHD1-209ENST00000583441 SMARCD3Q6STE5 483 aa1.78□□□□□ -2.12
SMCHD1-209ENST00000583441 SPNS3Q6ZMD2 512 aa1.78□□□□□ -2.12
SMCHD1-209ENST00000583441 CYHR1Q6ZMK1 362 aa1.78□□□□□ -2.12
SMCHD1-209ENST00000583441 FAM19A3Q7Z5A8 133 aa1.78□□□□□ -2.12
SMCHD1-209ENST00000583441 LYPD6Q86Y78 171 aa1.78□□□□□ -2.12
SMCHD1-209ENST00000583441 HS3ST5Q8IZT8 346 aa1.78□□□□□ -2.12
SMCHD1-209ENST00000583441 OR9I1Q8NGQ6 314 aa1.78□□□□□ -2.12
SMCHD1-209ENST00000583441 OR11L1Q8NGX0 322 aa1.78□□□□□ -2.12
SMCHD1-209ENST00000583441 RNASEH2CQ8TDP1 164 aaKnown RBP1.78□□□□□ -2.12
SMCHD1-209ENST00000583441 HIST1H2BAQ96A08 127 aa1.78□□□□□ -2.12
SMCHD1-209ENST00000583441 RAD51AP1Q96B01 352 aa1.78□□□□□ -2.12
SMCHD1-209ENST00000583441 SMIM12Q96EX1 92 aa1.78□□□□□ -2.12
SMCHD1-209ENST00000583441 TMEM56Q96MV1 263 aa1.78□□□□□ -2.12
SMCHD1-209ENST00000583441 ALX4Q9H161 411 aaPredicted RBP1.78□□□□□ -2.12
SMCHD1-209ENST00000583441 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.78□□□□□ -2.12
SMCHD1-209ENST00000583441 THADAQ6YHU6 1953 aa1.78□□□□□ -2.13
SMCHD1-209ENST00000583441 TMEM94Q12767 1356 aa1.77□□□□□ -2.13
SMCHD1-209ENST00000583441 TOX3O15405 576 aaPredicted RBP1.77□□□□□ -2.13
SMCHD1-209ENST00000583441 MPZL2O60487 215 aa1.77□□□□□ -2.13
SMCHD1-209ENST00000583441 BRI3O95415 125 aa1.77□□□□□ -2.13
SMCHD1-209ENST00000583441 AKR1C2P52895 323 aa1.77□□□□□ -2.13
SMCHD1-209ENST00000583441 CST6Q15828 149 aa1.77□□□□□ -2.13
SMCHD1-209ENST00000583441 CENPWQ5EE01 88 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms