RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 CA11O75493 328 aa15.63■□□□□ 0.09
SS18-208ENST00000577751 CFPP27918 469 aa15.63■□□□□ 0.09
SS18-208ENST00000577751 SSTR5P35346 364 aa15.63■□□□□ 0.09
SS18-208ENST00000577751 RELBQ01201 579 aa15.63■□□□□ 0.09
SS18-208ENST00000577751 P2RY14Q15391 338 aa15.63■□□□□ 0.09
SS18-208ENST00000577751 LRRC75BQ2VPJ9 315 aa15.63■□□□□ 0.09
SS18-208ENST00000577751 C22orf42Q6IC83 251 aa15.63■□□□□ 0.09
SS18-208ENST00000577751 CYYR1Q96J86 154 aa15.63■□□□□ 0.09
SS18-208ENST00000577751 ETAA1Q9NY74 926 aa15.63■□□□□ 0.09
SS18-208ENST00000577751 IDI2-AS1Q9NZ38 188 aa15.63■□□□□ 0.09
SS18-208ENST00000577751 C1RLQ9NZP8 487 aa15.63■□□□□ 0.09
SS18-208ENST00000577751 FBLN5Q9UBX5 448 aa15.63■□□□□ 0.09
SS18-208ENST00000577751 STUB1Q9UNE7 303 aa15.63■□□□□ 0.09
SS18-208ENST00000577751 C15orf65H3BRN8 121 aa15.62■□□□□ 0.09
SS18-208ENST00000577751 AIPO00170 330 aa15.62■□□□□ 0.09
SS18-208ENST00000577751 PDCD5O14737 125 aa15.62■□□□□ 0.09
SS18-208ENST00000577751 ORC5O43913 435 aa15.62■□□□□ 0.09
SS18-208ENST00000577751 CRYBA1P05813 215 aa15.62■□□□□ 0.09
SS18-208ENST00000577751 MYL9P24844 172 aa15.62■□□□□ 0.09
SS18-208ENST00000577751 HTR1DP28221 377 aa15.62■□□□□ 0.09
SS18-208ENST00000577751 CHATP28329 748 aa15.62■□□□□ 0.09
SS18-208ENST00000577751 RANBP1P43487 201 aa15.62■□□□□ 0.09
SS18-208ENST00000577751 RAB11BQ15907 218 aa15.62■□□□□ 0.09
SS18-208ENST00000577751 SSX2Q16385 188 aa15.62■□□□□ 0.09
SS18-208ENST00000577751 GDPGP1Q6ZNW5 385 aa15.62■□□□□ 0.09
SS18-208ENST00000577751 FAM89BQ8N5H3 189 aa15.62■□□□□ 0.09
SS18-208ENST00000577751 OR51D1Q8NGF3 324 aa15.62■□□□□ 0.09
SS18-208ENST00000577751 ZNF596Q8TC21 504 aa15.62■□□□□ 0.09
SS18-208ENST00000577751 CCDC107Q8WV48 283 aa15.62■□□□□ 0.09
SS18-208ENST00000577751 LPAR5Q9H1C0 372 aa15.62■□□□□ 0.09
SS18-208ENST00000577751 TXNL4BQ9NX01 149 aaKnown RBP15.62■□□□□ 0.09
SS18-208ENST00000577751 A0A0A6YYD4 124 aa15.61■□□□□ 0.09
SS18-208ENST00000577751 FAM172BPA6NC97 362 aa15.61■□□□□ 0.09
SS18-208ENST00000577751 LDLRAD4O15165 306 aa15.61■□□□□ 0.09
SS18-208ENST00000577751 NDUFA7O95182 113 aa15.61■□□□□ 0.09
SS18-208ENST00000577751 TNFAIP8O95379 198 aa15.61■□□□□ 0.09
SS18-208ENST00000577751 RAB3BP20337 219 aa15.61■□□□□ 0.09
SS18-208ENST00000577751 NFYBP25208 207 aa15.61■□□□□ 0.09
SS18-208ENST00000577751 DYNLT3P51808 116 aa15.61■□□□□ 0.09
SS18-208ENST00000577751 CLDN12P56749 244 aa15.61■□□□□ 0.09
SS18-208ENST00000577751 OR10A3P58181 314 aa15.61■□□□□ 0.09
SS18-208ENST00000577751 HLA-DRB5Q30154 266 aa15.61■□□□□ 0.09
SS18-208ENST00000577751 C2orf76Q3KRA6 126 aa15.61■□□□□ 0.09
SS18-208ENST00000577751 SLC16A12Q6ZSM3 486 aa15.61■□□□□ 0.09
SS18-208ENST00000577751 RFESDQ8TAC1 157 aa15.61■□□□□ 0.09
SS18-208ENST00000577751 FAM3DQ96BQ1 224 aa15.61■□□□□ 0.09
SS18-208ENST00000577751 NICN1Q9BSH3 213 aa15.61■□□□□ 0.09
SS18-208ENST00000577751 DPM3Q9P2X0 92 aa15.61■□□□□ 0.09
SS18-208ENST00000577751 STEAP1Q9UHE8 339 aa15.61■□□□□ 0.09
SS18-208ENST00000577751 UBE2QL1A1L167 161 aa15.6■□□□□ 0.09
SS18-208ENST00000577751 IFITM5A6NNB3 132 aa15.6■□□□□ 0.09
SS18-208ENST00000577751 PRRX1P54821 245 aa15.6■□□□□ 0.09
SS18-208ENST00000577751 NEDD8Q15843 81 aa15.6■□□□□ 0.09
SS18-208ENST00000577751 NR2C2APQ86WQ0 139 aa15.6■□□□□ 0.09
SS18-208ENST00000577751 OR52M1Q8NGK5 317 aa15.6■□□□□ 0.09
SS18-208ENST00000577751 OR4K15Q8NH41 348 aa15.6■□□□□ 0.09
SS18-208ENST00000577751 OR9G1Q8NH87 305 aa15.6■□□□□ 0.09
SS18-208ENST00000577751 ARL11Q969Q4 196 aa15.6■□□□□ 0.09
SS18-208ENST00000577751 NEDD4LQ96PU5 975 aa15.6■□□□□ 0.09
SS18-208ENST00000577751 SULT4A1Q9BR01 284 aa15.6■□□□□ 0.09
SS18-208ENST00000577751 URM1Q9BTM9 101 aaKnown RBP15.6■□□□□ 0.09
SS18-208ENST00000577751 MBNL3Q9NUK0 354 aaKnown RBP15.6■□□□□ 0.09
SS18-208ENST00000577751 TRAPPC2LQ9UL33 140 aa15.6■□□□□ 0.09
SS18-208ENST00000577751 SSR3Q9UNL2 185 aa15.6■□□□□ 0.09
SS18-208ENST00000577751 HILPDAQ9Y5L2 63 aa15.6■□□□□ 0.09
SS18-208ENST00000577751 MMP24Q9Y5R2 645 aa15.6■□□□□ 0.09
SS18-208ENST00000577751 FOXI3A8MTJ6 420 aaPredicted RBP15.59■□□□□ 0.09
SS18-208ENST00000577751 LY6LH3BQJ8 138 aa15.59■□□□□ 0.09
SS18-208ENST00000577751 BUB1B-PAK6H3BSN5 160 aa15.59■□□□□ 0.09
SS18-208ENST00000577751 TOR1AO14656 332 aa15.59■□□□□ 0.09
SS18-208ENST00000577751 FAM189A2Q15884 450 aa15.59■□□□□ 0.09
SS18-208ENST00000577751 HES5Q5TA89 166 aa15.59■□□□□ 0.09
SS18-208ENST00000577751 C6orf201Q7Z4U5 140 aa15.59■□□□□ 0.09
SS18-208ENST00000577751 TSPAN14Q8NG11 270 aa15.59■□□□□ 0.09
SS18-208ENST00000577751 NDNFQ8TB73 568 aa15.59■□□□□ 0.09
SS18-208ENST00000577751 CREB3L1Q96BA8 519 aa15.59■□□□□ 0.09
SS18-208ENST00000577751 FAAP24Q9BTP7 215 aa15.59■□□□□ 0.09
SS18-208ENST00000577751 OR51E2Q9H255 320 aa15.59■□□□□ 0.09
SS18-208ENST00000577751 ZNF696Q9H7X3 374 aa15.59■□□□□ 0.09
SS18-208ENST00000577751 TENM1Q9UKZ4 2725 aa15.59■□□□□ 0.09
SS18-208ENST00000577751 A0A087WXM4 84 aa15.58■□□□□ 0.08
SS18-208ENST00000577751 LEUTXA8MZ59 168 aa15.58■□□□□ 0.08
SS18-208ENST00000577751 J3QR06 171 aa15.58■□□□□ 0.08
SS18-208ENST00000577751 F2RL2O00254 374 aa15.58■□□□□ 0.08
SS18-208ENST00000577751 SOCS1O15524 211 aa15.58■□□□□ 0.08
SS18-208ENST00000577751 RCC1P18754 421 aaPredicted RBP15.58■□□□□ 0.08
SS18-208ENST00000577751 MDKP21741 143 aaPredicted RBP15.58■□□□□ 0.08
SS18-208ENST00000577751 BLVRBP30043 206 aaPredicted RBP15.58■□□□□ 0.08
SS18-208ENST00000577751 RAB13P51153 203 aa15.58■□□□□ 0.08
SS18-208ENST00000577751 RAG2P55895 527 aa15.58■□□□□ 0.08
SS18-208ENST00000577751 TMEM50BP56557 158 aa15.58■□□□□ 0.08
SS18-208ENST00000577751 LOXL3P58215 753 aa15.58■□□□□ 0.08
SS18-208ENST00000577751 LTC4SQ16873 150 aa15.58■□□□□ 0.08
SS18-208ENST00000577751 NKAPLQ5M9Q1 402 aa15.58■□□□□ 0.08
SS18-208ENST00000577751 TPRA1Q86W33 373 aa15.58■□□□□ 0.08
SS18-208ENST00000577751 C3orf56Q8N813 242 aa15.58■□□□□ 0.08
SS18-208ENST00000577751 OR4F5Q8NH21 305 aa15.58■□□□□ 0.08
SS18-208ENST00000577751 MRPL30Q8TCC3 161 aaKnown RBP15.58■□□□□ 0.08
SS18-208ENST00000577751 LEAP2Q969E1 77 aa15.58■□□□□ 0.08
SS18-208ENST00000577751 MMP28Q9H239 520 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms