RNA–Protein interactions for RNA: ENST00000572290.1

NUP88-204, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-204ENST00000572290 UTF1Q5T230 341 aa16.21■□□□□ 0.19
NUP88-204ENST00000572290 OR2T6Q8NHC8 308 aa16.21■□□□□ 0.19
NUP88-204ENST00000572290 MGLLQ99685 303 aa16.21■□□□□ 0.19
NUP88-204ENST00000572290 CST11Q9H112 138 aa16.21■□□□□ 0.19
NUP88-204ENST00000572290 SIGLEC9Q9Y336 463 aa16.21■□□□□ 0.19
NUP88-204ENST00000572290 H3BUI4 141 aa16.2■□□□□ 0.18
NUP88-204ENST00000572290 MT-ND4P03905 459 aa16.2■□□□□ 0.18
NUP88-204ENST00000572290 UBBP0CG47 229 aa16.2■□□□□ 0.18
NUP88-204ENST00000572290 CPEP16870 476 aa16.2■□□□□ 0.18
NUP88-204ENST00000572290 PSMA1P25786 263 aaKnown RBP16.2■□□□□ 0.18
NUP88-204ENST00000572290 ARHGDIBP52566 201 aa16.2■□□□□ 0.18
NUP88-204ENST00000572290 RPS25P62851 125 aaKnown RBP16.2■□□□□ 0.18
NUP88-204ENST00000572290 C1orf100Q5SVJ3 147 aa16.2■□□□□ 0.18
NUP88-204ENST00000572290 TPTE2P1Q5T6R2 138 aa16.2■□□□□ 0.18
NUP88-204ENST00000572290 RAB12Q6IQ22 244 aa16.2■□□□□ 0.18
NUP88-204ENST00000572290 ZNF497Q6ZNH5 498 aa16.2■□□□□ 0.18
NUP88-204ENST00000572290 CCDC107Q8WV48 283 aa16.2■□□□□ 0.18
NUP88-204ENST00000572290 FAM46BQ96A09 425 aa16.2■□□□□ 0.18
NUP88-204ENST00000572290 Q96M66 194 aa16.2■□□□□ 0.18
NUP88-204ENST00000572290 MMP28Q9H239 520 aa16.2■□□□□ 0.18
NUP88-204ENST00000572290 ETAA1Q9NY74 926 aa16.2■□□□□ 0.18
NUP88-204ENST00000572290 PEX16Q9Y5Y5 336 aa16.2■□□□□ 0.18
NUP88-204ENST00000572290 J3QR06 171 aa16.19■□□□□ 0.18
NUP88-204ENST00000572290 AIPO00170 330 aa16.19■□□□□ 0.18
NUP88-204ENST00000572290 IGHV3-7P01780 117 aa16.19■□□□□ 0.18
NUP88-204ENST00000572290 BRS3P32247 399 aa16.19■□□□□ 0.18
NUP88-204ENST00000572290 EFNB2P52799 333 aa16.19■□□□□ 0.18
NUP88-204ENST00000572290 TBCEQ15813 527 aaPredicted RBP16.19■□□□□ 0.18
NUP88-204ENST00000572290 C11orf88Q6PI97 169 aa16.19■□□□□ 0.18
NUP88-204ENST00000572290 TMEM91Q6ZNR0 172 aa16.19■□□□□ 0.18
NUP88-204ENST00000572290 SLC16A12Q6ZSM3 486 aa16.19■□□□□ 0.18
NUP88-204ENST00000572290 LEAP2Q969E1 77 aa16.19■□□□□ 0.18
NUP88-204ENST00000572290 ARL11Q969Q4 196 aa16.19■□□□□ 0.18
NUP88-204ENST00000572290 PSG11Q9UQ72 335 aa16.19■□□□□ 0.18
NUP88-204ENST00000572290 AMMECR1Q9Y4X0 333 aaPredicted RBP16.19■□□□□ 0.18
NUP88-204ENST00000572290 OOSP1A8MZH6 123 aa16.18■□□□□ 0.18
NUP88-204ENST00000572290 LY6LH3BQJ8 138 aa16.18■□□□□ 0.18
NUP88-204ENST00000572290 TIMM23O14925 209 aa16.18■□□□□ 0.18
NUP88-204ENST00000572290 ARL6IP5O75915 188 aa16.18■□□□□ 0.18
NUP88-204ENST00000572290 MPIG6BO95866 241 aa16.18■□□□□ 0.18
NUP88-204ENST00000572290 GLAP06280 429 aa16.18■□□□□ 0.18
NUP88-204ENST00000572290 FUT3P21217 361 aa16.18■□□□□ 0.18
NUP88-204ENST00000572290 CCDC144NLQ6NUI1 221 aa16.18■□□□□ 0.18
NUP88-204ENST00000572290 ZNF367Q7RTV3 350 aa16.18■□□□□ 0.18
NUP88-204ENST00000572290 ZNF702PQ9H963 129 aa16.18■□□□□ 0.18
NUP88-204ENST00000572290 C15orf65H3BRN8 121 aa16.17■□□□□ 0.18
NUP88-204ENST00000572290 ORC5O43913 435 aa16.17■□□□□ 0.18
NUP88-204ENST00000572290 VSIG8P0DPA2 414 aa16.17■□□□□ 0.18
NUP88-204ENST00000572290 CD37P11049 281 aa16.17■□□□□ 0.18
NUP88-204ENST00000572290 HTR2CP28335 458 aa16.17■□□□□ 0.18
NUP88-204ENST00000572290 MNDAP41218 407 aa16.17■□□□□ 0.18
NUP88-204ENST00000572290 GNG10P50151 68 aa16.17■□□□□ 0.18
NUP88-204ENST00000572290 SIGIRRQ6IA17 410 aa16.17■□□□□ 0.18
NUP88-204ENST00000572290 OR10K2Q6IF99 312 aa16.17■□□□□ 0.18
NUP88-204ENST00000572290 TREML4Q6UXN2 200 aa16.17■□□□□ 0.18
NUP88-204ENST00000572290 RPEQ96AT9 228 aa16.17■□□□□ 0.18
NUP88-204ENST00000572290 Q9H521 79 aa16.17■□□□□ 0.18
NUP88-204ENST00000572290 TRAPPC2LQ9UL33 140 aa16.17■□□□□ 0.18
NUP88-204ENST00000572290 M0QZ24 198 aa16.16■□□□□ 0.18
NUP88-204ENST00000572290 SLC22A1O15245 554 aa16.16■□□□□ 0.18
NUP88-204ENST00000572290 PDCD6O75340 191 aa16.16■□□□□ 0.18
NUP88-204ENST00000572290 CA11O75493 328 aa16.16■□□□□ 0.18
NUP88-204ENST00000572290 CD24P25063 80 aa16.16■□□□□ 0.18
NUP88-204ENST00000572290 C6orf183Q5T699 404 aa16.16■□□□□ 0.18
NUP88-204ENST00000572290 SYT6Q5T7P8 510 aaPredicted RBP16.16■□□□□ 0.18
NUP88-204ENST00000572290 GAPTQ8N292 157 aa16.16■□□□□ 0.18
NUP88-204ENST00000572290 OR52M1Q8NGK5 317 aa16.16■□□□□ 0.18
NUP88-204ENST00000572290 OR6M1Q8NGM8 313 aa16.16■□□□□ 0.18
NUP88-204ENST00000572290 OR4K15Q8NH41 348 aa16.16■□□□□ 0.18
NUP88-204ENST00000572290 KCNG3Q8TAE7 436 aa16.16■□□□□ 0.18
NUP88-204ENST00000572290 UBALD1Q8TB05 177 aa16.16■□□□□ 0.18
NUP88-204ENST00000572290 TOMM40LQ969M1 308 aa16.16■□□□□ 0.18
NUP88-204ENST00000572290 PRSS22Q9GZN4 317 aa16.16■□□□□ 0.18
NUP88-204ENST00000572290 ACOT13Q9NPJ3 140 aa16.16■□□□□ 0.18
NUP88-204ENST00000572290 UBE2QL1A1L167 161 aa16.15■□□□□ 0.18
NUP88-204ENST00000572290 SDCBPO00560 298 aaPredicted RBP16.15■□□□□ 0.18
NUP88-204ENST00000572290 GABARAPL2P60520 117 aa16.15■□□□□ 0.18
NUP88-204ENST00000572290 RPS27AP62979 156 aaKnown RBP16.15■□□□□ 0.18
NUP88-204ENST00000572290 FABP5Q01469 135 aa16.15■□□□□ 0.18
NUP88-204ENST00000572290 MADCAM1Q13477 382 aa16.15■□□□□ 0.18
NUP88-204ENST00000572290 C16orf82Q7Z2V1 217 aa16.15■□□□□ 0.18
NUP88-204ENST00000572290 Q8N2B8 174 aa16.15■□□□□ 0.18
NUP88-204ENST00000572290 KLHDC1Q8N7A1 406 aa16.15■□□□□ 0.18
NUP88-204ENST00000572290 OR10X1Q8NGY0 326 aa16.15■□□□□ 0.18
NUP88-204ENST00000572290 AKR1E2Q96JD6 320 aa16.15■□□□□ 0.18
NUP88-204ENST00000572290 TMEM59Q9BXS4 323 aa16.15■□□□□ 0.18
NUP88-204ENST00000572290 RAB9BQ9NP90 201 aa16.15■□□□□ 0.18
NUP88-204ENST00000572290 AK6Q9Y3D8 172 aaKnown RBP16.15■□□□□ 0.18
NUP88-204ENST00000572290 DSCAML1Q8TD84 2053 aa16.14■□□□□ 0.17
NUP88-204ENST00000572290 A0A1W2PPE3 182 aa16.14■□□□□ 0.17
NUP88-204ENST00000572290 C12orf77C9JDV5 145 aa16.14■□□□□ 0.17
NUP88-204ENST00000572290 SPINT2O43291 252 aa16.14■□□□□ 0.17
NUP88-204ENST00000572290 DENRO43583 198 aaKnown RBP16.14■□□□□ 0.17
NUP88-204ENST00000572290 MRPS14O60783 128 aaKnown RBP16.14■□□□□ 0.17
NUP88-204ENST00000572290 BPNT1O95861 308 aa16.14■□□□□ 0.17
NUP88-204ENST00000572290 CALRP27797 417 aaKnown RBP16.14■□□□□ 0.17
NUP88-204ENST00000572290 BLCAPP62952 87 aa16.14■□□□□ 0.17
NUP88-204ENST00000572290 HABP2Q14520 560 aaPredicted RBP16.14■□□□□ 0.17
NUP88-204ENST00000572290 HERPUD1Q15011 391 aa16.14■□□□□ 0.17
NUP88-204ENST00000572290 NKAPLQ5M9Q1 402 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms