RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 IMMP1LQ96LU5 166 aa14.68□□□□□ -0.06
VAC14-210ENST00000568548 TCEAL7Q9BRU2 100 aa14.68□□□□□ -0.06
VAC14-210ENST00000568548 BDP1A6H8Y1 2624 aa14.68□□□□□ -0.06
VAC14-210ENST00000568548 NCKAP5O14513 1909 aa14.68□□□□□ -0.06
VAC14-210ENST00000568548 IGKV1-6A0A0C4DH72 117 aa14.68□□□□□ -0.06
VAC14-210ENST00000568548 TK1P04183 234 aa14.68□□□□□ -0.06
VAC14-210ENST00000568548 GDF1P27539 372 aa14.68□□□□□ -0.06
VAC14-210ENST00000568548 DUSP3P51452 185 aaPredicted RBP14.68□□□□□ -0.06
VAC14-210ENST00000568548 OR5T1Q8NG75 326 aa14.68□□□□□ -0.06
VAC14-210ENST00000568548 NIPSNAP3BQ9BS92 247 aa14.68□□□□□ -0.06
VAC14-210ENST00000568548 SLC22A20A6NK97 555 aa14.67□□□□□ -0.06
VAC14-210ENST00000568548 NTN3O00634 580 aaPredicted RBP14.67□□□□□ -0.06
VAC14-210ENST00000568548 HSPA12AO43301 675 aa14.67□□□□□ -0.06
VAC14-210ENST00000568548 VAMP5O95183 116 aa14.67□□□□□ -0.06
VAC14-210ENST00000568548 SRP19P09132 144 aaKnown RBP14.67□□□□□ -0.06
VAC14-210ENST00000568548 ELLP55199 621 aaPredicted RBP14.67□□□□□ -0.06
VAC14-210ENST00000568548 ZNF266Q14584 549 aa14.67□□□□□ -0.06
VAC14-210ENST00000568548 RTL6Q6ICC9 239 aa14.67□□□□□ -0.06
VAC14-210ENST00000568548 FAM53AQ6NSI3 398 aaPredicted RBP14.67□□□□□ -0.06
VAC14-210ENST00000568548 TMEM105Q8N8V8 129 aa14.67□□□□□ -0.06
VAC14-210ENST00000568548 AGBL5Q8NDL9 886 aa14.67□□□□□ -0.06
VAC14-210ENST00000568548 DMXL2Q8TDJ6 3036 aa14.67□□□□□ -0.06
VAC14-210ENST00000568548 ZNF665Q9H7R5 613 aa14.67□□□□□ -0.06
VAC14-210ENST00000568548 GAR1Q9NY12 217 aaKnown RBP14.67□□□□□ -0.06
VAC14-210ENST00000568548 MED13Q9UHV7 2174 aa14.67□□□□□ -0.06
VAC14-210ENST00000568548 TMED3Q9Y3Q3 217 aa14.67□□□□□ -0.06
VAC14-210ENST00000568548 NR2C1P13056 603 aa14.67□□□□□ -0.06
VAC14-210ENST00000568548 FUT6P51993 359 aa14.67□□□□□ -0.06
VAC14-210ENST00000568548 ELOBQ15370 118 aa14.67□□□□□ -0.06
VAC14-210ENST00000568548 OR2T2Q6IF00 324 aa14.67□□□□□ -0.06
VAC14-210ENST00000568548 IL22RA1Q8N6P7 574 aa14.67□□□□□ -0.06
VAC14-210ENST00000568548 ZNF610Q8N9Z0 462 aa14.67□□□□□ -0.06
VAC14-210ENST00000568548 ZNF552Q9H707 407 aaPredicted RBP14.67□□□□□ -0.06
VAC14-210ENST00000568548 MTCH1Q9NZJ7 389 aa14.67□□□□□ -0.06
VAC14-210ENST00000568548 RBM7Q9Y580 266 aaKnown RBP14.67□□□□□ -0.06
VAC14-210ENST00000568548 ZNF732B4DXR9 585 aa14.66□□□□□ -0.06
VAC14-210ENST00000568548 CBR3O75828 277 aa14.66□□□□□ -0.06
VAC14-210ENST00000568548 SCAF4O95104 1147 aaKnown RBP14.66□□□□□ -0.06
VAC14-210ENST00000568548 SOD3P08294 240 aa14.66□□□□□ -0.06
VAC14-210ENST00000568548 RAC3P60763 192 aa14.66□□□□□ -0.06
VAC14-210ENST00000568548 ICAM4Q14773 271 aa14.66□□□□□ -0.06
VAC14-210ENST00000568548 GGNQ86UU5 652 aa14.66□□□□□ -0.06
VAC14-210ENST00000568548 ZNF100Q8IYN0 542 aa14.66□□□□□ -0.06
VAC14-210ENST00000568548 COMMD1Q8N668 190 aa14.66□□□□□ -0.06
VAC14-210ENST00000568548 SGCZQ96LD1 299 aa14.66□□□□□ -0.06
VAC14-210ENST00000568548 SSX3Q99909 188 aa14.66□□□□□ -0.06
VAC14-210ENST00000568548 PLEKHF2Q9H8W4 249 aa14.66□□□□□ -0.06
VAC14-210ENST00000568548 PPP1R3CQ9UQK1 317 aa14.66□□□□□ -0.06
VAC14-210ENST00000568548 MED12LQ86YW9 2145 aa14.66□□□□□ -0.06
VAC14-210ENST00000568548 ZNF716A6NP11 495 aa14.66□□□□□ -0.06
VAC14-210ENST00000568548 HIST1H2BKO60814 126 aa14.66□□□□□ -0.06
VAC14-210ENST00000568548 P04436 131 aa14.66□□□□□ -0.06
VAC14-210ENST00000568548 HIST1H2BJP06899 126 aa14.66□□□□□ -0.06
VAC14-210ENST00000568548 METTL15P1P0C7V9 234 aa14.66□□□□□ -0.06
VAC14-210ENST00000568548 HIST1H2BOP23527 126 aa14.66□□□□□ -0.06
VAC14-210ENST00000568548 HIST1H2BBP33778 126 aa14.66□□□□□ -0.06
VAC14-210ENST00000568548 HIST1H2BDP58876 126 aa14.66□□□□□ -0.06
VAC14-210ENST00000568548 HIST1H2BCP62807 126 aa14.66□□□□□ -0.06
VAC14-210ENST00000568548 NKX6-1P78426 367 aaPredicted RBP14.66□□□□□ -0.06
VAC14-210ENST00000568548 HIST2H2BEQ16778 126 aa14.66□□□□□ -0.06
VAC14-210ENST00000568548 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.66□□□□□ -0.06
VAC14-210ENST00000568548 TCEAL6Q6IPX3 200 aa14.66□□□□□ -0.06
VAC14-210ENST00000568548 Q6ZRM9 215 aa14.66□□□□□ -0.06
VAC14-210ENST00000568548 HIST1H2BHQ93079 126 aa14.66□□□□□ -0.06
VAC14-210ENST00000568548 HIST1H2BNQ99877 126 aa14.66□□□□□ -0.06
VAC14-210ENST00000568548 HIST1H2BMQ99879 126 aa14.66□□□□□ -0.06
VAC14-210ENST00000568548 GPR35Q9HC97 309 aa14.66□□□□□ -0.06
VAC14-210ENST00000568548 OR6C6A6NF89 314 aa14.65□□□□□ -0.06
VAC14-210ENST00000568548 PAX6P26367 422 aa14.65□□□□□ -0.06
VAC14-210ENST00000568548 ARF1P84077 181 aaKnown RBP14.65□□□□□ -0.06
VAC14-210ENST00000568548 Q0VFX4 171 aa14.65□□□□□ -0.06
VAC14-210ENST00000568548 PRDX4Q13162 271 aa14.65□□□□□ -0.06
VAC14-210ENST00000568548 WDR25Q64LD2 544 aaPredicted RBP14.65□□□□□ -0.06
VAC14-210ENST00000568548 UNQ6494/PRO21346Q6UXR6 183 aa14.65□□□□□ -0.06
VAC14-210ENST00000568548 SNX22Q96L94 193 aa14.65□□□□□ -0.06
VAC14-210ENST00000568548 ERRFI1Q9UJM3 462 aaPredicted RBP14.65□□□□□ -0.06
VAC14-210ENST00000568548 ZNF816-ZNF321PA0A0X1KG74 233 aa14.65□□□□□ -0.06
VAC14-210ENST00000568548 PSG2P11465 335 aa14.65□□□□□ -0.06
VAC14-210ENST00000568548 B3GALT5-AS1P59052 145 aa14.65□□□□□ -0.06
VAC14-210ENST00000568548 ZFP36L1Q07352 338 aaKnown RBP14.65□□□□□ -0.06
VAC14-210ENST00000568548 BEND4Q6ZU67 534 aa14.65□□□□□ -0.06
VAC14-210ENST00000568548 TUBA4BQ9H853 241 aa14.65□□□□□ -0.06
VAC14-210ENST00000568548 EP300Q09472 2414 aaPredicted RBP14.65□□□□□ -0.06
VAC14-210ENST00000568548 ATMQ13315 3056 aa14.65□□□□□ -0.06
VAC14-210ENST00000568548 DEFA4P12838 97 aa14.65□□□□□ -0.06
VAC14-210ENST00000568548 BMP5P22003 454 aa14.65□□□□□ -0.06
VAC14-210ENST00000568548 DEFA6Q01524 100 aa14.65□□□□□ -0.06
VAC14-210ENST00000568548 MEGF10Q96KG7 1140 aa14.65□□□□□ -0.06
VAC14-210ENST00000568548 ROS1P08922 2347 aa14.65□□□□□ -0.06
VAC14-210ENST00000568548 FAM166BA8MTA8 275 aa14.64□□□□□ -0.07
VAC14-210ENST00000568548 C9J4A7 227 aa14.64□□□□□ -0.07
VAC14-210ENST00000568548 RNF224P0DH78 156 aa14.64□□□□□ -0.07
VAC14-210ENST00000568548 HOXA5P20719 270 aa14.64□□□□□ -0.07
VAC14-210ENST00000568548 GAMTQ14353 236 aa14.64□□□□□ -0.07
VAC14-210ENST00000568548 CCDC54Q8NEL0 328 aa14.64□□□□□ -0.07
VAC14-210ENST00000568548 OR1A1Q9P1Q5 309 aa14.64□□□□□ -0.07
VAC14-210ENST00000568548 CA11O75493 328 aa14.64□□□□□ -0.07
VAC14-210ENST00000568548 CST2P09228 141 aa14.64□□□□□ -0.07
VAC14-210ENST00000568548 HIKESHIQ53FT3 197 aa14.64□□□□□ -0.07
VAC14-210ENST00000568548 SSX7Q7RTT5 188 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms