RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 ARSBP15848 533 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 CD36P16671 472 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 OR10A3P58181 314 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 MIDNQ504T8 468 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 ATAD3CQ5T2N8 411 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 SLC35E4Q6ICL7 350 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 RAB12Q6IQ22 244 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 ZNF782Q6ZMW2 699 aaPredicted RBP5.03□□□□□ -1.6
CNOT1-204ENST00000563130 OR2W3Q7Z3T1 314 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 LDLRAD3Q86YD5 345 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 PNKDQ8N490 385 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 ZNF565Q8N9K5 539 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 OR11H6Q8NGC7 330 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 OR13A1Q8NGR1 328 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 YIPF6Q96EC8 236 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 CYYR1Q96J86 154 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 TMEM59Q9BXS4 323 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 LPAR5Q9H1C0 372 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 KCNK15Q9H427 330 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 PLGRKTQ9HBL7 147 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 DNHD1Q96M86 4753 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 MEIKINA0A087WXM9 373 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 A0A0A6YYD4 124 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 KBTBD11-OT1A0A1B0GTJ5 212 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 FOXI3A8MTJ6 420 aaPredicted RBP5.03□□□□□ -1.6
CNOT1-204ENST00000563130 H3BUI4 141 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 AIPO00170 330 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 PDCD5O14737 125 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 PDCD6O75340 191 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 CA11O75493 328 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 MT-ND4P03905 459 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 SMIM18P0DKX4 95 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 RAB3BP20337 219 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 FUT3P21217 361 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 GADD45AP24522 165 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 MYL9P24844 172 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 CHATP28329 748 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 CD34P28906 385 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 SAA4P35542 130 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 GDNFP39905 211 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 CLDN12P56749 244 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 UBA52P62987 128 aaKnown RBP5.03□□□□□ -1.6
CNOT1-204ENST00000563130 RBM39Q14498 530 aaKnown RBP5.03□□□□□ -1.6
CNOT1-204ENST00000563130 P2RY14Q15391 338 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 SLC9A3R2Q15599 337 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 RAB11BQ15907 218 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 C2orf76Q3KRA6 126 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 LDLRAD2Q5SZI1 272 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 XP32Q5T750 250 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 ZNF626Q68DY1 528 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 RBMS3Q6XE24 437 aaKnown RBP5.03□□□□□ -1.6
CNOT1-204ENST00000563130 ZNF497Q6ZNH5 498 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 GDPGP1Q6ZNW5 385 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 TPRA1Q86W33 373 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 OR51D1Q8NGF3 324 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 DYRK2Q92630 601 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 FAM3DQ96BQ1 224 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 NICN1Q9BSH3 213 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 TMEM133Q9H2Q1 129 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 GAL3ST2Q9H3Q3 398 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 ZNRD1Q9P1U0 126 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 STEAP1Q9UHE8 339 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 SSR3Q9UNL2 185 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 PEX16Q9Y5Y5 336 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 SESN1Q9Y6P5 492 aa5.03□□□□□ -1.6
CNOT1-204ENST00000563130 TMEM30CPA0ZSE6 113 aa5.02□□□□□ -1.61
CNOT1-204ENST00000563130 DNAJC9-AS1A6NH13 148 aa5.02□□□□□ -1.61
CNOT1-204ENST00000563130 MCRIP1C9JLW8 97 aa5.02□□□□□ -1.61
CNOT1-204ENST00000563130 IL1AP01583 271 aa5.02□□□□□ -1.61
CNOT1-204ENST00000563130 MELTFP08582 738 aa5.02□□□□□ -1.61
CNOT1-204ENST00000563130 FBP1P09467 338 aa5.02□□□□□ -1.61
CNOT1-204ENST00000563130 CDK2P24941 298 aa5.02□□□□□ -1.61
CNOT1-204ENST00000563130 RANBP1P43487 201 aa5.02□□□□□ -1.61
CNOT1-204ENST00000563130 IER3P46695 156 aa5.02□□□□□ -1.61
CNOT1-204ENST00000563130 HES5Q5TA89 166 aa5.02□□□□□ -1.61
CNOT1-204ENST00000563130 OR52W1Q6IF63 320 aa5.02□□□□□ -1.61
CNOT1-204ENST00000563130 TRAPPC6BQ86SZ2 158 aa5.02□□□□□ -1.61
CNOT1-204ENST00000563130 TMEM86BQ8N661 226 aa5.02□□□□□ -1.61
CNOT1-204ENST00000563130 BEND2Q8NDZ0 799 aa5.02□□□□□ -1.61
CNOT1-204ENST00000563130 OR13D1Q8NGV5 346 aa5.02□□□□□ -1.61
CNOT1-204ENST00000563130 FAM216AQ8WUB2 273 aa5.02□□□□□ -1.61
CNOT1-204ENST00000563130 C17orf50Q8WW18 174 aa5.02□□□□□ -1.61
CNOT1-204ENST00000563130 TMEM158Q8WZ71 300 aa5.02□□□□□ -1.61
CNOT1-204ENST00000563130 MISP3Q96FF7 219 aa5.02□□□□□ -1.61
CNOT1-204ENST00000563130 KIRREL1Q96J84 757 aa5.02□□□□□ -1.61
CNOT1-204ENST00000563130 KCTD7Q96MP8 289 aa5.02□□□□□ -1.61
CNOT1-204ENST00000563130 CHCHD6Q9BRQ6 235 aa5.02□□□□□ -1.61
CNOT1-204ENST00000563130 MEGF9Q9H1U4 602 aa5.02□□□□□ -1.61
CNOT1-204ENST00000563130 RNF167Q9H6Y7 350 aa5.02□□□□□ -1.61
CNOT1-204ENST00000563130 ZMAT3Q9HA38 289 aaKnown RBP5.02□□□□□ -1.61
CNOT1-204ENST00000563130 VCX3AQ9NNX9 186 aa5.02□□□□□ -1.61
CNOT1-204ENST00000563130 MBNL3Q9NUK0 354 aaKnown RBP5.02□□□□□ -1.61
CNOT1-204ENST00000563130 ING3Q9NXR8 418 aa5.02□□□□□ -1.61
CNOT1-204ENST00000563130 KIAA2026Q5HYC2 2103 aa5.02□□□□□ -1.61
CNOT1-204ENST00000563130 COL6A5A8TX70 2615 aa5.02□□□□□ -1.61
CNOT1-204ENST00000563130 IGHV2-26A0A0B4J1V2 119 aa5.02□□□□□ -1.61
CNOT1-204ENST00000563130 TMEM272A0A1B0GTI8 110 aa5.02□□□□□ -1.61
CNOT1-204ENST00000563130 A0A1W2PRD5 423 aa5.02□□□□□ -1.61
CNOT1-204ENST00000563130 A0A1W2PRF3 423 aa5.02□□□□□ -1.61
CNOT1-204ENST00000563130 A0A1W2PRM7 423 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms