RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 CGB7P0DN87 165 aa9.35□□□□□ -0.91
CARMIL3-204ENST00000561354 ZNF44P15621 663 aa9.35□□□□□ -0.91
CARMIL3-204ENST00000561354 ZNF182P17025 639 aaPredicted RBP9.35□□□□□ -0.91
CARMIL3-204ENST00000561354 DGCR2P98153 550 aa9.35□□□□□ -0.91
CARMIL3-204ENST00000561354 RBM39Q14498 530 aaKnown RBP9.35□□□□□ -0.91
CARMIL3-204ENST00000561354 SPCS2Q15005 226 aa9.35□□□□□ -0.91
CARMIL3-204ENST00000561354 MED22Q15528 200 aa9.35□□□□□ -0.91
CARMIL3-204ENST00000561354 KRBOX4Q5JUW0 171 aa9.35□□□□□ -0.91
CARMIL3-204ENST00000561354 UTF1Q5T230 341 aa9.35□□□□□ -0.91
CARMIL3-204ENST00000561354 Q6P435 159 aa9.35□□□□□ -0.91
CARMIL3-204ENST00000561354 C8orf86Q6ZUL3 223 aa9.35□□□□□ -0.91
CARMIL3-204ENST00000561354 FAM220AQ7Z4H9 259 aa9.35□□□□□ -0.91
CARMIL3-204ENST00000561354 SAXO1Q8IYX7 474 aa9.35□□□□□ -0.91
CARMIL3-204ENST00000561354 C5orf56Q8N8D9 126 aa9.35□□□□□ -0.91
CARMIL3-204ENST00000561354 OR10H4Q8NGA5 316 aa9.35□□□□□ -0.91
CARMIL3-204ENST00000561354 OR52I1Q8NGK6 324 aa9.35□□□□□ -0.91
CARMIL3-204ENST00000561354 S100ZQ8WXG8 99 aa9.35□□□□□ -0.91
CARMIL3-204ENST00000561354 TOMM40LQ969M1 308 aa9.35□□□□□ -0.91
CARMIL3-204ENST00000561354 RPEQ96AT9 228 aa9.35□□□□□ -0.91
CARMIL3-204ENST00000561354 FGGYQ96C11 551 aa9.35□□□□□ -0.91
CARMIL3-204ENST00000561354 LGALS12Q96DT0 336 aa9.35□□□□□ -0.91
CARMIL3-204ENST00000561354 RNFT2Q96EX2 444 aa9.35□□□□□ -0.91
CARMIL3-204ENST00000561354 KIRREL1Q96J84 757 aa9.35□□□□□ -0.91
CARMIL3-204ENST00000561354 EXOGQ9Y2C4 368 aaKnown RBP9.35□□□□□ -0.91
CARMIL3-204ENST00000561354 LSM2Q9Y333 95 aaKnown RBP9.35□□□□□ -0.91
CARMIL3-204ENST00000561354 AMMECR1Q9Y4X0 333 aaPredicted RBP9.35□□□□□ -0.91
CARMIL3-204ENST00000561354 SERPINE3A8MV23 424 aa9.34□□□□□ -0.91
CARMIL3-204ENST00000561354 NUDT19A8MXV4 375 aa9.34□□□□□ -0.91
CARMIL3-204ENST00000561354 J3QR06 171 aa9.34□□□□□ -0.91
CARMIL3-204ENST00000561354 SLC33A1O00400 549 aaPredicted RBP9.34□□□□□ -0.91
CARMIL3-204ENST00000561354 APOL3O95236 402 aa9.34□□□□□ -0.91
CARMIL3-204ENST00000561354 SNRNP70P08621 437 aaKnown RBP9.34□□□□□ -0.91
CARMIL3-204ENST00000561354 OCM2P0CE71 109 aa9.34□□□□□ -0.91
CARMIL3-204ENST00000561354 OCMP0CE72 109 aaPredicted RBP9.34□□□□□ -0.91
CARMIL3-204ENST00000561354 ZNF20P17024 532 aa9.34□□□□□ -0.91
CARMIL3-204ENST00000561354 ATP6V1E1P36543 226 aa9.34□□□□□ -0.91
CARMIL3-204ENST00000561354 WNT4P56705 351 aa9.34□□□□□ -0.91
CARMIL3-204ENST00000561354 SLC35B1P78383 322 aa9.34□□□□□ -0.91
CARMIL3-204ENST00000561354 ZNF85Q03923 595 aa9.34□□□□□ -0.91
CARMIL3-204ENST00000561354 SCN1BQ07699 218 aa9.34□□□□□ -0.91
CARMIL3-204ENST00000561354 FDX2Q6P4F2 183 aa9.34□□□□□ -0.91
CARMIL3-204ENST00000561354 C18orf65Q6ZTR6 163 aa9.34□□□□□ -0.91
CARMIL3-204ENST00000561354 ZNF695Q8IW36 515 aa9.34□□□□□ -0.91
CARMIL3-204ENST00000561354 ZNF565Q8N9K5 539 aa9.34□□□□□ -0.91
CARMIL3-204ENST00000561354 OR2G2Q8NGZ5 317 aa9.34□□□□□ -0.91
CARMIL3-204ENST00000561354 OR56B4Q8NH76 319 aa9.34□□□□□ -0.91
CARMIL3-204ENST00000561354 BORCS5Q969J3 196 aa9.34□□□□□ -0.91
CARMIL3-204ENST00000561354 NOL4LQ96MY1 436 aaPredicted RBP9.34□□□□□ -0.91
CARMIL3-204ENST00000561354 WDR12Q9GZL7 423 aaKnown RBP9.34□□□□□ -0.91
CARMIL3-204ENST00000561354 NCOR1P1Q9H4R4 102 aa9.34□□□□□ -0.91
CARMIL3-204ENST00000561354 LINC00574Q9H8X3 128 aa9.34□□□□□ -0.91
CARMIL3-204ENST00000561354 CCDC59Q9P031 241 aaKnown RBP9.34□□□□□ -0.91
CARMIL3-204ENST00000561354 FRRS1LQ9P0K9 344 aa9.34□□□□□ -0.91
CARMIL3-204ENST00000561354 GNG8Q9UK08 70 aa9.34□□□□□ -0.91
CARMIL3-204ENST00000561354 U3KQK5 164 aa9.34□□□□□ -0.91
CARMIL3-204ENST00000561354 TENM3Q9P273 2699 aa9.34□□□□□ -0.91
CARMIL3-204ENST00000561354 A0A1W2PPI3 338 aa9.33□□□□□ -0.92
CARMIL3-204ENST00000561354 DEGS1O15121 323 aa9.33□□□□□ -0.92
CARMIL3-204ENST00000561354 ZFPL1O95159 310 aa9.33□□□□□ -0.92
CARMIL3-204ENST00000561354 IGHG2P01859 326 aa9.33□□□□□ -0.92
CARMIL3-204ENST00000561354 TMEM11P17152 192 aa9.33□□□□□ -0.92
CARMIL3-204ENST00000561354 NFYBP25208 207 aa9.33□□□□□ -0.92
CARMIL3-204ENST00000561354 PSMA1P25786 263 aaKnown RBP9.33□□□□□ -0.92
CARMIL3-204ENST00000561354 RAB7AP51149 207 aa9.33□□□□□ -0.92
CARMIL3-204ENST00000561354 MADCAM1Q13477 382 aa9.33□□□□□ -0.92
CARMIL3-204ENST00000561354 CDK5R1Q15078 307 aa9.33□□□□□ -0.92
CARMIL3-204ENST00000561354 TP53I3Q53FA7 332 aa9.33□□□□□ -0.92
CARMIL3-204ENST00000561354 KCTD20Q7Z5Y7 419 aa9.33□□□□□ -0.92
CARMIL3-204ENST00000561354 FOXRED2Q8IWF2 684 aa9.33□□□□□ -0.92
CARMIL3-204ENST00000561354 OR8H3Q8N146 312 aa9.33□□□□□ -0.92
CARMIL3-204ENST00000561354 DRAM1Q8N682 238 aa9.33□□□□□ -0.92
CARMIL3-204ENST00000561354 KLHL30-AS1Q8NEE0 82 aa9.33□□□□□ -0.92
CARMIL3-204ENST00000561354 OR51T1Q8NGJ9 327 aa9.33□□□□□ -0.92
CARMIL3-204ENST00000561354 OR52N1Q8NH53 320 aa9.33□□□□□ -0.92
CARMIL3-204ENST00000561354 DYNC2LI1Q8TCX1 351 aa9.33□□□□□ -0.92
CARMIL3-204ENST00000561354 HAVCR2Q8TDQ0 301 aa9.33□□□□□ -0.92
CARMIL3-204ENST00000561354 RFT1Q96AA3 541 aa9.33□□□□□ -0.92
CARMIL3-204ENST00000561354 PPIL3Q9H2H8 161 aaKnown RBP9.33□□□□□ -0.92
CARMIL3-204ENST00000561354 NDUFB11Q9NX14 153 aa9.33□□□□□ -0.92
CARMIL3-204ENST00000561354 LSM4Q9Y4Z0 139 aaKnown RBP9.33□□□□□ -0.92
CARMIL3-204ENST00000561354 NPIPB11E5RHQ5 1161 aa9.32□□□□□ -0.92
CARMIL3-204ENST00000561354 HSMCR30P0CW71 290 aa9.32□□□□□ -0.92
CARMIL3-204ENST00000561354 CPEP16870 476 aa9.32□□□□□ -0.92
CARMIL3-204ENST00000561354 GADD45AP24522 165 aa9.32□□□□□ -0.92
CARMIL3-204ENST00000561354 CALRP27797 417 aaKnown RBP9.32□□□□□ -0.92
CARMIL3-204ENST00000561354 SOX6P35712 828 aa9.32□□□□□ -0.92
CARMIL3-204ENST00000561354 CCR9P51686 369 aa9.32□□□□□ -0.92
CARMIL3-204ENST00000561354 VBP1P61758 197 aa9.32□□□□□ -0.92
CARMIL3-204ENST00000561354 EBI3Q14213 229 aa9.32□□□□□ -0.92
CARMIL3-204ENST00000561354 HES1Q14469 280 aa9.32□□□□□ -0.92
CARMIL3-204ENST00000561354 ATXN7L3Q14CW9 347 aaPredicted RBP9.32□□□□□ -0.92
CARMIL3-204ENST00000561354 TEX38Q6PEX7 206 aa9.32□□□□□ -0.92
CARMIL3-204ENST00000561354 TMPRSS11AQ6ZMR5 421 aa9.32□□□□□ -0.92
CARMIL3-204ENST00000561354 SLC35E3Q7Z769 313 aa9.32□□□□□ -0.92
CARMIL3-204ENST00000561354 STPG2Q8N412 459 aa9.32□□□□□ -0.92
CARMIL3-204ENST00000561354 OR5D18Q8NGL1 313 aa9.32□□□□□ -0.92
CARMIL3-204ENST00000561354 SPACA5Q96QH8 159 aa9.32□□□□□ -0.92
CARMIL3-204ENST00000561354 DCSTAMPQ9H295 470 aa9.32□□□□□ -0.92
CARMIL3-204ENST00000561354 NEK6Q9HC98 313 aa9.32□□□□□ -0.92
CARMIL3-204ENST00000561354 ING3Q9NXR8 418 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms