RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 A0A087X0M5 115 aa10.13□□□□□ -0.79
SLIRP-211ENST00000557623 A0A1B0GX30 115 aa10.13□□□□□ -0.79
SLIRP-211ENST00000557623 TOR1AO14656 332 aa10.13□□□□□ -0.79
SLIRP-211ENST00000557623 GPR137BO60478 399 aa10.13□□□□□ -0.79
SLIRP-211ENST00000557623 PDCD6O75340 191 aa10.13□□□□□ -0.79
SLIRP-211ENST00000557623 MMP23AO75900 390 aa10.13□□□□□ -0.79
SLIRP-211ENST00000557623 IL1AP01583 271 aa10.13□□□□□ -0.79
SLIRP-211ENST00000557623 ARSBP15848 533 aa10.13□□□□□ -0.79
SLIRP-211ENST00000557623 OMGP23515 440 aa10.13□□□□□ -0.79
SLIRP-211ENST00000557623 PRRX1P54821 245 aa10.13□□□□□ -0.79
SLIRP-211ENST00000557623 RPS27AP62979 156 aaKnown RBP10.13□□□□□ -0.79
SLIRP-211ENST00000557623 RAB11BQ15907 218 aa10.13□□□□□ -0.79
SLIRP-211ENST00000557623 AWAT1Q58HT5 328 aa10.13□□□□□ -0.79
SLIRP-211ENST00000557623 ZNF497Q6ZNH5 498 aa10.13□□□□□ -0.79
SLIRP-211ENST00000557623 OR2W3Q7Z3T1 314 aa10.13□□□□□ -0.79
SLIRP-211ENST00000557623 LHFPL4Q7Z7J7 247 aa10.13□□□□□ -0.79
SLIRP-211ENST00000557623 NDNFQ8TB73 568 aa10.13□□□□□ -0.79
SLIRP-211ENST00000557623 MRGPRDQ8TDS7 321 aa10.13□□□□□ -0.79
SLIRP-211ENST00000557623 C17orf50Q8WW18 174 aa10.13□□□□□ -0.79
SLIRP-211ENST00000557623 CREB3L1Q96BA8 519 aa10.13□□□□□ -0.79
SLIRP-211ENST00000557623 AJUBAQ96IF1 538 aa10.13□□□□□ -0.79
SLIRP-211ENST00000557623 URM1Q9BTM9 101 aaKnown RBP10.13□□□□□ -0.79
SLIRP-211ENST00000557623 TM2D1Q9BX74 207 aa10.13□□□□□ -0.79
SLIRP-211ENST00000557623 LINC00574Q9H8X3 128 aa10.13□□□□□ -0.79
SLIRP-211ENST00000557623 RAB9BQ9NP90 201 aa10.13□□□□□ -0.79
SLIRP-211ENST00000557623 ETAA1Q9NY74 926 aa10.13□□□□□ -0.79
SLIRP-211ENST00000557623 IDI2-AS1Q9NZ38 188 aa10.13□□□□□ -0.79
SLIRP-211ENST00000557623 STUB1Q9UNE7 303 aa10.13□□□□□ -0.79
SLIRP-211ENST00000557623 A0A1B0GUS0 222 aa10.12□□□□□ -0.79
SLIRP-211ENST00000557623 TMEM14DPA8MWL7 114 aa10.12□□□□□ -0.79
SLIRP-211ENST00000557623 NPIPB11E5RHQ5 1161 aa10.12□□□□□ -0.79
SLIRP-211ENST00000557623 H3BUX3 64 aa10.12□□□□□ -0.79
SLIRP-211ENST00000557623 AIPO00170 330 aa10.12□□□□□ -0.79
SLIRP-211ENST00000557623 TNFAIP8O95379 198 aa10.12□□□□□ -0.79
SLIRP-211ENST00000557623 MT-ND4P03905 459 aa10.12□□□□□ -0.79
SLIRP-211ENST00000557623 NFYBP25208 207 aa10.12□□□□□ -0.79
SLIRP-211ENST00000557623 HTR1DP28221 377 aa10.12□□□□□ -0.79
SLIRP-211ENST00000557623 ARHGDIBP52566 201 aa10.12□□□□□ -0.79
SLIRP-211ENST00000557623 SSX2Q16385 188 aa10.12□□□□□ -0.79
SLIRP-211ENST00000557623 TRAT1Q6PIZ9 186 aa10.12□□□□□ -0.79
SLIRP-211ENST00000557623 SLC16A12Q6ZSM3 486 aa10.12□□□□□ -0.79
SLIRP-211ENST00000557623 C3orf56Q8N813 242 aa10.12□□□□□ -0.79
SLIRP-211ENST00000557623 OR4F5Q8NH21 305 aa10.12□□□□□ -0.79
SLIRP-211ENST00000557623 KIRREL1Q96J84 757 aa10.12□□□□□ -0.79
SLIRP-211ENST00000557623 NEDD4LQ96PU5 975 aa10.12□□□□□ -0.79
SLIRP-211ENST00000557623 GFI1Q99684 422 aa10.12□□□□□ -0.79
SLIRP-211ENST00000557623 RAB18Q9NP72 206 aa10.12□□□□□ -0.79
SLIRP-211ENST00000557623 ABCB10Q9NRK6 738 aa10.12□□□□□ -0.79
SLIRP-211ENST00000557623 TRAPPC2LQ9UL33 140 aa10.12□□□□□ -0.79
SLIRP-211ENST00000557623 SSR3Q9UNL2 185 aa10.12□□□□□ -0.79
SLIRP-211ENST00000557623 VGLL3A8MV65 326 aa10.11□□□□□ -0.79
SLIRP-211ENST00000557623 LEUTXA8MZ59 168 aa10.11□□□□□ -0.79
SLIRP-211ENST00000557623 ORC5O43913 435 aa10.11□□□□□ -0.79
SLIRP-211ENST00000557623 NDUFA7O95182 113 aa10.11□□□□□ -0.79
SLIRP-211ENST00000557623 RAB3BP20337 219 aa10.11□□□□□ -0.79
SLIRP-211ENST00000557623 FGF9P31371 208 aaPredicted RBP10.11□□□□□ -0.79
SLIRP-211ENST00000557623 GDNFP39905 211 aa10.11□□□□□ -0.79
SLIRP-211ENST00000557623 CEACAM3P40198 252 aa10.11□□□□□ -0.79
SLIRP-211ENST00000557623 QRFPP83859 136 aa10.11□□□□□ -0.79
SLIRP-211ENST00000557623 UNC119Q13432 240 aa10.11□□□□□ -0.79
SLIRP-211ENST00000557623 P2RY14Q15391 338 aa10.11□□□□□ -0.79
SLIRP-211ENST00000557623 FAM189A2Q15884 450 aa10.11□□□□□ -0.79
SLIRP-211ENST00000557623 C6orf183Q5T699 404 aa10.11□□□□□ -0.79
SLIRP-211ENST00000557623 SYT6Q5T7P8 510 aaPredicted RBP10.11□□□□□ -0.79
SLIRP-211ENST00000557623 SIGIRRQ6IA17 410 aa10.11□□□□□ -0.79
SLIRP-211ENST00000557623 DHRS7BQ6IAN0 325 aaPredicted RBP10.11□□□□□ -0.79
SLIRP-211ENST00000557623 C22orf42Q6IC83 251 aa10.11□□□□□ -0.79
SLIRP-211ENST00000557623 OR10K2Q6IF99 312 aa10.11□□□□□ -0.79
SLIRP-211ENST00000557623 BAIAP2L2Q6UXY1 529 aa10.11□□□□□ -0.79
SLIRP-211ENST00000557623 OR4P4Q8NGL7 312 aa10.11□□□□□ -0.79
SLIRP-211ENST00000557623 OR9G1Q8NH87 305 aa10.11□□□□□ -0.79
SLIRP-211ENST00000557623 CCDC107Q8WV48 283 aa10.11□□□□□ -0.79
SLIRP-211ENST00000557623 BEX1Q9HBH7 125 aa10.11□□□□□ -0.79
SLIRP-211ENST00000557623 ZNF286AQ9HBT8 521 aa10.11□□□□□ -0.79
SLIRP-211ENST00000557623 VCX3AQ9NNX9 186 aa10.11□□□□□ -0.79
SLIRP-211ENST00000557623 C1RLQ9NZP8 487 aa10.11□□□□□ -0.79
SLIRP-211ENST00000557623 DPM3Q9P2X0 92 aa10.11□□□□□ -0.79
SLIRP-211ENST00000557623 STEAP1Q9UHE8 339 aa10.11□□□□□ -0.79
SLIRP-211ENST00000557623 AMMECR1Q9Y4X0 333 aaPredicted RBP10.11□□□□□ -0.79
SLIRP-211ENST00000557623 MMP24Q9Y5R2 645 aa10.11□□□□□ -0.79
SLIRP-211ENST00000557623 A0A087WXM4 84 aa10.1□□□□□ -0.79
SLIRP-211ENST00000557623 TRAV39A0A0B4J263 110 aa10.1□□□□□ -0.79
SLIRP-211ENST00000557623 UBE2QL1A1L167 161 aa10.1□□□□□ -0.79
SLIRP-211ENST00000557623 FAM172BPA6NC97 362 aa10.1□□□□□ -0.79
SLIRP-211ENST00000557623 IGLV1-47P01700 117 aa10.1□□□□□ -0.79
SLIRP-211ENST00000557623 CHATP28329 748 aa10.1□□□□□ -0.79
SLIRP-211ENST00000557623 SSTR5P35346 364 aa10.1□□□□□ -0.79
SLIRP-211ENST00000557623 DYNLT3P51808 116 aa10.1□□□□□ -0.79
SLIRP-211ENST00000557623 RAG2P55895 527 aa10.1□□□□□ -0.79
SLIRP-211ENST00000557623 NEDD8Q15843 81 aa10.1□□□□□ -0.79
SLIRP-211ENST00000557623 HLA-DRB5Q30154 266 aa10.1□□□□□ -0.79
SLIRP-211ENST00000557623 TMEM30BQ3MIR4 351 aa10.1□□□□□ -0.79
SLIRP-211ENST00000557623 NKAPLQ5M9Q1 402 aa10.1□□□□□ -0.79
SLIRP-211ENST00000557623 GAPTQ8N292 157 aa10.1□□□□□ -0.79
SLIRP-211ENST00000557623 OR51D1Q8NGF3 324 aa10.1□□□□□ -0.79
SLIRP-211ENST00000557623 OR52M1Q8NGK5 317 aa10.1□□□□□ -0.79
SLIRP-211ENST00000557623 RFESDQ8TAC1 157 aa10.1□□□□□ -0.79
SLIRP-211ENST00000557623 ARL11Q969Q4 196 aa10.1□□□□□ -0.79
SLIRP-211ENST00000557623 FAM3DQ96BQ1 224 aa10.1□□□□□ -0.79
SLIRP-211ENST00000557623 TXNL4BQ9NX01 149 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms