RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 ZNF497Q6ZNH5 498 aa11.07□□□□□ -0.64
SHMT2-219ENST00000555563 SPARTQ8N0X7 666 aa11.07□□□□□ -0.64
SHMT2-219ENST00000555563 OR6M1Q8NGM8 313 aa11.07□□□□□ -0.64
SHMT2-219ENST00000555563 LINC01006Q8NI28 216 aa11.07□□□□□ -0.64
SHMT2-219ENST00000555563 RFESDQ8TAC1 157 aa11.07□□□□□ -0.64
SHMT2-219ENST00000555563 IDI2-AS1Q9NZ38 188 aa11.07□□□□□ -0.64
SHMT2-219ENST00000555563 TCF19Q9Y242 345 aa11.07□□□□□ -0.64
SHMT2-219ENST00000555563 PEX16Q9Y5Y5 336 aa11.07□□□□□ -0.64
SHMT2-219ENST00000555563 C15orf65H3BRN8 121 aa11.06□□□□□ -0.64
SHMT2-219ENST00000555563 F2RL2O00254 374 aa11.06□□□□□ -0.64
SHMT2-219ENST00000555563 PDCD6O75340 191 aa11.06□□□□□ -0.64
SHMT2-219ENST00000555563 IGHV3-7P01780 117 aa11.06□□□□□ -0.64
SHMT2-219ENST00000555563 MT-ND4P03905 459 aa11.06□□□□□ -0.64
SHMT2-219ENST00000555563 DYNLT3P51808 116 aa11.06□□□□□ -0.64
SHMT2-219ENST00000555563 UNC119Q13432 240 aa11.06□□□□□ -0.64
SHMT2-219ENST00000555563 RBM39Q14498 530 aaKnown RBP11.06□□□□□ -0.64
SHMT2-219ENST00000555563 UBE2UQ5VVX9 321 aa11.06□□□□□ -0.64
SHMT2-219ENST00000555563 LIAT1Q6ZQX7 453 aa11.06□□□□□ -0.64
SHMT2-219ENST00000555563 CCDC107Q8WV48 283 aa11.06□□□□□ -0.64
SHMT2-219ENST00000555563 LEAP2Q969E1 77 aa11.06□□□□□ -0.64
SHMT2-219ENST00000555563 TMEM59Q9BXS4 323 aa11.06□□□□□ -0.64
SHMT2-219ENST00000555563 PLGRKTQ9HBL7 147 aa11.06□□□□□ -0.64
SHMT2-219ENST00000555563 ABCB10Q9NRK6 738 aa11.06□□□□□ -0.64
SHMT2-219ENST00000555563 ETAA1Q9NY74 926 aa11.06□□□□□ -0.64
SHMT2-219ENST00000555563 DPM3Q9P2X0 92 aa11.06□□□□□ -0.64
SHMT2-219ENST00000555563 AK6Q9Y3D8 172 aaKnown RBP11.06□□□□□ -0.64
SHMT2-219ENST00000555563 TENM1Q9UKZ4 2725 aa11.05□□□□□ -0.64
SHMT2-219ENST00000555563 TMEM14DPA8MWL7 114 aa11.05□□□□□ -0.64
SHMT2-219ENST00000555563 SLC17A2O00624 439 aa11.05□□□□□ -0.64
SHMT2-219ENST00000555563 TOR1AO14656 332 aa11.05□□□□□ -0.64
SHMT2-219ENST00000555563 TSPAN9O75954 239 aa11.05□□□□□ -0.64
SHMT2-219ENST00000555563 BPNT1O95861 308 aa11.05□□□□□ -0.64
SHMT2-219ENST00000555563 FUT3P21217 361 aa11.05□□□□□ -0.64
SHMT2-219ENST00000555563 PSMB9P28065 219 aa11.05□□□□□ -0.64
SHMT2-219ENST00000555563 RPS27AP62979 156 aaKnown RBP11.05□□□□□ -0.64
SHMT2-219ENST00000555563 QRFPP83859 136 aa11.05□□□□□ -0.64
SHMT2-219ENST00000555563 P2RY14Q15391 338 aa11.05□□□□□ -0.64
SHMT2-219ENST00000555563 NKAPLQ5M9Q1 402 aa11.05□□□□□ -0.64
SHMT2-219ENST00000555563 CD200R1LQ6Q8B3 271 aa11.05□□□□□ -0.64
SHMT2-219ENST00000555563 CCBE1Q6UXH8 406 aaPredicted RBP11.05□□□□□ -0.64
SHMT2-219ENST00000555563 TMEM219Q86XT9 240 aa11.05□□□□□ -0.64
SHMT2-219ENST00000555563 GAPTQ8N292 157 aa11.05□□□□□ -0.64
SHMT2-219ENST00000555563 OR4K15Q8NH41 348 aa11.05□□□□□ -0.64
SHMT2-219ENST00000555563 OR9G1Q8NH87 305 aa11.05□□□□□ -0.64
SHMT2-219ENST00000555563 KCNG3Q8TAE7 436 aa11.05□□□□□ -0.64
SHMT2-219ENST00000555563 UBALD1Q8TB05 177 aa11.05□□□□□ -0.64
SHMT2-219ENST00000555563 FCGR1BQ92637 280 aa11.05□□□□□ -0.64
SHMT2-219ENST00000555563 YTHDF1Q9BYJ9 559 aaKnown RBP11.05□□□□□ -0.64
SHMT2-219ENST00000555563 C16orf95Q9H693 158 aa11.05□□□□□ -0.64
SHMT2-219ENST00000555563 RAB18Q9NP72 206 aa11.05□□□□□ -0.64
SHMT2-219ENST00000555563 RNF114Q9Y508 228 aa11.05□□□□□ -0.64
SHMT2-219ENST00000555563 SHISA3A0PJX4 238 aa11.04□□□□□ -0.64
SHMT2-219ENST00000555563 UBE2QL1A1L167 161 aa11.04□□□□□ -0.64
SHMT2-219ENST00000555563 A6NDX4 124 aa11.04□□□□□ -0.64
SHMT2-219ENST00000555563 LEUTXA8MZ59 168 aa11.04□□□□□ -0.64
SHMT2-219ENST00000555563 LY6LH3BQJ8 138 aa11.04□□□□□ -0.64
SHMT2-219ENST00000555563 BUB1B-PAK6H3BSN5 160 aa11.04□□□□□ -0.64
SHMT2-219ENST00000555563 CCRL2O00421 344 aa11.04□□□□□ -0.64
SHMT2-219ENST00000555563 WIPF1O43516 503 aa11.04□□□□□ -0.64
SHMT2-219ENST00000555563 GZMHP20718 246 aa11.04□□□□□ -0.64
SHMT2-219ENST00000555563 CHATP28329 748 aa11.04□□□□□ -0.64
SHMT2-219ENST00000555563 CEACAM3P40198 252 aa11.04□□□□□ -0.64
SHMT2-219ENST00000555563 GNG10P50151 68 aa11.04□□□□□ -0.64
SHMT2-219ENST00000555563 PRRX1P54821 245 aa11.04□□□□□ -0.64
SHMT2-219ENST00000555563 PROK1P58294 105 aa11.04□□□□□ -0.64
SHMT2-219ENST00000555563 SRSF4Q08170 494 aaKnown RBP11.04□□□□□ -0.64
SHMT2-219ENST00000555563 RAB11BQ15907 218 aa11.04□□□□□ -0.64
SHMT2-219ENST00000555563 TPTE2P1Q5T6R2 138 aa11.04□□□□□ -0.64
SHMT2-219ENST00000555563 ZNF773Q6PK81 442 aa11.04□□□□□ -0.64
SHMT2-219ENST00000555563 OR10A7Q8NGE5 316 aa11.04□□□□□ -0.64
SHMT2-219ENST00000555563 OR4C13Q8NGP0 309 aa11.04□□□□□ -0.64
SHMT2-219ENST00000555563 ARL11Q969Q4 196 aa11.04□□□□□ -0.64
SHMT2-219ENST00000555563 CREB3L1Q96BA8 519 aa11.04□□□□□ -0.64
SHMT2-219ENST00000555563 NICN1Q9BSH3 213 aa11.04□□□□□ -0.64
SHMT2-219ENST00000555563 TM2D1Q9BX74 207 aa11.04□□□□□ -0.64
SHMT2-219ENST00000555563 NPFFR1Q9GZQ6 430 aa11.04□□□□□ -0.64
SHMT2-219ENST00000555563 MMP28Q9H239 520 aa11.04□□□□□ -0.64
SHMT2-219ENST00000555563 TRAPPC2LQ9UL33 140 aa11.04□□□□□ -0.64
SHMT2-219ENST00000555563 PSG11Q9UQ72 335 aa11.04□□□□□ -0.64
SHMT2-219ENST00000555563 LRRC42Q9Y546 428 aa11.04□□□□□ -0.64
SHMT2-219ENST00000555563 TRDV1A0A1B0GX56 115 aa11.03□□□□□ -0.64
SHMT2-219ENST00000555563 C12orf77C9JDV5 145 aa11.03□□□□□ -0.64
SHMT2-219ENST00000555563 H3BUI4 141 aa11.03□□□□□ -0.64
SHMT2-219ENST00000555563 J3QR06 171 aa11.03□□□□□ -0.64
SHMT2-219ENST00000555563 SDCBPO00560 298 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-219ENST00000555563 ORC5O43913 435 aa11.03□□□□□ -0.64
SHMT2-219ENST00000555563 CA11O75493 328 aa11.03□□□□□ -0.64
SHMT2-219ENST00000555563 GLAP06280 429 aa11.03□□□□□ -0.64
SHMT2-219ENST00000555563 ARSBP15848 533 aa11.03□□□□□ -0.64
SHMT2-219ENST00000555563 CLDN12P56749 244 aa11.03□□□□□ -0.64
SHMT2-219ENST00000555563 OR10A3P58181 314 aa11.03□□□□□ -0.64
SHMT2-219ENST00000555563 KRTAP10-3P60369 221 aa11.03□□□□□ -0.64
SHMT2-219ENST00000555563 FBLN7Q53RD9 439 aa11.03□□□□□ -0.64
SHMT2-219ENST00000555563 C6orf183Q5T699 404 aa11.03□□□□□ -0.64
SHMT2-219ENST00000555563 SYT6Q5T7P8 510 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-219ENST00000555563 FAM53AQ6NSI3 398 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-219ENST00000555563 OR2W3Q7Z3T1 314 aa11.03□□□□□ -0.64
SHMT2-219ENST00000555563 TOMM40LQ969M1 308 aa11.03□□□□□ -0.64
SHMT2-219ENST00000555563 NEDD4LQ96PU5 975 aa11.03□□□□□ -0.64
SHMT2-219ENST00000555563 SULT4A1Q9BR01 284 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms