RNA–Protein interactions for RNA: ENST00000554573.5

RALGAPA1-208, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, human

TSL 5

Gene RALGAPA1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RALGAPA1-208	ENST00000554573	CASP1	P29466	404 aa		2.59	□□□□□ -2
RALGAPA1-208	ENST00000554573	CRABP1	P29762	137 aa		2.59	□□□□□ -2
RALGAPA1-208	ENST00000554573	HMGA2	P52926	109 aa		2.59	□□□□□ -2
RALGAPA1-208	ENST00000554573	DSCR9	P59020	149 aa		2.59	□□□□□ -2
RALGAPA1-208	ENST00000554573	SLC10A2	Q12908	348 aa	Predicted RBP	2.59	□□□□□ -2
RALGAPA1-208	ENST00000554573	NRF1	Q16656	503 aa		2.59	□□□□□ -2
RALGAPA1-208	ENST00000554573	AKIRIN2	Q53H80	203 aa		2.59	□□□□□ -2
RALGAPA1-208	ENST00000554573	NEGR1	Q7Z3B1	354 aa		2.59	□□□□□ -2
RALGAPA1-208	ENST00000554573	UBL4B	Q8N7F7	174 aa		2.59	□□□□□ -2
RALGAPA1-208	ENST00000554573	NODAL	Q96S42	347 aa		2.59	□□□□□ -2
RALGAPA1-208	ENST00000554573	APOL4	Q9BPW4	351 aa		2.59	□□□□□ -2
RALGAPA1-208	ENST00000554573	TMED9	Q9BVK6	235 aa		2.59	□□□□□ -2
RALGAPA1-208	ENST00000554573	OR11A1	Q9GZK7	315 aa		2.59	□□□□□ -2
RALGAPA1-208	ENST00000554573	CCDC90B	Q9GZT6	254 aa		2.59	□□□□□ -2
RALGAPA1-208	ENST00000554573	CA10	Q9NS85	328 aa		2.59	□□□□□ -2
RALGAPA1-208	ENST00000554573	OPTC	Q9UBM4	332 aa		2.59	□□□□□ -2
RALGAPA1-208	ENST00000554573	RARRES3	Q9UL19	164 aa		2.59	□□□□□ -2
RALGAPA1-208	ENST00000554573	HDGFL3	Q9Y3E1	203 aa		2.59	□□□□□ -2
RALGAPA1-208	ENST00000554573	HEY1	Q9Y5J3	304 aa		2.59	□□□□□ -2
RALGAPA1-208	ENST00000554573	LAMB2	P55268	1798 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	COL24A1	Q17RW2	1714 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	CLDN25	C9JDP6	229 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	GPR31	O00270	319 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	NDUFS5	O43920	106 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	C6orf47	O95873	294 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	FGF6	P10767	208 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	PFN2	P35080	140 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	NUDT1	P36639	197 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	TTPA	P49638	278 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	SULT1A1	P50225	295 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	VSX2	P58304	361 aa	Predicted RBP	2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	NAA20	P61599	178 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	BTN3A2	P78410	334 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	CXCL6	P80162	114 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	IHH	Q14623	411 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	HERPUD1	Q15011	391 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	RSPO1	Q2MKA7	263 aa	Predicted RBP	2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	SLC25A35	Q3KQZ1	300 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	TTC32	Q5I0X7	151 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	RSBN1	Q5VWQ0	802 aa	Predicted RBP	2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	NFE4	Q86UQ8	179 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	SKA3	Q8IX90	412 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	C11orf53	Q8IXP5	236 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	FAM71E2	Q8N5Q1	922 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	KRTCAP2	Q8N6L1	136 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573		Q8NBF4	154 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	OR10G7	Q8NGN6	311 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	OR52P1P	Q8NH57	321 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	CCL17	Q92583	94 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	RMND5B	Q96G75	393 aa	Predicted RBP	2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	ARHGDIG	Q99819	225 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	SLC17A9	Q9BYT1	436 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	MIXL1	Q9H2W2	232 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	SPANXB1	Q9NS25	103 aa	Predicted RBP	2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	ZNF629	Q9UEG4	869 aa	Predicted RBP	2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	AP4S1	Q9Y587	144 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	CIC	Q96RK0	1608 aa	Predicted RBP	2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	MAST2	Q6P0Q8	1798 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	RIC1	Q4ADV7	1423 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	NHSL1	Q5SYE7	1610 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	TANC1	Q9C0D5	1861 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	FAM172BP	A6NC97	362 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	REM1	O75628	298 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	SNAPIN	O95295	136 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	ATP5G1	P05496	136 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	GIP	P09681	153 aa	Predicted RBP	2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	RPA3	P35244	121 aa	Predicted RBP	2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	MTPN	P58546	118 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	GNG5	P63218	68 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	SRPX	P78539	464 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	PRR3	P79522	188 aa	Known RBP	2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	TRAF2	Q12933	501 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	BAMBI	Q13145	260 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	C1D	Q13901	141 aa	Known RBP	2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	SMCO1	Q147U7	214 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	TRMT12	Q53H54	448 aa	Known RBP	2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	UBE2U	Q5VVX9	321 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	TMED4	Q7Z7H5	227 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	PIM3	Q86V86	326 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	TMEM75	Q8N9X5	138 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	OR10D3	Q8NH80	312 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	ZFP90	Q8TF47	636 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	ITLN1	Q8WWA0	313 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	RGP1	Q92546	391 aa	Predicted RBP	2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	RDH12	Q96NR8	316 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	TMEM243	Q9BU79	118 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	SDF2L1	Q9HCN8	221 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	CARHSP1	Q9Y2V2	147 aa	Known RBP	2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	SNX10	Q9Y5X0	201 aa		2.58	□□□□□ -2
RALGAPA1-208	ENST00000554573	LOXHD1	Q8IVV2	1947 aa		2.57	□□□□□ -2
RALGAPA1-208	ENST00000554573	OTOF	Q9HC10	1997 aa		2.57	□□□□□ -2
RALGAPA1-208	ENST00000554573		A0A087WXM4	84 aa		2.57	□□□□□ -2
RALGAPA1-208	ENST00000554573	C5orf63	A6NC05	138 aa		2.57	□□□□□ -2
RALGAPA1-208	ENST00000554573	C4orf51	C9J302	202 aa		2.57	□□□□□ -2
RALGAPA1-208	ENST00000554573		F5H5K5	113 aa		2.57	□□□□□ -2
RALGAPA1-208	ENST00000554573	PI15	O43692	258 aa		2.57	□□□□□ -2
RALGAPA1-208	ENST00000554573	FABP3	P05413	133 aa		2.57	□□□□□ -2
RALGAPA1-208	ENST00000554573	FBP1	P09467	338 aa		2.57	□□□□□ -2
RALGAPA1-208	ENST00000554573	SNHG28	P0DPA3	235 aa		2.57	□□□□□ -2
RALGAPA1-208	ENST00000554573	CCR6	P51684	374 aa		2.57	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms