RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 HILPDAQ9Y5L2 63 aa9.53□□□□□ -0.88
HDAC4-216ENST00000544989 BUB1B-PAK6H3BSN5 160 aa9.52□□□□□ -0.89
HDAC4-216ENST00000544989 KCNAB3O43448 404 aa9.52□□□□□ -0.89
HDAC4-216ENST00000544989 ORC5O43913 435 aa9.52□□□□□ -0.89
HDAC4-216ENST00000544989 SC5DO75845 299 aa9.52□□□□□ -0.89
HDAC4-216ENST00000544989 ATP6V1G2O95670 118 aa9.52□□□□□ -0.89
HDAC4-216ENST00000544989 UCHL1P09936 223 aa9.52□□□□□ -0.89
HDAC4-216ENST00000544989 HSMCR30P0CW71 290 aa9.52□□□□□ -0.89
HDAC4-216ENST00000544989 MGMTP16455 207 aa9.52□□□□□ -0.89
HDAC4-216ENST00000544989 FUT3P21217 361 aa9.52□□□□□ -0.89
HDAC4-216ENST00000544989 TBCEQ15813 527 aaPredicted RBP9.52□□□□□ -0.89
HDAC4-216ENST00000544989 PLA1AQ53H76 456 aa9.52□□□□□ -0.89
HDAC4-216ENST00000544989 C6orf183Q5T699 404 aa9.52□□□□□ -0.89
HDAC4-216ENST00000544989 LIPKQ5VXJ0 399 aa9.52□□□□□ -0.89
HDAC4-216ENST00000544989 ZNF497Q6ZNH5 498 aa9.52□□□□□ -0.89
HDAC4-216ENST00000544989 LYPD6Q86Y78 171 aa9.52□□□□□ -0.89
HDAC4-216ENST00000544989 KCNG3Q8TAE7 436 aa9.52□□□□□ -0.89
HDAC4-216ENST00000544989 PLPPR1Q8TBJ4 325 aa9.52□□□□□ -0.89
HDAC4-216ENST00000544989 MRGPRDQ8TDS7 321 aa9.52□□□□□ -0.89
HDAC4-216ENST00000544989 RPEQ96AT9 228 aa9.52□□□□□ -0.89
HDAC4-216ENST00000544989 CNBD2Q96M20 576 aa9.52□□□□□ -0.89
HDAC4-216ENST00000544989 SELENOIQ9C0D9 397 aa9.52□□□□□ -0.89
HDAC4-216ENST00000544989 PRSS22Q9GZN4 317 aa9.52□□□□□ -0.89
HDAC4-216ENST00000544989 ZNF286AQ9HBT8 521 aa9.52□□□□□ -0.89
HDAC4-216ENST00000544989 J3QR06 171 aa9.51□□□□□ -0.89
HDAC4-216ENST00000544989 M0QZK8 103 aa9.51□□□□□ -0.89
HDAC4-216ENST00000544989 AIPO00170 330 aa9.51□□□□□ -0.89
HDAC4-216ENST00000544989 SPINT2O43291 252 aa9.51□□□□□ -0.89
HDAC4-216ENST00000544989 BPNT1O95861 308 aa9.51□□□□□ -0.89
HDAC4-216ENST00000544989 CPEP16870 476 aa9.51□□□□□ -0.89
HDAC4-216ENST00000544989 PSMD7P51665 324 aa9.51□□□□□ -0.89
HDAC4-216ENST00000544989 EFNB2P52799 333 aa9.51□□□□□ -0.89
HDAC4-216ENST00000544989 GABARAPL2P60520 117 aa9.51□□□□□ -0.89
HDAC4-216ENST00000544989 MADCAM1Q13477 382 aa9.51□□□□□ -0.89
HDAC4-216ENST00000544989 C1orf100Q5SVJ3 147 aa9.51□□□□□ -0.89
HDAC4-216ENST00000544989 LDLRAD2Q5SZI1 272 aa9.51□□□□□ -0.89
HDAC4-216ENST00000544989 TPTE2P1Q5T6R2 138 aa9.51□□□□□ -0.89
HDAC4-216ENST00000544989 RAB12Q6IQ22 244 aa9.51□□□□□ -0.89
HDAC4-216ENST00000544989 TREML4Q6UXN2 200 aa9.51□□□□□ -0.89
HDAC4-216ENST00000544989 Q6ZTK2 550 aa9.51□□□□□ -0.89
HDAC4-216ENST00000544989 ZNF367Q7RTV3 350 aa9.51□□□□□ -0.89
HDAC4-216ENST00000544989 ZNF554Q86TJ5 538 aa9.51□□□□□ -0.89
HDAC4-216ENST00000544989 Q8N2B8 174 aa9.51□□□□□ -0.89
HDAC4-216ENST00000544989 C8orf31Q8N9H6 132 aa9.51□□□□□ -0.89
HDAC4-216ENST00000544989 OR10X1Q8NGY0 326 aa9.51□□□□□ -0.89
HDAC4-216ENST00000544989 Q96M66 194 aa9.51□□□□□ -0.89
HDAC4-216ENST00000544989 MGLLQ99685 303 aa9.51□□□□□ -0.89
HDAC4-216ENST00000544989 NKX3-1Q99801 234 aaPredicted RBP9.51□□□□□ -0.89
HDAC4-216ENST00000544989 LIN7BQ9HAP6 207 aa9.51□□□□□ -0.89
HDAC4-216ENST00000544989 ACOT13Q9NPJ3 140 aa9.51□□□□□ -0.89
HDAC4-216ENST00000544989 ETAA1Q9NY74 926 aa9.51□□□□□ -0.89
HDAC4-216ENST00000544989 PEX16Q9Y5Y5 336 aa9.51□□□□□ -0.89
HDAC4-216ENST00000544989 A0A1W2PP11 408 aa9.5□□□□□ -0.89
HDAC4-216ENST00000544989 LY6LH3BQJ8 138 aa9.5□□□□□ -0.89
HDAC4-216ENST00000544989 CHST1O43916 411 aa9.5□□□□□ -0.89
HDAC4-216ENST00000544989 PDCD6O75340 191 aa9.5□□□□□ -0.89
HDAC4-216ENST00000544989 PEX14O75381 377 aa9.5□□□□□ -0.89
HDAC4-216ENST00000544989 MT-ND4P03905 459 aa9.5□□□□□ -0.89
HDAC4-216ENST00000544989 LPLP06858 475 aa9.5□□□□□ -0.89
HDAC4-216ENST00000544989 FAM106CPP0CH98 169 aa9.5□□□□□ -0.89
HDAC4-216ENST00000544989 CD37P11049 281 aa9.5□□□□□ -0.89
HDAC4-216ENST00000544989 PAX6P26367 422 aa9.5□□□□□ -0.89
HDAC4-216ENST00000544989 IL3RAP26951 378 aa9.5□□□□□ -0.89
HDAC4-216ENST00000544989 HTR2CP28335 458 aa9.5□□□□□ -0.89
HDAC4-216ENST00000544989 GDNFP39905 211 aa9.5□□□□□ -0.89
HDAC4-216ENST00000544989 RAB7AP51149 207 aa9.5□□□□□ -0.89
HDAC4-216ENST00000544989 RAB13P51153 203 aa9.5□□□□□ -0.89
HDAC4-216ENST00000544989 HERPUD1Q15011 391 aa9.5□□□□□ -0.89
HDAC4-216ENST00000544989 C2orf68Q2NKX9 166 aa9.5□□□□□ -0.89
HDAC4-216ENST00000544989 LRRTM1Q86UE6 522 aa9.5□□□□□ -0.89
HDAC4-216ENST00000544989 THNSL2Q86YJ6 484 aa9.5□□□□□ -0.89
HDAC4-216ENST00000544989 OR8H3Q8N146 312 aa9.5□□□□□ -0.89
HDAC4-216ENST00000544989 SVOPQ8N4V2 548 aa9.5□□□□□ -0.89
HDAC4-216ENST00000544989 OR6M1Q8NGM8 313 aa9.5□□□□□ -0.89
HDAC4-216ENST00000544989 SGCDQ92629 289 aa9.5□□□□□ -0.89
HDAC4-216ENST00000544989 TOMM40LQ969M1 308 aa9.5□□□□□ -0.89
HDAC4-216ENST00000544989 ARL11Q969Q4 196 aa9.5□□□□□ -0.89
HDAC4-216ENST00000544989 NEDD4LQ96PU5 975 aa9.5□□□□□ -0.89
HDAC4-216ENST00000544989 TMEM59Q9BXS4 323 aa9.5□□□□□ -0.89
HDAC4-216ENST00000544989 YTHDF1Q9BYJ9 559 aaKnown RBP9.5□□□□□ -0.89
HDAC4-216ENST00000544989 BANF2Q9H503 90 aa9.5□□□□□ -0.89
HDAC4-216ENST00000544989 TRAPPC2LQ9UL33 140 aa9.5□□□□□ -0.89
HDAC4-216ENST00000544989 PSG11Q9UQ72 335 aa9.5□□□□□ -0.89
HDAC4-216ENST00000544989 LRRC42Q9Y546 428 aa9.5□□□□□ -0.89
HDAC4-216ENST00000544989 FAM172BPA6NC97 362 aa9.49□□□□□ -0.89
HDAC4-216ENST00000544989 SDCBPO00560 298 aaPredicted RBP9.49□□□□□ -0.89
HDAC4-216ENST00000544989 SLC22A1O15245 554 aa9.49□□□□□ -0.89
HDAC4-216ENST00000544989 MPIG6BO95866 241 aa9.49□□□□□ -0.89
HDAC4-216ENST00000544989 SSTR5P35346 364 aa9.49□□□□□ -0.89
HDAC4-216ENST00000544989 ARSJQ5FYB0 599 aaPredicted RBP9.49□□□□□ -0.89
HDAC4-216ENST00000544989 SYT6Q5T7P8 510 aaPredicted RBP9.49□□□□□ -0.89
HDAC4-216ENST00000544989 CCBE1Q6UXH8 406 aaPredicted RBP9.49□□□□□ -0.89
HDAC4-216ENST00000544989 BAIAP2L2Q6UXY1 529 aa9.49□□□□□ -0.89
HDAC4-216ENST00000544989 TMEM219Q86XT9 240 aa9.49□□□□□ -0.89
HDAC4-216ENST00000544989 GAPTQ8N292 157 aa9.49□□□□□ -0.89
HDAC4-216ENST00000544989 LINC00311Q8N616 119 aa9.49□□□□□ -0.89
HDAC4-216ENST00000544989 TMEM104Q8NE00 496 aa9.49□□□□□ -0.89
HDAC4-216ENST00000544989 RFESDQ8TAC1 157 aa9.49□□□□□ -0.89
HDAC4-216ENST00000544989 TMEM203Q969S6 136 aa9.49□□□□□ -0.89
HDAC4-216ENST00000544989 URM1Q9BTM9 101 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms