RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 ASAH2BP0C7U1 165 aa13.11□□□□□ -0.31
SMARCA4-207ENST00000541122 SPATA45Q537H7 98 aa13.11□□□□□ -0.31
SMARCA4-207ENST00000541122 ZNF519Q8TB69 540 aa13.11□□□□□ -0.31
SMARCA4-207ENST00000541122 ATP23Q9Y6H3 246 aa13.11□□□□□ -0.31
SMARCA4-207ENST00000541122 URB1O60287 2271 aaKnown RBP13.11□□□□□ -0.31
SMARCA4-207ENST00000541122 H0Y980 276 aa13.11□□□□□ -0.31
SMARCA4-207ENST00000541122 HBZP02008 142 aa13.11□□□□□ -0.31
SMARCA4-207ENST00000541122 PMELP40967 661 aa13.11□□□□□ -0.31
SMARCA4-207ENST00000541122 RAC3P60763 192 aa13.11□□□□□ -0.31
SMARCA4-207ENST00000541122 Q5BKY6 102 aa13.11□□□□□ -0.31
SMARCA4-207ENST00000541122 RFLNBQ8N5W9 214 aa13.11□□□□□ -0.31
SMARCA4-207ENST00000541122 OR8G5Q8NG78 346 aa13.11□□□□□ -0.31
SMARCA4-207ENST00000541122 TP53RKQ96S44 253 aa13.11□□□□□ -0.31
SMARCA4-207ENST00000541122 A0A1B0GV90 55 aa13.11□□□□□ -0.31
SMARCA4-207ENST00000541122 PRSS1P07477 247 aa13.11□□□□□ -0.31
SMARCA4-207ENST00000541122 PRF1P14222 555 aa13.11□□□□□ -0.31
SMARCA4-207ENST00000541122 OR52L2PQ8NGH6 319 aa13.11□□□□□ -0.31
SMARCA4-207ENST00000541122 DPF1Q92782 380 aa13.11□□□□□ -0.31
SMARCA4-207ENST00000541122 TRIP11Q15643 1979 aa13.11□□□□□ -0.31
SMARCA4-207ENST00000541122 ZNF729A6NN14 1252 aaPredicted RBP13.1□□□□□ -0.31
SMARCA4-207ENST00000541122 METTL12A8MUP2 240 aa13.1□□□□□ -0.31
SMARCA4-207ENST00000541122 LRRC10Q5BKY1 277 aa13.1□□□□□ -0.31
SMARCA4-207ENST00000541122 WIPI1Q5MNZ9 446 aaPredicted RBP13.1□□□□□ -0.31
SMARCA4-207ENST00000541122 LEMD1Q68G75 181 aa13.1□□□□□ -0.31
SMARCA4-207ENST00000541122 GAL3ST2Q9H3Q3 398 aa13.1□□□□□ -0.31
SMARCA4-207ENST00000541122 IL19Q9UHD0 177 aa13.1□□□□□ -0.31
SMARCA4-207ENST00000541122 ZFP30Q9Y2G7 519 aa13.1□□□□□ -0.31
SMARCA4-207ENST00000541122 TGIF2-C20orf24A0A0A6YYL0 155 aa13.1□□□□□ -0.31
SMARCA4-207ENST00000541122 HLA-DQA1P01909 254 aa13.1□□□□□ -0.31
SMARCA4-207ENST00000541122 C1QCP02747 245 aa13.1□□□□□ -0.31
SMARCA4-207ENST00000541122 Q56UQ5 140 aa13.1□□□□□ -0.31
SMARCA4-207ENST00000541122 SLC36A1Q7Z2H8 476 aa13.1□□□□□ -0.31
SMARCA4-207ENST00000541122 ZPLD1Q8TCW7 415 aa13.1□□□□□ -0.31
SMARCA4-207ENST00000541122 TMEM222Q9H0R3 208 aa13.1□□□□□ -0.31
SMARCA4-207ENST00000541122 CXXC4Q9H2H0 198 aa13.1□□□□□ -0.31
SMARCA4-207ENST00000541122 SERGEFQ9UGK8 458 aa13.1□□□□□ -0.31
SMARCA4-207ENST00000541122 MBD1Q9UIS9 605 aaPredicted RBP13.1□□□□□ -0.31
SMARCA4-207ENST00000541122 TRBV23-1A0A0A0MS06 115 aa13.1□□□□□ -0.31
SMARCA4-207ENST00000541122 A0A0B4J293 547 aa13.1□□□□□ -0.31
SMARCA4-207ENST00000541122 A0A0U1RQV5 110 aa13.1□□□□□ -0.31
SMARCA4-207ENST00000541122 RBP4P02753 201 aa13.1□□□□□ -0.31
SMARCA4-207ENST00000541122 ZXDAP98168 799 aa13.1□□□□□ -0.31
SMARCA4-207ENST00000541122 EIF3IQ13347 325 aaKnown RBP13.1□□□□□ -0.31
SMARCA4-207ENST00000541122 SPINK9Q5DT21 86 aa13.1□□□□□ -0.31
SMARCA4-207ENST00000541122 KISS1RQ969F8 398 aaPredicted RBP13.1□□□□□ -0.31
SMARCA4-207ENST00000541122 PARD6GQ9BYG4 376 aaPredicted RBP13.1□□□□□ -0.31
SMARCA4-207ENST00000541122 IL36GQ9NZH8 169 aa13.1□□□□□ -0.31
SMARCA4-207ENST00000541122 NPTNQ9Y639 398 aa13.1□□□□□ -0.31
SMARCA4-207ENST00000541122 KCNAB3O43448 404 aa13.1□□□□□ -0.31
SMARCA4-207ENST00000541122 NDUFB3O43676 98 aa13.1□□□□□ -0.31
SMARCA4-207ENST00000541122 UPK3AO75631 287 aa13.1□□□□□ -0.31
SMARCA4-207ENST00000541122 CCL11P51671 97 aa13.1□□□□□ -0.31
SMARCA4-207ENST00000541122 TMEM116Q8NCL8 245 aa13.1□□□□□ -0.31
SMARCA4-207ENST00000541122 MISP3Q96FF7 219 aa13.1□□□□□ -0.31
SMARCA4-207ENST00000541122 PERPQ96FX8 193 aa13.1□□□□□ -0.31
SMARCA4-207ENST00000541122 PRNDQ9UKY0 176 aa13.1□□□□□ -0.31
SMARCA4-207ENST00000541122 ZNF785A8K8V0 405 aa13.09□□□□□ -0.31
SMARCA4-207ENST00000541122 J3QT63 122 aa13.09□□□□□ -0.31
SMARCA4-207ENST00000541122 ZP1P60852 638 aa13.09□□□□□ -0.31
SMARCA4-207ENST00000541122 FDX2Q6P4F2 183 aa13.09□□□□□ -0.31
SMARCA4-207ENST00000541122 TEPPQ6URK8 271 aa13.09□□□□□ -0.31
SMARCA4-207ENST00000541122 TMEM183AQ8IXX5 376 aa13.09□□□□□ -0.31
SMARCA4-207ENST00000541122 RFESDQ8TAC1 157 aa13.09□□□□□ -0.31
SMARCA4-207ENST00000541122 PCGF1Q9BSM1 259 aa13.09□□□□□ -0.31
SMARCA4-207ENST00000541122 IGHV5-51A0A0C4DH38 117 aa13.09□□□□□ -0.31
SMARCA4-207ENST00000541122 DEFB108AA8MXU0 73 aa13.09□□□□□ -0.31
SMARCA4-207ENST00000541122 TRGC1P0CF51 173 aa13.09□□□□□ -0.31
SMARCA4-207ENST00000541122 DRD3P35462 400 aa13.09□□□□□ -0.31
SMARCA4-207ENST00000541122 MRGPRDQ8TDS7 321 aa13.09□□□□□ -0.31
SMARCA4-207ENST00000541122 SAP30LQ9HAJ7 183 aa13.09□□□□□ -0.31
SMARCA4-207ENST00000541122 H0YL77 283 aa13.09□□□□□ -0.31
SMARCA4-207ENST00000541122 KLK2P20151 261 aa13.09□□□□□ -0.31
SMARCA4-207ENST00000541122 HERVK_113P61574 105 aa13.09□□□□□ -0.31
SMARCA4-207ENST00000541122 RND3P61587 244 aa13.09□□□□□ -0.31
SMARCA4-207ENST00000541122 PIN1P1O15428 100 aa13.09□□□□□ -0.31
SMARCA4-207ENST00000541122 DXOO77932 396 aaKnown RBP13.09□□□□□ -0.31
SMARCA4-207ENST00000541122 CSN3P07498 182 aa13.09□□□□□ -0.31
SMARCA4-207ENST00000541122 RUNX1Q01196 453 aa13.09□□□□□ -0.31
SMARCA4-207ENST00000541122 APCDD1LQ8NCL9 501 aa13.09□□□□□ -0.31
SMARCA4-207ENST00000541122 OR10D3Q8NH80 312 aa13.09□□□□□ -0.31
SMARCA4-207ENST00000541122 DCAF16Q9NXF7 216 aa13.09□□□□□ -0.31
SMARCA4-207ENST00000541122 GAGE10A6NGK3 116 aa13.08□□□□□ -0.32
SMARCA4-207ENST00000541122 DNASE2O00115 360 aaPredicted RBP13.08□□□□□ -0.32
SMARCA4-207ENST00000541122 GABRG2P18507 467 aa13.08□□□□□ -0.32
SMARCA4-207ENST00000541122 RBM11P57052 281 aaKnown RBP13.08□□□□□ -0.32
SMARCA4-207ENST00000541122 RPS11P62280 158 aaKnown RBP eCLIP13.08□□□□□ -0.32
SMARCA4-207ENST00000541122 DOLPP1Q86YN1 238 aa13.08□□□□□ -0.32
SMARCA4-207ENST00000541122 OR5A2Q8NGI9 324 aa13.08□□□□□ -0.32
SMARCA4-207ENST00000541122 DNPH1O43598 174 aa13.08□□□□□ -0.32
SMARCA4-207ENST00000541122 PSG2P11465 335 aa13.08□□□□□ -0.32
SMARCA4-207ENST00000541122 TRA2AQ13595 282 aaKnown RBP eCLIP13.08□□□□□ -0.328e-8■■■□□ 15.5
SMARCA4-207ENST00000541122 ZNF600Q6ZNG1 722 aa13.08□□□□□ -0.32
SMARCA4-207ENST00000541122 GNRHR2Q96P88 292 aa13.08□□□□□ -0.32
SMARCA4-207ENST00000541122 FOXQ1Q9C009 403 aa13.08□□□□□ -0.32
SMARCA4-207ENST00000541122 NGFRP08138 427 aa13.08□□□□□ -0.32
SMARCA4-207ENST00000541122 COL8A1P27658 744 aa13.08□□□□□ -0.32
SMARCA4-207ENST00000541122 TMEM240Q5SV17 173 aa13.08□□□□□ -0.32
SMARCA4-207ENST00000541122 OR2Z1Q8NG97 314 aa13.08□□□□□ -0.32
SMARCA4-207ENST00000541122 hADV38S2A0JD32 116 aa13.08□□□□□ -0.32
SMARCA4-207ENST00000541122 MGAT2Q10469 447 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms