RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 KCNIP1Q9NZI2 227 aa8.34□□□□□ -1.07
CDCA3-208ENST00000540683 ZMAT5Q9UDW3 170 aaKnown RBP8.34□□□□□ -1.07
CDCA3-208ENST00000540683 PSORS1C1Q9UIG5 152 aa8.34□□□□□ -1.07
CDCA3-208ENST00000540683 MRPS28Q9Y2Q9 187 aaKnown RBP8.34□□□□□ -1.07
CDCA3-208ENST00000540683 AIPO00170 330 aa8.33□□□□□ -1.08
CDCA3-208ENST00000540683 FGF16O43320 207 aa8.33□□□□□ -1.08
CDCA3-208ENST00000540683 RGS11O94810 467 aa8.33□□□□□ -1.08
CDCA3-208ENST00000540683 CDRT1O95170 752 aa8.33□□□□□ -1.08
CDCA3-208ENST00000540683 TSPAN15O95858 294 aa8.33□□□□□ -1.08
CDCA3-208ENST00000540683 PF4V1P10720 104 aa8.33□□□□□ -1.08
CDCA3-208ENST00000540683 IGFBP3P17936 291 aaPredicted RBP8.33□□□□□ -1.08
CDCA3-208ENST00000540683 CELP19835 753 aa8.33□□□□□ -1.08
CDCA3-208ENST00000540683 PSMA1P25786 263 aaKnown RBP8.33□□□□□ -1.08
CDCA3-208ENST00000540683 SLC35B1P78383 322 aa8.33□□□□□ -1.08
CDCA3-208ENST00000540683 HES1Q14469 280 aa8.33□□□□□ -1.08
CDCA3-208ENST00000540683 C17orf58Q2M2W7 97 aa8.33□□□□□ -1.08
CDCA3-208ENST00000540683 PIGYQ3MUY2 71 aa8.33□□□□□ -1.08
CDCA3-208ENST00000540683 GLT8D1Q68CQ7 371 aa8.33□□□□□ -1.08
CDCA3-208ENST00000540683 CCBE1Q6UXH8 406 aaPredicted RBP8.33□□□□□ -1.08
CDCA3-208ENST00000540683 AHSA2Q719I0 299 aa8.33□□□□□ -1.08
CDCA3-208ENST00000540683 FOXRED2Q8IWF2 684 aa8.33□□□□□ -1.08
CDCA3-208ENST00000540683 LINC00311Q8N616 119 aa8.33□□□□□ -1.08
CDCA3-208ENST00000540683 OR5AU1Q8NGC0 362 aa8.33□□□□□ -1.08
CDCA3-208ENST00000540683 OR51D1Q8NGF3 324 aa8.33□□□□□ -1.08
CDCA3-208ENST00000540683 OR8H1Q8NGG4 311 aa8.33□□□□□ -1.08
CDCA3-208ENST00000540683 MRGPRDQ8TDS7 321 aa8.33□□□□□ -1.08
CDCA3-208ENST00000540683 RGP1Q92546 391 aaPredicted RBP8.33□□□□□ -1.08
CDCA3-208ENST00000540683 PHYHIPQ92561 330 aa8.33□□□□□ -1.08
CDCA3-208ENST00000540683 R3HDM4Q96D70 268 aa8.33□□□□□ -1.08
CDCA3-208ENST00000540683 PPIL3Q9H2H8 161 aaKnown RBP8.33□□□□□ -1.08
CDCA3-208ENST00000540683 TRAPPC2LQ9UL33 140 aa8.33□□□□□ -1.08
CDCA3-208ENST00000540683 SIGLEC9Q9Y336 463 aa8.33□□□□□ -1.08
CDCA3-208ENST00000540683 TPRKBQ9Y3C4 175 aa8.33□□□□□ -1.08
CDCA3-208ENST00000540683 TSSC4Q9Y5U2 329 aaPredicted RBP8.33□□□□□ -1.08
CDCA3-208ENST00000540683 NOTCH1P46531 2555 aa8.33□□□□□ -1.08
CDCA3-208ENST00000540683 TRBV5-7A0A0A0MS05 114 aa8.32□□□□□ -1.08
CDCA3-208ENST00000540683 LY6LH3BQJ8 138 aa8.32□□□□□ -1.08
CDCA3-208ENST00000540683 SDCBPO00560 298 aaPredicted RBP8.32□□□□□ -1.08
CDCA3-208ENST00000540683 GEMIN2O14893 280 aaKnown RBP8.32□□□□□ -1.08
CDCA3-208ENST00000540683 EREGO14944 169 aa8.32□□□□□ -1.08
CDCA3-208ENST00000540683 CGB3P0DN86 165 aa8.32□□□□□ -1.08
CDCA3-208ENST00000540683 CGB7P0DN87 165 aa8.32□□□□□ -1.08
CDCA3-208ENST00000540683 TMEM11P17152 192 aa8.32□□□□□ -1.08
CDCA3-208ENST00000540683 FUT3P21217 361 aa8.32□□□□□ -1.08
CDCA3-208ENST00000540683 HSPA13P48723 471 aa8.32□□□□□ -1.08
CDCA3-208ENST00000540683 ZNF816Q0VGE8 651 aaPredicted RBP8.32□□□□□ -1.08
CDCA3-208ENST00000540683 NSUN5P1Q3KNT7 163 aa8.32□□□□□ -1.08
CDCA3-208ENST00000540683 ABCA11PQ4W5N1 156 aa8.32□□□□□ -1.08
CDCA3-208ENST00000540683 GLIPR1L1Q6UWM5 242 aa8.32□□□□□ -1.08
CDCA3-208ENST00000540683 ZNF497Q6ZNH5 498 aa8.32□□□□□ -1.08
CDCA3-208ENST00000540683 NANOGP1Q8N7R0 232 aa8.32□□□□□ -1.08
CDCA3-208ENST00000540683 BPIFB6Q8NFQ5 453 aa8.32□□□□□ -1.08
CDCA3-208ENST00000540683 OR13A1Q8NGR1 328 aa8.32□□□□□ -1.08
CDCA3-208ENST00000540683 OR10K1Q8NGX5 313 aa8.32□□□□□ -1.08
CDCA3-208ENST00000540683 CHPT1Q8WUD6 406 aa8.32□□□□□ -1.08
CDCA3-208ENST00000540683 ARL11Q969Q4 196 aa8.32□□□□□ -1.08
CDCA3-208ENST00000540683 PGLYRP3Q96LB9 341 aa8.32□□□□□ -1.08
CDCA3-208ENST00000540683 DERL3Q96Q80 235 aa8.32□□□□□ -1.08
CDCA3-208ENST00000540683 OR14A2Q96R54 314 aa8.32□□□□□ -1.08
CDCA3-208ENST00000540683 RSRP1Q9BUV0 290 aa8.32□□□□□ -1.08
CDCA3-208ENST00000540683 ETAA1Q9NY74 926 aa8.32□□□□□ -1.08
CDCA3-208ENST00000540683 GNG12Q9UBI6 72 aa8.32□□□□□ -1.08
CDCA3-208ENST00000540683 BLOC1S6Q9UL45 172 aa8.32□□□□□ -1.08
CDCA3-208ENST00000540683 PSG11Q9UQ72 335 aa8.32□□□□□ -1.08
CDCA3-208ENST00000540683 TCRBV4S1A1TA0A5B7 111 aa8.31□□□□□ -1.08
CDCA3-208ENST00000540683 FAM90A9PA6NNJ1 464 aa8.31□□□□□ -1.08
CDCA3-208ENST00000540683 J3QL48 77 aa8.31□□□□□ -1.08
CDCA3-208ENST00000540683 HSD17B6O14756 317 aa8.31□□□□□ -1.08
CDCA3-208ENST00000540683 KCNAB3O43448 404 aa8.31□□□□□ -1.08
CDCA3-208ENST00000540683 RRP9O43818 475 aaKnown RBP8.31□□□□□ -1.08
CDCA3-208ENST00000540683 CRTAPO75718 401 aaPredicted RBP8.31□□□□□ -1.08
CDCA3-208ENST00000540683 MMP23AO75900 390 aa8.31□□□□□ -1.08
CDCA3-208ENST00000540683 ARL6IP5O75915 188 aa8.31□□□□□ -1.08
CDCA3-208ENST00000540683 BPNT1O95861 308 aa8.31□□□□□ -1.08
CDCA3-208ENST00000540683 PF4P02776 101 aa8.31□□□□□ -1.08
CDCA3-208ENST00000540683 CD33P20138 364 aa8.31□□□□□ -1.08
CDCA3-208ENST00000540683 PAX6P26367 422 aa8.31□□□□□ -1.08
CDCA3-208ENST00000540683 PSMD7P51665 324 aa8.31□□□□□ -1.08
CDCA3-208ENST00000540683 BLCAPP62952 87 aa8.31□□□□□ -1.08
CDCA3-208ENST00000540683 SLC35A2P78381 396 aa8.31□□□□□ -1.08
CDCA3-208ENST00000540683 SPHARQ15513 63 aa8.31□□□□□ -1.08
CDCA3-208ENST00000540683 C9orf152Q5JTZ5 239 aa8.31□□□□□ -1.08
CDCA3-208ENST00000540683 XAF1Q6GPH4 301 aa8.31□□□□□ -1.08
CDCA3-208ENST00000540683 RAB12Q6IQ22 244 aa8.31□□□□□ -1.08
CDCA3-208ENST00000540683 OR2T10Q8NGZ9 312 aa8.31□□□□□ -1.08
CDCA3-208ENST00000540683 KCNG3Q8TAE7 436 aa8.31□□□□□ -1.08
CDCA3-208ENST00000540683 FBLIM1Q8WUP2 373 aa8.31□□□□□ -1.08
CDCA3-208ENST00000540683 TFAP2CQ92754 450 aa8.31□□□□□ -1.08
CDCA3-208ENST00000540683 DPF1Q92782 380 aa8.31□□□□□ -1.08
CDCA3-208ENST00000540683 MUL1Q969V5 352 aa8.31□□□□□ -1.08
CDCA3-208ENST00000540683 NEDD4LQ96PU5 975 aa8.31□□□□□ -1.08
CDCA3-208ENST00000540683 GHITMQ9H3K2 345 aa8.31□□□□□ -1.08
CDCA3-208ENST00000540683 RIMS4Q9H426 269 aaPredicted RBP8.31□□□□□ -1.08
CDCA3-208ENST00000540683 ABRACLQ9P1F3 81 aa8.31□□□□□ -1.08
CDCA3-208ENST00000540683 RCC2Q9P258 522 aaKnown RBP8.31□□□□□ -1.08
CDCA3-208ENST00000540683 CLEC2DQ9UHP7 191 aa8.31□□□□□ -1.08
CDCA3-208ENST00000540683 MGAT4AQ9UM21 535 aa8.31□□□□□ -1.08
CDCA3-208ENST00000540683 FAM172BPA6NC97 362 aa8.3□□□□□ -1.08
CDCA3-208ENST00000540683 H0YHG0 523 aa8.3□□□□□ -1.08
CDCA3-208ENST00000540683 PDCD6O75340 191 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms