RNA–Protein interactions for RNA: ENST00000539168.1

CDH5-202, Transcript of cadherin 5, humanhuman

TSL 2 BASIC

Gene CDH5, Length 1,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-202ENST00000539168 LURAP1Q96LR2 239 aa17.04■□□□□ 0.32
CDH5-202ENST00000539168 TMEM204Q9BSN7 226 aa17.04■□□□□ 0.32
CDH5-202ENST00000539168 SAP30LQ9HAJ7 183 aa17.04■□□□□ 0.32
CDH5-202ENST00000539168 CHD3Q12873 2000 aaKnown RBP17.04■□□□□ 0.32
CDH5-202ENST00000539168 ATRXP46100 2492 aa17.04■□□□□ 0.32
CDH5-202ENST00000539168 IGKV1D-17A0A075B6S4 117 aa17.04■□□□□ 0.32
CDH5-202ENST00000539168 PIGBOS1A0A0B4J2F0 54 aa17.04■□□□□ 0.32
CDH5-202ENST00000539168 ZNF737O75373 536 aa17.04■□□□□ 0.32
CDH5-202ENST00000539168 GRNP28799 593 aaKnown RBP17.04■□□□□ 0.32
CDH5-202ENST00000539168 GABRA2P47869 451 aa17.04■□□□□ 0.32
CDH5-202ENST00000539168 H2BFSP57053 126 aa17.04■□□□□ 0.32
CDH5-202ENST00000539168 RND3P61587 244 aa17.04■□□□□ 0.32
CDH5-202ENST00000539168 TEX36Q5VZQ5 186 aa17.04■□□□□ 0.32
CDH5-202ENST00000539168 H1FOOQ8IZA3 346 aaPredicted RBP17.04■□□□□ 0.32
CDH5-202ENST00000539168 ANGPTL6Q8NI99 470 aa17.04■□□□□ 0.32
CDH5-202ENST00000539168 RTN4IP1Q8WWV3 396 aaPredicted RBP17.04■□□□□ 0.32
CDH5-202ENST00000539168 SUCNR1Q9BXA5 334 aa17.04■□□□□ 0.32
CDH5-202ENST00000539168 FAM234AQ9H0X4 552 aa17.04■□□□□ 0.32
CDH5-202ENST00000539168 NAA60Q9H7X0 242 aa17.04■□□□□ 0.32
CDH5-202ENST00000539168 RAB9BQ9NP90 201 aa17.04■□□□□ 0.32
CDH5-202ENST00000539168 SLC2A9Q9NRM0 540 aa17.04■□□□□ 0.32
CDH5-202ENST00000539168 OR2W1Q9Y3N9 320 aa17.04■□□□□ 0.32
CDH5-202ENST00000539168 IGKV1-6A0A0C4DH72 117 aa17.03■□□□□ 0.32
CDH5-202ENST00000539168 SMLR1H3BR10 107 aa17.03■□□□□ 0.32
CDH5-202ENST00000539168 GNLYP22749 145 aa17.03■□□□□ 0.32
CDH5-202ENST00000539168 ZNF672Q499Z4 452 aaPredicted RBP17.03■□□□□ 0.32
CDH5-202ENST00000539168 SPRNQ5BIV9 151 aa17.03■□□□□ 0.32
CDH5-202ENST00000539168 KCTD9Q7L273 389 aa17.03■□□□□ 0.32
CDH5-202ENST00000539168 ZBTB8BQ8NAP8 495 aaPredicted RBP17.03■□□□□ 0.32
CDH5-202ENST00000539168 SDSLQ96GA7 329 aa17.03■□□□□ 0.32
CDH5-202ENST00000539168 PDCD10Q9BUL8 212 aa17.03■□□□□ 0.32
CDH5-202ENST00000539168 SHARPINQ9H0F6 387 aa17.03■□□□□ 0.32
CDH5-202ENST00000539168 TAF9BQ9HBM6 251 aa17.03■□□□□ 0.32
CDH5-202ENST00000539168 KIF25Q9UIL4 384 aa17.03■□□□□ 0.32
CDH5-202ENST00000539168 K7N7A8 449 aa17.02■□□□□ 0.32
CDH5-202ENST00000539168 GPR31O00270 319 aa17.02■□□□□ 0.32
CDH5-202ENST00000539168 CD8AP01732 235 aa17.02■□□□□ 0.32
CDH5-202ENST00000539168 C4BPBP20851 252 aa17.02■□□□□ 0.32
CDH5-202ENST00000539168 SNRPD2P62316 118 aaKnown RBP17.02■□□□□ 0.32
CDH5-202ENST00000539168 CCL8P80075 99 aa17.02■□□□□ 0.32
CDH5-202ENST00000539168 AESQ08117 197 aa17.02■□□□□ 0.32
CDH5-202ENST00000539168 CDSNQ15517 529 aa17.02■□□□□ 0.32
CDH5-202ENST00000539168 SLC9A3R2Q15599 337 aa17.02■□□□□ 0.32
CDH5-202ENST00000539168 C2orf68Q2NKX9 166 aa17.02■□□□□ 0.32
CDH5-202ENST00000539168 LY6G6FQ5SQ64 297 aa17.02■□□□□ 0.32
CDH5-202ENST00000539168 GSG1LQ6UXU4 331 aa17.02■□□□□ 0.32
CDH5-202ENST00000539168 CMTM1Q8IZ96 169 aa17.02■□□□□ 0.32
CDH5-202ENST00000539168 GALMQ96C23 342 aa17.02■□□□□ 0.32
CDH5-202ENST00000539168 COQ2Q96H96 371 aa17.02■□□□□ 0.32
CDH5-202ENST00000539168 SLC5A7Q9GZV3 580 aa17.02■□□□□ 0.32
CDH5-202ENST00000539168 DNTTIP1Q9H147 329 aa17.02■□□□□ 0.32
CDH5-202ENST00000539168 COMMD9Q9P000 198 aa17.02■□□□□ 0.32
CDH5-202ENST00000539168 PKD1L2Q7Z442 2459 aa17.02■□□□□ 0.31
CDH5-202ENST00000539168 DSPP15924 2871 aaKnown RBP17.01■□□□□ 0.31
CDH5-202ENST00000539168 TRAV38-1A0A0B4J264 116 aa17.01■□□□□ 0.31
CDH5-202ENST00000539168 DEFB108AA8MXU0 73 aa17.01■□□□□ 0.31
CDH5-202ENST00000539168 HSPA12AO43301 675 aa17.01■□□□□ 0.31
CDH5-202ENST00000539168 GZMHP20718 246 aa17.01■□□□□ 0.31
CDH5-202ENST00000539168 SRPXP78539 464 aa17.01■□□□□ 0.31
CDH5-202ENST00000539168 STUMQ69YW2 141 aa17.01■□□□□ 0.31
CDH5-202ENST00000539168 FAM216AQ8WUB2 273 aa17.01■□□□□ 0.31
CDH5-202ENST00000539168 ZNF665Q9H7R5 613 aa17.01■□□□□ 0.31
CDH5-202ENST00000539168 B3GALNT1O75752 331 aa17.01■□□□□ 0.31
CDH5-202ENST00000539168 SIX6O95475 246 aa17.01■□□□□ 0.31
CDH5-202ENST00000539168 HEXAP06865 529 aa17.01■□□□□ 0.31
CDH5-202ENST00000539168 IL2RGP31785 369 aa17.01■□□□□ 0.31
CDH5-202ENST00000539168 SNTB1Q13884 538 aaKnown RBP17.01■□□□□ 0.31
CDH5-202ENST00000539168 MUC15Q8N387 334 aa17.01■□□□□ 0.31
CDH5-202ENST00000539168 ITLN2Q8WWU7 325 aaPredicted RBP17.01■□□□□ 0.31
CDH5-202ENST00000539168 IL1F10Q8WWZ1 152 aa17.01■□□□□ 0.31
CDH5-202ENST00000539168 TOLLIPQ9H0E2 274 aa17.01■□□□□ 0.31
CDH5-202ENST00000539168 LGALS8O00214 317 aa17■□□□□ 0.31
CDH5-202ENST00000539168 GNRHRP30968 328 aa17■□□□□ 0.31
CDH5-202ENST00000539168 CD80P33681 288 aa17■□□□□ 0.31
CDH5-202ENST00000539168 LUMP51884 338 aaPredicted RBP17■□□□□ 0.31
CDH5-202ENST00000539168 SWI5Q1ZZU3 235 aa17■□□□□ 0.31
CDH5-202ENST00000539168 MST1LQ2TV78 715 aa17■□□□□ 0.31
CDH5-202ENST00000539168 DCAF12L2Q5VW00 463 aa17■□□□□ 0.31
CDH5-202ENST00000539168 SECTM1Q8WVN6 248 aa17■□□□□ 0.31
CDH5-202ENST00000539168 AKR1E2Q96JD6 320 aa17■□□□□ 0.31
CDH5-202ENST00000539168 OR6C3Q9NZP0 311 aa17■□□□□ 0.31
CDH5-202ENST00000539168 METRNQ9UJH8 293 aa17■□□□□ 0.31
CDH5-202ENST00000539168 IGHV3OR15-7A0A075B7D8 119 aa16.99■□□□□ 0.31
CDH5-202ENST00000539168 NKX6-3A6NJ46 265 aa16.99■□□□□ 0.31
CDH5-202ENST00000539168 HMSDA8MTL9 139 aa16.99■□□□□ 0.31
CDH5-202ENST00000539168 SPINT2O43291 252 aa16.99■□□□□ 0.31
CDH5-202ENST00000539168 ZNF205O95201 554 aa16.99■□□□□ 0.31
CDH5-202ENST00000539168 CYB5R3P00387 301 aaPredicted RBP16.99■□□□□ 0.31
CDH5-202ENST00000539168 LOXP28300 417 aaPredicted RBP16.99■□□□□ 0.31
CDH5-202ENST00000539168 CR1LQ2VPA4 569 aa16.99■□□□□ 0.31
CDH5-202ENST00000539168 LRTM2Q8N967 370 aa16.99■□□□□ 0.31
CDH5-202ENST00000539168 OR10V1Q8NGI7 309 aa16.99■□□□□ 0.31
CDH5-202ENST00000539168 NEUROG1Q92886 237 aa16.99■□□□□ 0.31
CDH5-202ENST00000539168 NINJ1Q92982 152 aa16.99■□□□□ 0.31
CDH5-202ENST00000539168 NMES1Q9C002 83 aa16.99■□□□□ 0.31
CDH5-202ENST00000539168 TPRP12270 2363 aaKnown RBP16.99■□□□□ 0.31
CDH5-202ENST00000539168 COL6A6A6NMZ7 2263 aa16.98■□□□□ 0.31
CDH5-202ENST00000539168 C5orf51A6NDU8 294 aa16.98■□□□□ 0.31
CDH5-202ENST00000539168 MPPED1O15442 326 aa16.98■□□□□ 0.31
CDH5-202ENST00000539168 IFNA21P01568 189 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms