RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 FAM90A5PA8MXJ8 464 aa14.49□□□□□ -0.09
TNFRSF1A-209ENST00000536717 FAM90A23PA8MXZ1 464 aa14.49□□□□□ -0.09
TNFRSF1A-209ENST00000536717 H3BMQ9 156 aa14.49□□□□□ -0.09
TNFRSF1A-209ENST00000536717 H3BUX3 64 aa14.49□□□□□ -0.09
TNFRSF1A-209ENST00000536717 FAM90A15PP0C7V4 464 aa14.49□□□□□ -0.09
TNFRSF1A-209ENST00000536717 FAM90A13PP0C7W8 464 aa14.49□□□□□ -0.09
TNFRSF1A-209ENST00000536717 FAM90A14PP0C7W9 464 aa14.49□□□□□ -0.09
TNFRSF1A-209ENST00000536717 FAM90A24PP0C7X0 464 aa14.49□□□□□ -0.09
TNFRSF1A-209ENST00000536717 IGHV1-8P0DP01 117 aa14.49□□□□□ -0.09
TNFRSF1A-209ENST00000536717 RORCP51449 518 aa14.49□□□□□ -0.09
TNFRSF1A-209ENST00000536717 SCAND1P57086 179 aa14.49□□□□□ -0.09
TNFRSF1A-209ENST00000536717 RPS27AP62979 156 aaKnown RBP14.49□□□□□ -0.09
TNFRSF1A-209ENST00000536717 SRSF4Q08170 494 aaKnown RBP14.49□□□□□ -0.09
TNFRSF1A-209ENST00000536717 FAM189A2Q15884 450 aa14.49□□□□□ -0.09
TNFRSF1A-209ENST00000536717 Q6P435 159 aa14.49□□□□□ -0.09
TNFRSF1A-209ENST00000536717 Q6ZSV7 163 aa14.49□□□□□ -0.09
TNFRSF1A-209ENST00000536717 LHFPL4Q7Z7J7 247 aa14.49□□□□□ -0.09
TNFRSF1A-209ENST00000536717 LINC01006Q8NI28 216 aa14.49□□□□□ -0.09
TNFRSF1A-209ENST00000536717 Q96M66 194 aa14.49□□□□□ -0.09
TNFRSF1A-209ENST00000536717 NDUFA13Q9P0J0 144 aa14.49□□□□□ -0.09
TNFRSF1A-209ENST00000536717 RAB22AQ9UL26 194 aa14.49□□□□□ -0.09
TNFRSF1A-209ENST00000536717 ODF3BA8MYP8 253 aa14.48□□□□□ -0.09
TNFRSF1A-209ENST00000536717 H3BUI4 141 aa14.48□□□□□ -0.09
TNFRSF1A-209ENST00000536717 LDLRAD4O15165 306 aa14.48□□□□□ -0.09
TNFRSF1A-209ENST00000536717 ERP29P30040 261 aaKnown RBP14.48□□□□□ -0.09
TNFRSF1A-209ENST00000536717 SPCS2Q15005 226 aa14.48□□□□□ -0.09
TNFRSF1A-209ENST00000536717 LDLRAD2Q5SZI1 272 aa14.48□□□□□ -0.09
TNFRSF1A-209ENST00000536717 DHRS7BQ6IAN0 325 aaPredicted RBP14.48□□□□□ -0.09
TNFRSF1A-209ENST00000536717 RBM38Q9H0Z9 239 aaKnown RBP14.48□□□□□ -0.09
TNFRSF1A-209ENST00000536717 IFT22Q9H7X7 185 aa14.48□□□□□ -0.09
TNFRSF1A-209ENST00000536717 SPACA1Q9HBV2 294 aa14.48□□□□□ -0.09
TNFRSF1A-209ENST00000536717 ABRACLQ9P1F3 81 aa14.48□□□□□ -0.09
TNFRSF1A-209ENST00000536717 RSL24D1Q9UHA3 163 aaKnown RBP14.48□□□□□ -0.09
TNFRSF1A-209ENST00000536717 ZNF701M0R085 212 aaPredicted RBP14.47□□□□□ -0.09
TNFRSF1A-209ENST00000536717 SLC33A1O00400 549 aaPredicted RBP14.47□□□□□ -0.09
TNFRSF1A-209ENST00000536717 SNRPBP14678 240 aaKnown RBP14.47□□□□□ -0.09
TNFRSF1A-209ENST00000536717 RAB6AP20340 208 aa14.47□□□□□ -0.09
TNFRSF1A-209ENST00000536717 P2RX3P56373 397 aa14.47□□□□□ -0.09
TNFRSF1A-209ENST00000536717 LGALS4P56470 323 aa14.47□□□□□ -0.09
TNFRSF1A-209ENST00000536717 LRRC75BQ2VPJ9 315 aa14.47□□□□□ -0.09
TNFRSF1A-209ENST00000536717 ATAD3CQ5T2N8 411 aa14.47□□□□□ -0.09
TNFRSF1A-209ENST00000536717 ZNF626Q68DY1 528 aa14.47□□□□□ -0.09
TNFRSF1A-209ENST00000536717 DYNAPQ8N1N2 210 aa14.47□□□□□ -0.09
TNFRSF1A-209ENST00000536717 OR11H6Q8NGC7 330 aa14.47□□□□□ -0.09
TNFRSF1A-209ENST00000536717 LGALS14Q8TCE9 139 aa14.47□□□□□ -0.09
TNFRSF1A-209ENST00000536717 PTX4Q96A99 478 aa14.47□□□□□ -0.09
TNFRSF1A-209ENST00000536717 KCTD12Q96CX2 325 aaKnown RBP14.47□□□□□ -0.09
TNFRSF1A-209ENST00000536717 TM2D1Q9BX74 207 aa14.47□□□□□ -0.09
TNFRSF1A-209ENST00000536717 RNF114Q9Y508 228 aa14.47□□□□□ -0.09
TNFRSF1A-209ENST00000536717 ETV7Q9Y603 341 aa14.47□□□□□ -0.09
TNFRSF1A-209ENST00000536717 ARG1P05089 322 aa14.46□□□□□ -0.09
TNFRSF1A-209ENST00000536717 SOX6P35712 828 aa14.46□□□□□ -0.09
TNFRSF1A-209ENST00000536717 AANATQ16613 207 aa14.46□□□□□ -0.09
TNFRSF1A-209ENST00000536717 PAN3Q58A45 887 aaKnown RBP14.46□□□□□ -0.09
TNFRSF1A-209ENST00000536717 PRR31Q5SQ13 230 aa14.46□□□□□ -0.09
TNFRSF1A-209ENST00000536717 OR13D1Q8NGV5 346 aa14.46□□□□□ -0.09
TNFRSF1A-209ENST00000536717 PIFOQ8TCI5 191 aa14.46□□□□□ -0.09
TNFRSF1A-209ENST00000536717 AP3S1Q92572 193 aa14.46□□□□□ -0.09
TNFRSF1A-209ENST00000536717 BARHL1Q9BZE3 327 aa14.46□□□□□ -0.09
TNFRSF1A-209ENST00000536717 LPAR5Q9H1C0 372 aa14.46□□□□□ -0.09
TNFRSF1A-209ENST00000536717 PPA2Q9H2U2 334 aa14.46□□□□□ -0.09
TNFRSF1A-209ENST00000536717 TRAV24A0A0B4J272 114 aa14.46□□□□□ -0.1
TNFRSF1A-209ENST00000536717 DPPA5A6NC42 116 aa14.46□□□□□ -0.1
TNFRSF1A-209ENST00000536717 METTL21EPA6NDL7 271 aa14.46□□□□□ -0.1
TNFRSF1A-209ENST00000536717 HSPB6O14558 160 aa14.46□□□□□ -0.1
TNFRSF1A-209ENST00000536717 MMP23AO75900 390 aa14.46□□□□□ -0.1
TNFRSF1A-209ENST00000536717 TSPAN9O75954 239 aa14.46□□□□□ -0.1
TNFRSF1A-209ENST00000536717 CSN2P05814 226 aa14.46□□□□□ -0.1
TNFRSF1A-209ENST00000536717 GLIPR1P48060 266 aa14.46□□□□□ -0.1
TNFRSF1A-209ENST00000536717 PROK1P58294 105 aa14.46□□□□□ -0.1
TNFRSF1A-209ENST00000536717 KRTAP10-3P60369 221 aa14.46□□□□□ -0.1
TNFRSF1A-209ENST00000536717 AESQ08117 197 aa14.46□□□□□ -0.1
TNFRSF1A-209ENST00000536717 LY6EQ16553 131 aa14.46□□□□□ -0.1
TNFRSF1A-209ENST00000536717 SUMF2Q8NBJ7 301 aa14.46□□□□□ -0.1
TNFRSF1A-209ENST00000536717 COQ2Q96H96 371 aa14.46□□□□□ -0.1
TNFRSF1A-209ENST00000536717 NICN1Q9BSH3 213 aa14.46□□□□□ -0.1
TNFRSF1A-209ENST00000536717 C16orf95Q9H693 158 aa14.46□□□□□ -0.1
TNFRSF1A-209ENST00000536717 SPATA2Q9UM82 520 aa14.46□□□□□ -0.1
TNFRSF1A-209ENST00000536717 UBE2J1Q9Y385 318 aaPredicted RBP14.46□□□□□ -0.1
TNFRSF1A-209ENST00000536717 TBL2Q9Y4P3 447 aaKnown RBP14.46□□□□□ -0.1
TNFRSF1A-209ENST00000536717 CLPXO76031 633 aa14.45□□□□□ -0.1
TNFRSF1A-209ENST00000536717 ZNF182P17025 639 aaPredicted RBP14.45□□□□□ -0.1
TNFRSF1A-209ENST00000536717 FUT3P21217 361 aa14.45□□□□□ -0.1
TNFRSF1A-209ENST00000536717 KCNJ3P48549 501 aa14.45□□□□□ -0.1
TNFRSF1A-209ENST00000536717 RAB12Q6IQ22 244 aa14.45□□□□□ -0.1
TNFRSF1A-209ENST00000536717 TRAPPC6BQ86SZ2 158 aa14.45□□□□□ -0.1
TNFRSF1A-209ENST00000536717 FAM89BQ8N5H3 189 aa14.45□□□□□ -0.1
TNFRSF1A-209ENST00000536717 OR56B1Q8NGI3 324 aa14.45□□□□□ -0.1
TNFRSF1A-209ENST00000536717 NEK7Q8TDX7 302 aa14.45□□□□□ -0.1
TNFRSF1A-209ENST00000536717 ACOT12Q8WYK0 555 aa14.45□□□□□ -0.1
TNFRSF1A-209ENST00000536717 NEDD4LQ96PU5 975 aa14.45□□□□□ -0.1
TNFRSF1A-209ENST00000536717 CITED1Q99966 193 aa14.45□□□□□ -0.1
TNFRSF1A-209ENST00000536717 DPCDQ9BVM2 203 aaPredicted RBP14.45□□□□□ -0.1
TNFRSF1A-209ENST00000536717 ZNF581Q9P0T4 197 aa14.45□□□□□ -0.1
TNFRSF1A-209ENST00000536717 RCC2Q9P258 522 aaKnown RBP14.45□□□□□ -0.1
TNFRSF1A-209ENST00000536717 PEX16Q9Y5Y5 336 aa14.45□□□□□ -0.1
TNFRSF1A-209ENST00000536717 SESN1Q9Y6P5 492 aa14.45□□□□□ -0.1
TNFRSF1A-209ENST00000536717 VWFP04275 2813 aa14.44□□□□□ -0.1
TNFRSF1A-209ENST00000536717 IGHV2-26A0A0B4J1V2 119 aa14.44□□□□□ -0.1
TNFRSF1A-209ENST00000536717 FUOMA2VDF0 154 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms