RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 ADAMTSL1Q8N6G6 1762 aa0.8□□□□□ -2.28
BRCA2-205ENST00000533776 NUP153P49790 1475 aaKnown RBP0.8□□□□□ -2.28
BRCA2-205ENST00000533776 DNMT1P26358 1616 aaKnown RBP0.79□□□□□ -2.28
BRCA2-205ENST00000533776 HELZ2Q9BYK8 2649 aaKnown RBP0.79□□□□□ -2.28
BRCA2-205ENST00000533776 KMT2BQ9UMN6 2715 aaPredicted RBP0.79□□□□□ -2.28
BRCA2-205ENST00000533776 PGPA6NDG6 321 aa0.79□□□□□ -2.28
BRCA2-205ENST00000533776 LY6LH3BQJ8 138 aa0.79□□□□□ -2.28
BRCA2-205ENST00000533776 J3QLI3 93 aa0.79□□□□□ -2.28
BRCA2-205ENST00000533776 M0QX08 132 aa0.79□□□□□ -2.28
BRCA2-205ENST00000533776 SCN2BO60939 215 aa0.79□□□□□ -2.28
BRCA2-205ENST00000533776 GYPCP04921 128 aa0.79□□□□□ -2.28
BRCA2-205ENST00000533776 ARL14EPLP0DKL9 152 aa0.79□□□□□ -2.28
BRCA2-205ENST00000533776 PSKH1P11801 424 aa0.79□□□□□ -2.28
BRCA2-205ENST00000533776 NQO2P16083 231 aa0.79□□□□□ -2.28
BRCA2-205ENST00000533776 ELK4P28324 431 aa0.79□□□□□ -2.28
BRCA2-205ENST00000533776 BLVRBP30043 206 aaPredicted RBP0.79□□□□□ -2.28
BRCA2-205ENST00000533776 EVI2BP34910 448 aa0.79□□□□□ -2.28
BRCA2-205ENST00000533776 DEKP35659 375 aaKnown RBP0.79□□□□□ -2.28
BRCA2-205ENST00000533776 STX4Q12846 297 aa0.79□□□□□ -2.28
BRCA2-205ENST00000533776 HES1Q14469 280 aa0.79□□□□□ -2.28
BRCA2-205ENST00000533776 SPIN4Q56A73 249 aa0.79□□□□□ -2.28
BRCA2-205ENST00000533776 ACSBG2Q5FVE4 666 aa0.79□□□□□ -2.28
BRCA2-205ENST00000533776 OR10J3Q5JRS4 329 aa0.79□□□□□ -2.28
BRCA2-205ENST00000533776 AHSA2Q719I0 299 aa0.79□□□□□ -2.28
BRCA2-205ENST00000533776 C10orf107Q8IVU9 208 aa0.79□□□□□ -2.28
BRCA2-205ENST00000533776 SELENOHQ8IZQ5 122 aaKnown RBP0.79□□□□□ -2.28
BRCA2-205ENST00000533776 SPERTQ8NA61 448 aa0.79□□□□□ -2.28
BRCA2-205ENST00000533776 FER1L6-AS1Q8NA97 138 aa0.79□□□□□ -2.28
BRCA2-205ENST00000533776 OR4K17Q8NGC6 315 aa0.79□□□□□ -2.28
BRCA2-205ENST00000533776 LRRC20Q8TCA0 184 aa0.79□□□□□ -2.28
BRCA2-205ENST00000533776 DOK4Q8TEW6 326 aa0.79□□□□□ -2.28
BRCA2-205ENST00000533776 CMBLQ96DG6 245 aa0.79□□□□□ -2.28
BRCA2-205ENST00000533776 PRSS27Q9BQR3 290 aa0.79□□□□□ -2.28
BRCA2-205ENST00000533776 OR52A5Q9H2C5 316 aa0.79□□□□□ -2.28
BRCA2-205ENST00000533776 TMBIM4Q9HC24 238 aa0.79□□□□□ -2.28
BRCA2-205ENST00000533776 VPREB3Q9UKI3 123 aa0.79□□□□□ -2.28
BRCA2-205ENST00000533776 SCML1Q9UN30 329 aa0.79□□□□□ -2.28
BRCA2-205ENST00000533776 BTRCQ9Y297 605 aa0.79□□□□□ -2.28
BRCA2-205ENST00000533776 STK38LQ9Y2H1 464 aa0.79□□□□□ -2.28
BRCA2-205ENST00000533776 LINC00588Q9Y4M8 146 aa0.79□□□□□ -2.28
BRCA2-205ENST00000533776 TBL2Q9Y4P3 447 aaKnown RBP0.79□□□□□ -2.28
BRCA2-205ENST00000533776 PHLDA3Q9Y5J5 127 aa0.79□□□□□ -2.28
BRCA2-205ENST00000533776 OR51B4Q9Y5P0 310 aa0.79□□□□□ -2.28
BRCA2-205ENST00000533776 USH1CQ9Y6N9 552 aa0.79□□□□□ -2.28
BRCA2-205ENST00000533776 POLR3AO14802 1390 aaPredicted RBP0.79□□□□□ -2.28
BRCA2-205ENST00000533776 KIAA0232Q92628 1395 aa0.79□□□□□ -2.28
BRCA2-205ENST00000533776 RAB3GAP2Q9H2M9 1393 aa0.79□□□□□ -2.28
BRCA2-205ENST00000533776 PTPRKQ15262 1439 aa0.79□□□□□ -2.28
BRCA2-205ENST00000533776 COL18A1P39060 1754 aa0.78□□□□□ -2.28
BRCA2-205ENST00000533776 TRAV8-3A0A0A6YYJ7 113 aa0.78□□□□□ -2.28
BRCA2-205ENST00000533776 IGHV2-26A0A0B4J1V2 119 aa0.78□□□□□ -2.28
BRCA2-205ENST00000533776 IGKV1-12A0A0C4DH73 117 aa0.78□□□□□ -2.28
BRCA2-205ENST00000533776 GOLGA8QA0A0J9YX86 632 aa0.78□□□□□ -2.28
BRCA2-205ENST00000533776 RAB19A4D1S5 217 aa0.78□□□□□ -2.28
BRCA2-205ENST00000533776 ERICH4A6NGS2 130 aa0.78□□□□□ -2.28
BRCA2-205ENST00000533776 ZNF860A6NHJ4 632 aa0.78□□□□□ -2.28
BRCA2-205ENST00000533776 MKRN2OSH3BPM6 223 aa0.78□□□□□ -2.28
BRCA2-205ENST00000533776 K7ERQ8 282 aa0.78□□□□□ -2.28
BRCA2-205ENST00000533776 YKT6O15498 198 aa0.78□□□□□ -2.28
BRCA2-205ENST00000533776 ZNF189O75820 626 aaPredicted RBP0.78□□□□□ -2.28
BRCA2-205ENST00000533776 FADS2O95864 444 aaKnown RBP0.78□□□□□ -2.28
BRCA2-205ENST00000533776 IGKV1D-12P01611 117 aa0.78□□□□□ -2.28
BRCA2-205ENST00000533776 APOA1P02647 267 aa0.78□□□□□ -2.28
BRCA2-205ENST00000533776 TPM1P09493 284 aa0.78□□□□□ -2.28
BRCA2-205ENST00000533776 CRABP1P29762 137 aa0.78□□□□□ -2.28
BRCA2-205ENST00000533776 TTPAP49638 278 aa0.78□□□□□ -2.28
BRCA2-205ENST00000533776 PRDX1Q06830 199 aaKnown RBP0.78□□□□□ -2.28
BRCA2-205ENST00000533776 PRDX4Q13162 271 aa0.78□□□□□ -2.28
BRCA2-205ENST00000533776 APOFQ13790 326 aa0.78□□□□□ -2.28
BRCA2-205ENST00000533776 WDR43Q15061 677 aaKnown RBP eCLIP0.78□□□□□ -2.28
BRCA2-205ENST00000533776 TRAM1Q15629 374 aa0.78□□□□□ -2.28
BRCA2-205ENST00000533776 GOLGA7BQ2TAP0 167 aa0.78□□□□□ -2.28
BRCA2-205ENST00000533776 BSXQ3C1V8 233 aa0.78□□□□□ -2.28
BRCA2-205ENST00000533776 ZCWPW2Q504Y3 356 aa0.78□□□□□ -2.28
BRCA2-205ENST00000533776 TIMM23BQ5SRD1 257 aa0.78□□□□□ -2.28
BRCA2-205ENST00000533776 FAM162BQ5T6X4 162 aa0.78□□□□□ -2.28
BRCA2-205ENST00000533776 FAM183BPQ6ZVS7 135 aa0.78□□□□□ -2.28
BRCA2-205ENST00000533776 ZNF767PQ75MW2 155 aa0.78□□□□□ -2.28
BRCA2-205ENST00000533776 SLC25A45Q8N413 288 aa0.78□□□□□ -2.28
BRCA2-205ENST00000533776 DDIT4LQ96D03 193 aa0.78□□□□□ -2.28
BRCA2-205ENST00000533776 REEP6Q96HR9 211 aa0.78□□□□□ -2.28
BRCA2-205ENST00000533776 FAM210AQ96ND0 272 aa0.78□□□□□ -2.28
BRCA2-205ENST00000533776 SERPINB11Q96P15 392 aa0.78□□□□□ -2.28
BRCA2-205ENST00000533776 COPS4Q9BT78 406 aa0.78□□□□□ -2.28
BRCA2-205ENST00000533776 ALX4Q9H161 411 aaPredicted RBP0.78□□□□□ -2.28
BRCA2-205ENST00000533776 VCX3AQ9NNX9 186 aa0.78□□□□□ -2.28
BRCA2-205ENST00000533776 TREM1Q9NP99 234 aa0.78□□□□□ -2.28
BRCA2-205ENST00000533776 MS4A12Q9NXJ0 267 aa0.78□□□□□ -2.28
BRCA2-205ENST00000533776 TAS2R13Q9NYV9 303 aa0.78□□□□□ -2.28
BRCA2-205ENST00000533776 RPUSD1Q9UJJ7 312 aaKnown RBP0.78□□□□□ -2.28
BRCA2-205ENST00000533776 ATAD5Q96QE3 1844 aa0.78□□□□□ -2.29
BRCA2-205ENST00000533776 C19orf71A6NCJ1 209 aa0.77□□□□□ -2.29
BRCA2-205ENST00000533776 ARGFXA6NJG6 315 aa0.77□□□□□ -2.29
BRCA2-205ENST00000533776 FAM183AA6NL82 134 aa0.77□□□□□ -2.29
BRCA2-205ENST00000533776 KNCNA6PVL3 124 aa0.77□□□□□ -2.29
BRCA2-205ENST00000533776 ODF3BA8MYP8 253 aa0.77□□□□□ -2.29
BRCA2-205ENST00000533776 FNDC10F2Z333 226 aa0.77□□□□□ -2.29
BRCA2-205ENST00000533776 H3BRN7 92 aa0.77□□□□□ -2.29
BRCA2-205ENST00000533776 SLC25A20O43772 301 aa0.77□□□□□ -2.29
BRCA2-205ENST00000533776 NEMFO60524 1076 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms