RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 PSMD7P51665 324 aa16.53■□□□□ 0.24
CCS-208ENST00000533244 UTF1Q5T230 341 aa16.53■□□□□ 0.24
CCS-208ENST00000533244 SYT6Q5T7P8 510 aaPredicted RBP16.53■□□□□ 0.24
CCS-208ENST00000533244 OR2W3Q7Z3T1 314 aa16.53■□□□□ 0.24
CCS-208ENST00000533244 NEK7Q8TDX7 302 aa16.53■□□□□ 0.24
CCS-208ENST00000533244 CYYR1Q96J86 154 aa16.53■□□□□ 0.24
CCS-208ENST00000533244 PLGRKTQ9HBL7 147 aa16.53■□□□□ 0.24
CCS-208ENST00000533244 IDI2-AS1Q9NZ38 188 aa16.53■□□□□ 0.24
CCS-208ENST00000533244 FBLN5Q9UBX5 448 aa16.53■□□□□ 0.24
CCS-208ENST00000533244 V9GY05 133 aa16.53■□□□□ 0.24
CCS-208ENST00000533244 C15orf65H3BRN8 121 aa16.53■□□□□ 0.24
CCS-208ENST00000533244 CHATP28329 748 aa16.53■□□□□ 0.24
CCS-208ENST00000533244 FGF9P31371 208 aaPredicted RBP16.53■□□□□ 0.24
CCS-208ENST00000533244 RAB11BQ15907 218 aa16.53■□□□□ 0.24
CCS-208ENST00000533244 ZNF596Q8TC21 504 aa16.53■□□□□ 0.24
CCS-208ENST00000533244 ETAA1Q9NY74 926 aa16.53■□□□□ 0.24
CCS-208ENST00000533244 MMP24Q9Y5R2 645 aa16.53■□□□□ 0.24
CCS-208ENST00000533244 FAM172BPA6NC97 362 aa16.52■□□□□ 0.23
CCS-208ENST00000533244 AIPO00170 330 aa16.52■□□□□ 0.23
CCS-208ENST00000533244 ORC5O43913 435 aa16.52■□□□□ 0.23
CCS-208ENST00000533244 CRYBA1P05813 215 aa16.52■□□□□ 0.23
CCS-208ENST00000533244 ARSBP15848 533 aa16.52■□□□□ 0.23
CCS-208ENST00000533244 HTR1DP28221 377 aa16.52■□□□□ 0.23
CCS-208ENST00000533244 DYNLT3P51808 116 aa16.52■□□□□ 0.23
CCS-208ENST00000533244 P2RY14Q15391 338 aa16.52■□□□□ 0.23
CCS-208ENST00000533244 SSX2Q16385 188 aa16.52■□□□□ 0.23
CCS-208ENST00000533244 C22orf42Q6IC83 251 aa16.52■□□□□ 0.23
CCS-208ENST00000533244 NICN1Q9BSH3 213 aa16.52■□□□□ 0.23
CCS-208ENST00000533244 LPAR5Q9H1C0 372 aa16.52■□□□□ 0.23
CCS-208ENST00000533244 STUB1Q9UNE7 303 aa16.52■□□□□ 0.23
CCS-208ENST00000533244 A0A0A6YYD4 124 aa16.51■□□□□ 0.23
CCS-208ENST00000533244 PDCD5O14737 125 aa16.51■□□□□ 0.23
CCS-208ENST00000533244 LDLRAD4O15165 306 aa16.51■□□□□ 0.23
CCS-208ENST00000533244 MYL9P24844 172 aa16.51■□□□□ 0.23
CCS-208ENST00000533244 RAG2P55895 527 aa16.51■□□□□ 0.23
CCS-208ENST00000533244 HLA-DRB5Q30154 266 aa16.51■□□□□ 0.23
CCS-208ENST00000533244 SLC16A12Q6ZSM3 486 aa16.51■□□□□ 0.23
CCS-208ENST00000533244 FAM89BQ8N5H3 189 aa16.51■□□□□ 0.23
CCS-208ENST00000533244 OR9G1Q8NH87 305 aa16.51■□□□□ 0.23
CCS-208ENST00000533244 RFESDQ8TAC1 157 aa16.51■□□□□ 0.23
CCS-208ENST00000533244 TXNL4BQ9NX01 149 aaKnown RBP16.51■□□□□ 0.23
CCS-208ENST00000533244 DPM3Q9P2X0 92 aa16.51■□□□□ 0.23
CCS-208ENST00000533244 FOXI3A8MTJ6 420 aaPredicted RBP16.5■□□□□ 0.23
CCS-208ENST00000533244 MDKP21741 143 aaPredicted RBP16.5■□□□□ 0.23
CCS-208ENST00000533244 NFYBP25208 207 aa16.5■□□□□ 0.23
CCS-208ENST00000533244 RANBP1P43487 201 aa16.5■□□□□ 0.23
CCS-208ENST00000533244 OR10A3P58181 314 aa16.5■□□□□ 0.23
CCS-208ENST00000533244 OR51D1Q8NGF3 324 aa16.5■□□□□ 0.23
CCS-208ENST00000533244 OR52M1Q8NGK5 317 aa16.5■□□□□ 0.23
CCS-208ENST00000533244 OR4F5Q8NH21 305 aa16.5■□□□□ 0.23
CCS-208ENST00000533244 NDNFQ8TB73 568 aa16.5■□□□□ 0.23
CCS-208ENST00000533244 CCDC107Q8WV48 283 aa16.5■□□□□ 0.23
CCS-208ENST00000533244 FAM3DQ96BQ1 224 aa16.5■□□□□ 0.23
CCS-208ENST00000533244 SULT4A1Q9BR01 284 aa16.5■□□□□ 0.23
CCS-208ENST00000533244 MBNL3Q9NUK0 354 aaKnown RBP16.5■□□□□ 0.23
CCS-208ENST00000533244 STEAP1Q9UHE8 339 aa16.5■□□□□ 0.23
CCS-208ENST00000533244 A0A1B0GUS0 222 aa16.49■□□□□ 0.23
CCS-208ENST00000533244 UBE2QL1A1L167 161 aa16.49■□□□□ 0.23
CCS-208ENST00000533244 LY6LH3BQJ8 138 aa16.49■□□□□ 0.23
CCS-208ENST00000533244 BUB1B-PAK6H3BSN5 160 aa16.49■□□□□ 0.23
CCS-208ENST00000533244 TNFAIP8O95379 198 aa16.49■□□□□ 0.23
CCS-208ENST00000533244 CLDN12P56749 244 aa16.49■□□□□ 0.23
CCS-208ENST00000533244 NEDD8Q15843 81 aa16.49■□□□□ 0.23
CCS-208ENST00000533244 FAM189A2Q15884 450 aa16.49■□□□□ 0.23
CCS-208ENST00000533244 LIAT1Q6ZQX7 453 aa16.49■□□□□ 0.23
CCS-208ENST00000533244 NR2C2APQ86WQ0 139 aa16.49■□□□□ 0.23
CCS-208ENST00000533244 OR4K15Q8NH41 348 aa16.49■□□□□ 0.23
CCS-208ENST00000533244 ARL11Q969Q4 196 aa16.49■□□□□ 0.23
CCS-208ENST00000533244 NEDD4LQ96PU5 975 aa16.49■□□□□ 0.23
CCS-208ENST00000533244 HILPDAQ9Y5L2 63 aa16.49■□□□□ 0.23
CCS-208ENST00000533244 IFITM5A6NNB3 132 aa16.48■□□□□ 0.23
CCS-208ENST00000533244 POM121CA8CG34 1229 aa16.48■□□□□ 0.23
CCS-208ENST00000533244 C12orf77C9JDV5 145 aa16.48■□□□□ 0.23
CCS-208ENST00000533244 J3QR06 171 aa16.48■□□□□ 0.23
CCS-208ENST00000533244 F2RL2O00254 374 aa16.48■□□□□ 0.23
CCS-208ENST00000533244 TOR1AO14656 332 aa16.48■□□□□ 0.23
CCS-208ENST00000533244 RAB3BP20337 219 aa16.48■□□□□ 0.23
CCS-208ENST00000533244 PRRX1P54821 245 aa16.48■□□□□ 0.23
CCS-208ENST00000533244 LOXL3P58215 753 aa16.48■□□□□ 0.23
CCS-208ENST00000533244 LY6EQ16553 131 aa16.48■□□□□ 0.23
CCS-208ENST00000533244 PLA1AQ53H76 456 aa16.48■□□□□ 0.23
CCS-208ENST00000533244 NKAPLQ5M9Q1 402 aa16.48■□□□□ 0.23
CCS-208ENST00000533244 C6orf183Q5T699 404 aa16.48■□□□□ 0.23
CCS-208ENST00000533244 HES5Q5TA89 166 aa16.48■□□□□ 0.23
CCS-208ENST00000533244 DHRS7BQ6IAN0 325 aaPredicted RBP16.48■□□□□ 0.23
CCS-208ENST00000533244 TRAT1Q6PIZ9 186 aa16.48■□□□□ 0.23
CCS-208ENST00000533244 Q6ZSV7 163 aa16.48■□□□□ 0.23
CCS-208ENST00000533244 C6orf201Q7Z4U5 140 aa16.48■□□□□ 0.23
CCS-208ENST00000533244 C3orf56Q8N813 242 aa16.48■□□□□ 0.23
CCS-208ENST00000533244 MRPL30Q8TCC3 161 aaKnown RBP16.48■□□□□ 0.23
CCS-208ENST00000533244 CREB3L1Q96BA8 519 aa16.48■□□□□ 0.23
CCS-208ENST00000533244 URM1Q9BTM9 101 aaKnown RBP16.48■□□□□ 0.23
CCS-208ENST00000533244 ZNF747Q9BV97 191 aa16.48■□□□□ 0.23
CCS-208ENST00000533244 MMP28Q9H239 520 aa16.48■□□□□ 0.23
CCS-208ENST00000533244 TRAPPC2LQ9UL33 140 aa16.48■□□□□ 0.23
CCS-208ENST00000533244 PSG11Q9UQ72 335 aa16.48■□□□□ 0.23
CCS-208ENST00000533244 TCF19Q9Y242 345 aa16.48■□□□□ 0.23
CCS-208ENST00000533244 LEUTXA8MZ59 168 aa16.47■□□□□ 0.23
CCS-208ENST00000533244 TSPAN9O75954 239 aa16.47■□□□□ 0.23
CCS-208ENST00000533244 JUNBP17275 347 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms