RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 CLVS1Q8IUQ0 354 aaPredicted RBP3.71□□□□□ -1.82
USP48-211ENST00000526044 GBGT1Q8N5D6 347 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 OR2Z1Q8NG97 314 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 OR5A2Q8NGI9 324 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 OR13C5Q8NGS8 318 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 OR8S1Q8NH09 359 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 PP6455Q8WZ26 134 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 RGP1Q92546 391 aaPredicted RBP3.71□□□□□ -1.82
USP48-211ENST00000526044 TMEM106AQ96A25 262 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 ADAT3Q96EY9 351 aaPredicted RBP3.71□□□□□ -1.82
USP48-211ENST00000526044 RNF170Q96K19 258 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 TECTBQ96PL2 329 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 DUX3Q96PT4 197 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 DERL3Q96Q80 235 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 MICU1Q9BPX6 476 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 SLC30A2Q9BRI3 323 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 FUNDC2Q9BWH2 189 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 PAPOLGQ9BWT3 736 aaKnown RBP3.71□□□□□ -1.82
USP48-211ENST00000526044 FAM192AQ9GZU8 254 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 PLEKHF2Q9H8W4 249 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 ABCB9Q9NP78 766 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 RAB9BQ9NP90 201 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 DYNLRB1Q9NP97 96 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 CBLN4Q9NTU7 201 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 TXNL4BQ9NX01 149 aaKnown RBP3.71□□□□□ -1.82
USP48-211ENST00000526044 RCC2Q9P258 522 aaKnown RBP3.71□□□□□ -1.82
USP48-211ENST00000526044 CKLFQ9UBR5 152 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 UBQLN2Q9UHD9 624 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 FOXJ3Q9UPW0 622 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 SLC7A11Q9UPY5 501 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 NOP16Q9Y3C1 178 aaKnown RBP3.71□□□□□ -1.82
USP48-211ENST00000526044 MAB21L2Q9Y586 359 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 EPG5Q9HCE0 2579 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 SPTA1P02549 2419 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 RP1L1Q8IWN7 2480 aaPredicted RBP3.7□□□□□ -1.82
USP48-211ENST00000526044 FAM208BQ5VWN6 2430 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 TRAV1-2A0A0B4J238 106 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 A0A1W2PPR1 153 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 CCDC160A6NGH7 325 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 OR5B21A6NL26 309 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 ZNF732B4DXR9 585 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 H0YL77 283 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 J3QR06 171 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 M0R233 179 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 NDUFS8O00217 210 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 PDCD5O14737 125 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 PIN1P1O15428 100 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 SULT1B1O43704 296 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 SSX5O60225 188 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 SC5DO75845 299 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 CD8AP01732 235 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 MAS1P04201 325 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 ALDOBP05062 364 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 HCKP08631 526 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 UCHL1P09936 223 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 DANCRP0C864 163 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 IGFBP3P17936 291 aaPredicted RBP3.7□□□□□ -1.82
USP48-211ENST00000526044 PRKACBP22694 351 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 MYL9P24844 172 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 ALDH3B1P43353 468 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 SRP9P49458 86 aaKnown RBP3.7□□□□□ -1.82
USP48-211ENST00000526044 RBP2P50120 134 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 MMP15P51511 669 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 CNN1P51911 297 aaKnown RBP3.7□□□□□ -1.82
USP48-211ENST00000526044 ATP1B3P54709 279 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 TMBIM6P55061 237 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 MTCP1P56278 107 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 LINC01547P58512 204 aaPredicted RBP3.7□□□□□ -1.82
USP48-211ENST00000526044 CD81P60033 236 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 LSM3P62310 102 aaKnown RBP3.7□□□□□ -1.82
USP48-211ENST00000526044 SNRPD2P62316 118 aaKnown RBP3.7□□□□□ -1.82
USP48-211ENST00000526044 PPP3R1P63098 170 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 GNG3P63215 75 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 UBE2V2Q15819 145 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 DMRTC1Q5HYR2 192 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 TMEM255AQ5JRV8 349 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 FAM27D1Q5T7N8 215 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 PLCXD3Q63HM9 321 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 NCR3LG1Q68D85 454 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 TMEM42Q69YG0 159 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 Q6ZR03 302 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 UTS2BQ765I0 119 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 ERASQ7Z444 233 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 TPRA1Q86W33 373 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 SLC7A5P1Q8MH63 180 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 ZCCHC24Q8N2G6 241 aaKnown RBP3.7□□□□□ -1.82
USP48-211ENST00000526044 OR1M1Q8NGA1 313 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 OR56B1Q8NGI3 324 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 OR5P3Q8WZ94 311 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 RPL3LQ92901 407 aaKnown RBP3.7□□□□□ -1.82
USP48-211ENST00000526044 DGCR14Q96DF8 476 aaKnown RBP3.7□□□□□ -1.82
USP48-211ENST00000526044 BORCS8Q96FH0 119 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 KCTD7Q96MP8 289 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 GFI1Q99684 422 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 RTL8AQ9BWD3 113 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 CHST5Q9GZS9 411 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 RAB1BQ9H0U4 201 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 CXXC4Q9H2H0 198 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 TMEM138Q9NPI0 162 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 BATF3Q9NR55 127 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms