RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 IMPAD1Q9NX62 359 aa20.25■□□□□ 0.83
PVT1-219ENST00000523427 SIRT4Q9Y6E7 314 aaPredicted RBP20.25■□□□□ 0.83
PVT1-219ENST00000523427 DYNC2H1Q8NCM8 4307 aaKnown RBP20.24■□□□□ 0.83
PVT1-219ENST00000523427 SDCBPO00560 298 aaPredicted RBP20.24■□□□□ 0.83
PVT1-219ENST00000523427 ELP2Q6IA86 826 aa20.24■□□□□ 0.83
PVT1-219ENST00000523427 SUMF2Q8NBJ7 301 aa20.24■□□□□ 0.83
PVT1-219ENST00000523427 TSEN15Q8WW01 171 aaKnown RBP20.24■□□□□ 0.83
PVT1-219ENST00000523427 SLC7A6OSQ96CW6 309 aaPredicted RBP20.24■□□□□ 0.83
PVT1-219ENST00000523427 GABARAPL3Q9BY60 117 aa20.24■□□□□ 0.83
PVT1-219ENST00000523427 PLSCR3Q9NRY6 295 aa20.24■□□□□ 0.83
PVT1-219ENST00000523427 GABRPO00591 440 aa20.23■□□□□ 0.83
PVT1-219ENST00000523427 MOSP00540 346 aa20.23■□□□□ 0.83
PVT1-219ENST00000523427 IL13RA2Q14627 380 aa20.23■□□□□ 0.83
PVT1-219ENST00000523427 RNF152Q8N8N0 203 aa20.23■□□□□ 0.83
PVT1-219ENST00000523427 PXT1Q8NFP0 134 aa20.23■□□□□ 0.83
PVT1-219ENST00000523427 KCTD7Q96MP8 289 aa20.23■□□□□ 0.83
PVT1-219ENST00000523427 DHDHQ9UQ10 334 aa20.23■□□□□ 0.83
PVT1-219ENST00000523427 AP4S1Q9Y587 144 aa20.23■□□□□ 0.83
PVT1-219ENST00000523427 RYR2Q92736 4967 aa20.22■□□□□ 0.83
PVT1-219ENST00000523427 J3QRE1 110 aa20.22■□□□□ 0.83
PVT1-219ENST00000523427 MAGEB3O15480 346 aa20.22■□□□□ 0.83
PVT1-219ENST00000523427 IGHG4P01861 327 aa20.22■□□□□ 0.83
PVT1-219ENST00000523427 SOX6P35712 828 aa20.22■□□□□ 0.83
PVT1-219ENST00000523427 F2RL1P55085 397 aa20.22■□□□□ 0.83
PVT1-219ENST00000523427 LHFPL3Q86UP9 236 aa20.22■□□□□ 0.83
PVT1-219ENST00000523427 ACBD7Q8N6N7 88 aa20.22■□□□□ 0.83
PVT1-219ENST00000523427 OR51A2Q8NGJ7 313 aa20.22■□□□□ 0.83
PVT1-219ENST00000523427 RTN4IP1Q8WWV3 396 aaPredicted RBP20.22■□□□□ 0.83
PVT1-219ENST00000523427 PALMDQ9NP74 551 aa20.22■□□□□ 0.83
PVT1-219ENST00000523427 HUWE1Q7Z6Z7 4374 aaKnown RBP20.21■□□□□ 0.83
PVT1-219ENST00000523427 SAC3D1A6NKF1 404 aa20.21■□□□□ 0.83
PVT1-219ENST00000523427 OR7C1O76099 320 aaPredicted RBP20.21■□□□□ 0.83
PVT1-219ENST00000523427 CDRT1O95170 752 aa20.21■□□□□ 0.83
PVT1-219ENST00000523427 SLC2A2P11168 524 aaPredicted RBP20.21■□□□□ 0.83
PVT1-219ENST00000523427 RAB3AP20336 220 aa20.21■□□□□ 0.83
PVT1-219ENST00000523427 GZMHP20718 246 aa20.21■□□□□ 0.83
PVT1-219ENST00000523427 IL3RAP26951 378 aa20.21■□□□□ 0.83
PVT1-219ENST00000523427 KCNJ3P48549 501 aa20.21■□□□□ 0.83
PVT1-219ENST00000523427 CFHR3Q02985 330 aa20.21■□□□□ 0.83
PVT1-219ENST00000523427 OR1N2Q8NGR9 330 aa20.21■□□□□ 0.83
PVT1-219ENST00000523427 PDCD1LG2Q9BQ51 273 aa20.21■□□□□ 0.83
PVT1-219ENST00000523427 ISG20L2Q9H9L3 353 aaKnown RBP20.21■□□□□ 0.83
PVT1-219ENST00000523427 GNB4Q9HAV0 340 aa20.21■□□□□ 0.83
PVT1-219ENST00000523427 AASSQ9UDR5 926 aa20.21■□□□□ 0.83
PVT1-219ENST00000523427 ING4Q9UNL4 249 aa20.21■□□□□ 0.83
PVT1-219ENST00000523427 WSB1Q9Y6I7 421 aa20.21■□□□□ 0.83
PVT1-219ENST00000523427 SORL1Q92673 2214 aa20.21■□□□□ 0.83
PVT1-219ENST00000523427 TMEM30CPA0ZSE6 113 aa20.2■□□□□ 0.82
PVT1-219ENST00000523427 LYL1P12980 280 aa20.2■□□□□ 0.82
PVT1-219ENST00000523427 MYF6P23409 242 aa20.2■□□□□ 0.82
PVT1-219ENST00000523427 CD1BP29016 333 aa20.2■□□□□ 0.82
PVT1-219ENST00000523427 SOX2P48431 317 aa20.2■□□□□ 0.82
PVT1-219ENST00000523427 FHL3Q13643 280 aa20.2■□□□□ 0.82
PVT1-219ENST00000523427 PARP16Q8N5Y8 322 aa20.2■□□□□ 0.82
PVT1-219ENST00000523427 TMEM104Q8NE00 496 aa20.2■□□□□ 0.82
PVT1-219ENST00000523427 NEK7Q8TDX7 302 aa20.2■□□□□ 0.82
PVT1-219ENST00000523427 ALG8Q9BVK2 526 aa20.2■□□□□ 0.82
PVT1-219ENST00000523427 KLK15Q9H2R5 256 aa20.2■□□□□ 0.82
PVT1-219ENST00000523427 GFOD1Q9NXC2 390 aa20.2■□□□□ 0.82
PVT1-219ENST00000523427 OAZ3Q9UMX2 235 aa20.2■□□□□ 0.82
PVT1-219ENST00000523427 ST3GAL6Q9Y274 331 aa20.2■□□□□ 0.82
PVT1-219ENST00000523427 SLC31A2O15432 143 aa20.19■□□□□ 0.82
PVT1-219ENST00000523427 PSMB8P28062 276 aa20.19■□□□□ 0.82
PVT1-219ENST00000523427 ATAD3CQ5T2N8 411 aa20.19■□□□□ 0.82
PVT1-219ENST00000523427 FAM27D1Q5T7N8 215 aa20.19■□□□□ 0.82
PVT1-219ENST00000523427 TMEM65Q6PI78 240 aa20.19■□□□□ 0.82
PVT1-219ENST00000523427 OR5AK2Q8NH90 309 aa20.19■□□□□ 0.82
PVT1-219ENST00000523427 CPNE2Q96FN4 548 aaPredicted RBP20.19■□□□□ 0.82
PVT1-219ENST00000523427 E9PI62 339 aa20.18■□□□□ 0.82
PVT1-219ENST00000523427 C15orf65H3BRN8 121 aa20.18■□□□□ 0.82
PVT1-219ENST00000523427 LINC00311Q8N616 119 aa20.18■□□□□ 0.82
PVT1-219ENST00000523427 ST6GALNAC6Q969X2 333 aa20.18■□□□□ 0.82
PVT1-219ENST00000523427 TAS2R4Q9NYW5 299 aa20.18■□□□□ 0.82
PVT1-219ENST00000523427 ZNF107Q9UII5 783 aaPredicted RBP20.18■□□□□ 0.82
PVT1-219ENST00000523427 OR8U8P0C7N1 319 aa20.17■□□□□ 0.82
PVT1-219ENST00000523427 PAX5Q02548 391 aa20.17■□□□□ 0.82
PVT1-219ENST00000523427 ASPHD1Q5U4P2 390 aa20.17■□□□□ 0.82
PVT1-219ENST00000523427 ZFAND6Q6FIF0 208 aa20.17■□□□□ 0.82
PVT1-219ENST00000523427 FAM71E2Q8N5Q1 922 aa20.17■□□□□ 0.82
PVT1-219ENST00000523427 OR10V1Q8NGI7 309 aa20.17■□□□□ 0.82
PVT1-219ENST00000523427 OR52M1Q8NGK5 317 aa20.17■□□□□ 0.82
PVT1-219ENST00000523427 TRUB1Q8WWH5 349 aaKnown RBP20.17■□□□□ 0.82
PVT1-219ENST00000523427 LGALS12Q96DT0 336 aa20.17■□□□□ 0.82
PVT1-219ENST00000523427 MRPL48Q96GC5 212 aaKnown RBP20.17■□□□□ 0.82
PVT1-219ENST00000523427 ISYNA1Q9NPH2 558 aa20.17■□□□□ 0.82
PVT1-219ENST00000523427 TMEM212A6NML5 194 aa20.16■□□□□ 0.82
PVT1-219ENST00000523427 G3V318 75 aa20.16■□□□□ 0.82
PVT1-219ENST00000523427 GEMIN2O14893 280 aaKnown RBP20.16■□□□□ 0.82
PVT1-219ENST00000523427 FCGR1AP12314 374 aa20.16■□□□□ 0.82
PVT1-219ENST00000523427 INSL3P51460 131 aa20.16■□□□□ 0.82
PVT1-219ENST00000523427 GNB1P62873 340 aa20.16■□□□□ 0.82
PVT1-219ENST00000523427 ZNF616Q08AN1 781 aa20.16■□□□□ 0.82
PVT1-219ENST00000523427 ZIK1Q3SY52 487 aaPredicted RBP20.16■□□□□ 0.82
PVT1-219ENST00000523427 OR8H1Q8NGG4 311 aa20.16■□□□□ 0.82
PVT1-219ENST00000523427 OR52N1Q8NH53 320 aa20.16■□□□□ 0.82
PVT1-219ENST00000523427 DCUN1D4Q92564 292 aa20.16■□□□□ 0.82
PVT1-219ENST00000523427 SAP30O75446 220 aa20.15■□□□□ 0.82
PVT1-219ENST00000523427 CSTBP04080 98 aaKnown RBP20.15■□□□□ 0.82
PVT1-219ENST00000523427 RPSAP08865 295 aaKnown RBP20.15■□□□□ 0.82
PVT1-219ENST00000523427 FRMD6-AS1P0C7T7 363 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms