RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 OR6K6Q8NGW6 343 aa5.2□□□□□ -1.58
SDCBP-210ENST00000522843 C4orf36Q96KX1 117 aa5.2□□□□□ -1.58
SDCBP-210ENST00000522843 PGLYRP3Q96LB9 341 aa5.2□□□□□ -1.58
SDCBP-210ENST00000522843 OR8B4Q96RC9 309 aa5.2□□□□□ -1.58
SDCBP-210ENST00000522843 WDR13Q9H1Z4 485 aa5.2□□□□□ -1.58
SDCBP-210ENST00000522843 OR51E2Q9H255 320 aa5.2□□□□□ -1.58
SDCBP-210ENST00000522843 NIPAL2Q9H841 368 aa5.2□□□□□ -1.58
SDCBP-210ENST00000522843 C19orf12Q9NSK7 152 aa5.2□□□□□ -1.58
SDCBP-210ENST00000522843 SNTG1Q9NSN8 517 aa5.2□□□□□ -1.58
SDCBP-210ENST00000522843 MRM2Q9UI43 246 aaKnown RBP5.2□□□□□ -1.58
SDCBP-210ENST00000522843 LAMP5Q9UJQ1 280 aa5.2□□□□□ -1.58
SDCBP-210ENST00000522843 SSR3Q9UNL2 185 aa5.2□□□□□ -1.58
SDCBP-210ENST00000522843 GSTK1Q9Y2Q3 226 aa5.2□□□□□ -1.58
SDCBP-210ENST00000522843 LHFPL6Q9Y693 200 aa5.2□□□□□ -1.58
SDCBP-210ENST00000522843 PKHD1P08F94 4074 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 TRAV1-2A0A0B4J238 106 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 A0A1W2PQ09 198 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 CCDC160A6NGH7 325 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 OR4C45A6NMZ5 311 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 FAM90A22PA8MWA6 464 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 ODF3BA8MYP8 253 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 PRR32B1ATL7 298 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 E9PI62 339 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 J3QLW9 94 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 NOL3O60936 208 aaKnown RBP5.19□□□□□ -1.58
SDCBP-210ENST00000522843 ALDOBP05062 364 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 KRT8P05787 483 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 MRPL3P09001 348 aaKnown RBP5.19□□□□□ -1.58
SDCBP-210ENST00000522843 FRMD6-AS1P0C7T7 363 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 HSMCR30P0CW71 290 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 ZNF19P17023 458 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 OPRL1P41146 370 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 GUCA1AP43080 201 aaPredicted RBP5.19□□□□□ -1.58
SDCBP-210ENST00000522843 CAV3P56539 151 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 RPS11P62280 158 aaKnown RBP eCLIP5.19□□□□□ -1.58
SDCBP-210ENST00000522843 ZNF92Q03936 586 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 ECH1Q13011 328 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 ALKBH1Q13686 389 aaKnown RBP5.19□□□□□ -1.58
SDCBP-210ENST00000522843 SPCS2Q15005 226 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 CDK5R1Q15078 307 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 MEP1BQ16820 701 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 SNAI3Q3KNW1 292 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 YIF1BQ5BJH7 314 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 ZNF66Q6ZN08 573 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 PGAP1Q75T13 922 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 OR2W3Q7Z3T1 314 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 TPRA1Q86W33 373 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 OR4X2Q8NGF9 303 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 OR52H1Q8NGJ2 320 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 OR2AE1Q8NHA4 323 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 ANGPTL6Q8NI99 470 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 THRSPQ92748 146 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 GHSRQ92847 366 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 RPL3LQ92901 407 aaKnown RBP5.19□□□□□ -1.58
SDCBP-210ENST00000522843 SMIM19Q96E16 107 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 TM2D3Q9BRN9 247 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 CENPOQ9BU64 300 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 ABHD6Q9BV23 337 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 MROQ9BYG7 248 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 SLIRPQ9GZT3 109 aaKnown RBP5.19□□□□□ -1.58
SDCBP-210ENST00000522843 SLC22A4Q9H015 551 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 PNRC2Q9NPJ4 139 aaKnown RBP5.19□□□□□ -1.58
SDCBP-210ENST00000522843 TXNL4BQ9NX01 149 aaKnown RBP5.19□□□□□ -1.58
SDCBP-210ENST00000522843 MRPL15Q9P015 296 aaKnown RBP5.19□□□□□ -1.58
SDCBP-210ENST00000522843 CCDC59Q9P031 241 aaKnown RBP5.19□□□□□ -1.58
SDCBP-210ENST00000522843 SLC25A10Q9UBX3 287 aaPredicted RBP5.19□□□□□ -1.58
SDCBP-210ENST00000522843 ZMAT5Q9UDW3 170 aaKnown RBP5.19□□□□□ -1.58
SDCBP-210ENST00000522843 ZNF391Q9UJN7 358 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 KLHDC2Q9Y2U9 406 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 SMAD5-AS1Q9Y6J3 95 aa5.19□□□□□ -1.58
SDCBP-210ENST00000522843 TRBV5-5A0A0J9YX44 114 aa5.18□□□□□ -1.58
SDCBP-210ENST00000522843 TVP23AA6NH52 213 aa5.18□□□□□ -1.58
SDCBP-210ENST00000522843 TMEM212A6NML5 194 aa5.18□□□□□ -1.58
SDCBP-210ENST00000522843 F5H5K5 113 aa5.18□□□□□ -1.58
SDCBP-210ENST00000522843 SIGLEC5O15389 551 aa5.18□□□□□ -1.58
SDCBP-210ENST00000522843 LCATP04180 440 aa5.18□□□□□ -1.58
SDCBP-210ENST00000522843 UCHL1P09936 223 aa5.18□□□□□ -1.58
SDCBP-210ENST00000522843 PSKH1P11801 424 aa5.18□□□□□ -1.58
SDCBP-210ENST00000522843 CCL3L1P16619 93 aa5.18□□□□□ -1.58
SDCBP-210ENST00000522843 ZNF182P17025 639 aaPredicted RBP5.18□□□□□ -1.58
SDCBP-210ENST00000522843 OTX1P32242 354 aaPredicted RBP5.18□□□□□ -1.58
SDCBP-210ENST00000522843 NAA10P41227 235 aaPredicted RBP5.18□□□□□ -1.58
SDCBP-210ENST00000522843 DYNLT3P51808 116 aa5.18□□□□□ -1.58
SDCBP-210ENST00000522843 RIDAP52758 137 aaKnown RBP5.18□□□□□ -1.58
SDCBP-210ENST00000522843 GMFBP60983 142 aa5.18□□□□□ -1.58
SDCBP-210ENST00000522843 VBP1P61758 197 aa5.18□□□□□ -1.58
SDCBP-210ENST00000522843 NCS1P62166 190 aa5.18□□□□□ -1.58
SDCBP-210ENST00000522843 FABP5Q01469 135 aa5.18□□□□□ -1.58
SDCBP-210ENST00000522843 SSX2Q16385 188 aa5.18□□□□□ -1.58
SDCBP-210ENST00000522843 TP53I3Q53FA7 332 aa5.18□□□□□ -1.58
SDCBP-210ENST00000522843 ACSM3Q53FZ2 586 aa5.18□□□□□ -1.58
SDCBP-210ENST00000522843 CFAP77Q6ZQR2 320 aa5.18□□□□□ -1.58
SDCBP-210ENST00000522843 KRT74Q7RTS7 529 aa5.18□□□□□ -1.58
SDCBP-210ENST00000522843 ZNF329Q86UD4 541 aa5.18□□□□□ -1.58
SDCBP-210ENST00000522843 CATSPERDQ86XM0 798 aa5.18□□□□□ -1.58
SDCBP-210ENST00000522843 CROCCP3Q8IVE0 287 aa5.18□□□□□ -1.58
SDCBP-210ENST00000522843 FAM185AQ8N0U4 392 aa5.18□□□□□ -1.58
SDCBP-210ENST00000522843 CCDC54Q8NEL0 328 aa5.18□□□□□ -1.58
SDCBP-210ENST00000522843 GJC3Q8NFK1 279 aa5.18□□□□□ -1.58
SDCBP-210ENST00000522843 OR1M1Q8NGA1 313 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms