RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 MS4A10Q96PG2 267 aa6.6□□□□□ -1.35
TRAPPC9-212ENST00000521944 ANKRD60Q9BZ19 345 aa6.6□□□□□ -1.35
TRAPPC9-212ENST00000521944 CCDC134Q9H6E4 229 aa6.6□□□□□ -1.35
TRAPPC9-212ENST00000521944 PLEKHA1Q9HB21 404 aa6.6□□□□□ -1.35
TRAPPC9-212ENST00000521944 NDE1Q9NXR1 346 aa6.6□□□□□ -1.35
TRAPPC9-212ENST00000521944 SLC23A1Q9UHI7 598 aa6.6□□□□□ -1.35
TRAPPC9-212ENST00000521944 NUFIP1Q9UHK0 495 aaKnown RBP6.6□□□□□ -1.35
TRAPPC9-212ENST00000521944 APLNQ9ULZ1 77 aa6.6□□□□□ -1.35
TRAPPC9-212ENST00000521944 COPS3Q9UNS2 423 aa6.6□□□□□ -1.35
TRAPPC9-212ENST00000521944 MYRFQ9Y2G1 1151 aa6.6□□□□□ -1.35
TRAPPC9-212ENST00000521944 FAM32AQ9Y421 112 aaKnown RBP6.6□□□□□ -1.35
TRAPPC9-212ENST00000521944 NUBP2Q9Y5Y2 271 aa6.6□□□□□ -1.35
TRAPPC9-212ENST00000521944 TRAV39A0A0B4J263 110 aa6.59□□□□□ -1.35
TRAPPC9-212ENST00000521944 SLC33A1O00400 549 aaPredicted RBP6.59□□□□□ -1.35
TRAPPC9-212ENST00000521944 MRASO14807 208 aa6.59□□□□□ -1.35
TRAPPC9-212ENST00000521944 ARPC1BO15143 372 aaKnown RBP6.59□□□□□ -1.35
TRAPPC9-212ENST00000521944 NPPAP01160 153 aa6.59□□□□□ -1.35
TRAPPC9-212ENST00000521944 IL1AP01583 271 aa6.59□□□□□ -1.35
TRAPPC9-212ENST00000521944 H2AFXP16104 143 aaPredicted RBP6.59□□□□□ -1.35
TRAPPC9-212ENST00000521944 NCK1P16333 377 aa6.59□□□□□ -1.35
TRAPPC9-212ENST00000521944 PRKACAP17612 351 aa6.59□□□□□ -1.35
TRAPPC9-212ENST00000521944 TRIM25Q14258 630 aaKnown RBP6.59□□□□□ -1.35
TRAPPC9-212ENST00000521944 ATXN7L3Q14CW9 347 aaPredicted RBP6.59□□□□□ -1.35
TRAPPC9-212ENST00000521944 ECSCRQ19T08 205 aa6.59□□□□□ -1.35
TRAPPC9-212ENST00000521944 LRRC36Q1X8D7 754 aa6.59□□□□□ -1.35
TRAPPC9-212ENST00000521944 SPIN3Q5JUX0 258 aa6.59□□□□□ -1.35
TRAPPC9-212ENST00000521944 SLC15A3Q8IY34 581 aa6.59□□□□□ -1.35
TRAPPC9-212ENST00000521944 GNPDA2Q8TDQ7 276 aa6.59□□□□□ -1.35
TRAPPC9-212ENST00000521944 BTBD10Q9BSF8 475 aa6.59□□□□□ -1.35
TRAPPC9-212ENST00000521944 TSSK6Q9BXA6 273 aa6.59□□□□□ -1.35
TRAPPC9-212ENST00000521944 SLC25A19Q9HC21 320 aa6.59□□□□□ -1.35
TRAPPC9-212ENST00000521944 HMG20AQ9NP66 347 aa6.59□□□□□ -1.35
TRAPPC9-212ENST00000521944 FOXA2Q9Y261 457 aaPredicted RBP6.59□□□□□ -1.35
TRAPPC9-212ENST00000521944 GSTK1Q9Y2Q3 226 aa6.59□□□□□ -1.35
TRAPPC9-212ENST00000521944 FUOMA2VDF0 154 aa6.58□□□□□ -1.36
TRAPPC9-212ENST00000521944 SH2D1BO14796 132 aa6.58□□□□□ -1.36
TRAPPC9-212ENST00000521944 SLC31A2O15432 143 aa6.58□□□□□ -1.36
TRAPPC9-212ENST00000521944 NDUFB8O95169 186 aa6.58□□□□□ -1.36
TRAPPC9-212ENST00000521944 GADD45GO95257 159 aa6.58□□□□□ -1.36
TRAPPC9-212ENST00000521944 TRBV12-3P01733 135 aa6.58□□□□□ -1.36
TRAPPC9-212ENST00000521944 SEMG1P04279 462 aa6.58□□□□□ -1.36
TRAPPC9-212ENST00000521944 ZP3P21754 424 aa6.58□□□□□ -1.36
TRAPPC9-212ENST00000521944 SSTR5P35346 364 aa6.58□□□□□ -1.36
TRAPPC9-212ENST00000521944 GLP1RP43220 463 aa6.58□□□□□ -1.36
TRAPPC9-212ENST00000521944 LIPEQ05469 1076 aa6.58□□□□□ -1.36
TRAPPC9-212ENST00000521944 CDK5R1Q15078 307 aa6.58□□□□□ -1.36
TRAPPC9-212ENST00000521944 COQ5Q5HYK3 327 aa6.58□□□□□ -1.36
TRAPPC9-212ENST00000521944 SLC16A12Q6ZSM3 486 aa6.58□□□□□ -1.36
TRAPPC9-212ENST00000521944 LINC00311Q8N616 119 aa6.58□□□□□ -1.36
TRAPPC9-212ENST00000521944 NUDT10Q8NFP7 164 aa6.58□□□□□ -1.36
TRAPPC9-212ENST00000521944 OR51T1Q8NGJ9 327 aa6.58□□□□□ -1.36
TRAPPC9-212ENST00000521944 RNF183Q96D59 192 aa6.58□□□□□ -1.36
TRAPPC9-212ENST00000521944 NUDT11Q96G61 164 aa6.58□□□□□ -1.36
TRAPPC9-212ENST00000521944 CLUHP3Q96NS8 147 aa6.58□□□□□ -1.36
TRAPPC9-212ENST00000521944 GGTLC1Q9BX51 225 aa6.58□□□□□ -1.36
TRAPPC9-212ENST00000521944 COMMD4Q9H0A8 199 aa6.58□□□□□ -1.36
TRAPPC9-212ENST00000521944 RANGRFQ9HD47 186 aaPredicted RBP6.58□□□□□ -1.36
TRAPPC9-212ENST00000521944 EXOSC4Q9NPD3 245 aaKnown RBP6.58□□□□□ -1.36
TRAPPC9-212ENST00000521944 SCRT2Q9NQ03 307 aa6.58□□□□□ -1.36
TRAPPC9-212ENST00000521944 KIF25Q9UIL4 384 aa6.58□□□□□ -1.36
TRAPPC9-212ENST00000521944 IGKV1-9A0A0C4DH69 117 aa6.57□□□□□ -1.36
TRAPPC9-212ENST00000521944 FCN1O00602 326 aa6.57□□□□□ -1.36
TRAPPC9-212ENST00000521944 NME4O00746 187 aa6.57□□□□□ -1.36
TRAPPC9-212ENST00000521944 SPRY2O43597 315 aa6.57□□□□□ -1.36
TRAPPC9-212ENST00000521944 GASTP01350 101 aa6.57□□□□□ -1.36
TRAPPC9-212ENST00000521944 BMI1P35226 326 aa6.57□□□□□ -1.36
TRAPPC9-212ENST00000521944 NUDT2P50583 147 aa6.57□□□□□ -1.36
TRAPPC9-212ENST00000521944 ALDH3A2P51648 485 aa6.57□□□□□ -1.36
TRAPPC9-212ENST00000521944 ZNF134P52741 427 aa6.57□□□□□ -1.36
TRAPPC9-212ENST00000521944 NANOS2P60321 138 aaKnown RBP6.57□□□□□ -1.36
TRAPPC9-212ENST00000521944 SCN1BQ07699 218 aa6.57□□□□□ -1.36
TRAPPC9-212ENST00000521944 BNIP1Q12981 228 aa6.57□□□□□ -1.36
TRAPPC9-212ENST00000521944 MMDQ15546 238 aa6.57□□□□□ -1.36
TRAPPC9-212ENST00000521944 RASSF6Q6ZTQ3 369 aa6.57□□□□□ -1.36
TRAPPC9-212ENST00000521944 LAX1Q8IWV1 398 aa6.57□□□□□ -1.36
TRAPPC9-212ENST00000521944 Q8IYB0 196 aa6.57□□□□□ -1.36
TRAPPC9-212ENST00000521944 ELMOD2Q8IZ81 293 aa6.57□□□□□ -1.36
TRAPPC9-212ENST00000521944 ZNF565Q8N9K5 539 aa6.57□□□□□ -1.36
TRAPPC9-212ENST00000521944 OR9Q2Q8NGE9 314 aa6.57□□□□□ -1.36
TRAPPC9-212ENST00000521944 MRGPRDQ8TDS7 321 aa6.57□□□□□ -1.36
TRAPPC9-212ENST00000521944 STON2Q8WXE9 905 aa6.57□□□□□ -1.36
TRAPPC9-212ENST00000521944 OR51V1Q9H2C8 321 aa6.57□□□□□ -1.36
TRAPPC9-212ENST00000521944 CMC2Q9NRP2 79 aa6.57□□□□□ -1.36
TRAPPC9-212ENST00000521944 INTS9Q9NV88 658 aaKnown RBP6.57□□□□□ -1.36
TRAPPC9-212ENST00000521944 ARMC1Q9NVT9 282 aa6.57□□□□□ -1.36
TRAPPC9-212ENST00000521944 SLC2A8Q9NY64 477 aa6.57□□□□□ -1.36
TRAPPC9-212ENST00000521944 CNOT2Q9NZN8 540 aaKnown RBP6.57□□□□□ -1.36
TRAPPC9-212ENST00000521944 MEIKINA0A087WXM9 373 aa6.56□□□□□ -1.36
TRAPPC9-212ENST00000521944 DHRS7CA6NNS2 312 aa6.56□□□□□ -1.36
TRAPPC9-212ENST00000521944 MAGEB4O15481 346 aaPredicted RBP6.56□□□□□ -1.36
TRAPPC9-212ENST00000521944 EDN2P20800 178 aa6.56□□□□□ -1.36
TRAPPC9-212ENST00000521944 CCL1P22362 96 aa6.56□□□□□ -1.36
TRAPPC9-212ENST00000521944 FUT6P51993 359 aa6.56□□□□□ -1.36
TRAPPC9-212ENST00000521944 ZNF137PP52743 207 aa6.56□□□□□ -1.36
TRAPPC9-212ENST00000521944 TPPP2P59282 170 aa6.56□□□□□ -1.36
TRAPPC9-212ENST00000521944 ACTBP60709 375 aa6.56□□□□□ -1.36
TRAPPC9-212ENST00000521944 CX3CL1P78423 397 aa6.56□□□□□ -1.36
TRAPPC9-212ENST00000521944 ROM1Q03395 351 aa6.56□□□□□ -1.36
TRAPPC9-212ENST00000521944 APOFQ13790 326 aa6.56□□□□□ -1.36
TRAPPC9-212ENST00000521944 RBMY1FQ15415 496 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms