RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 ZNF586Q9NXT0 402 aa2.87□□□□□ -1.95
HMGB1P46-201ENST00000520062 NKIRAS1Q9NYS0 192 aa2.87□□□□□ -1.95
HMGB1P46-201ENST00000520062 ZNF492Q9P255 531 aa2.87□□□□□ -1.95
HMGB1P46-201ENST00000520062 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.87□□□□□ -1.95
HMGB1P46-201ENST00000520062 ICOSQ9Y6W8 199 aa2.87□□□□□ -1.95
HMGB1P46-201ENST00000520062 ARAP3Q8WWN8 1544 aa2.87□□□□□ -1.95
HMGB1P46-201ENST00000520062 TRIP11Q15643 1979 aa2.87□□□□□ -1.95
HMGB1P46-201ENST00000520062 COL1A2P08123 1366 aa2.87□□□□□ -1.95
HMGB1P46-201ENST00000520062 SVILO95425 2214 aa2.87□□□□□ -1.95
HMGB1P46-201ENST00000520062 SCN4AP35499 1836 aa2.86□□□□□ -1.95
HMGB1P46-201ENST00000520062 PTPRKQ15262 1439 aa2.86□□□□□ -1.95
HMGB1P46-201ENST00000520062 VWA8A3KMH1 1905 aa2.86□□□□□ -1.95
HMGB1P46-201ENST00000520062 OR5H14A6NHG9 310 aa2.86□□□□□ -1.95
HMGB1P46-201ENST00000520062 CCRL2O00421 344 aa2.86□□□□□ -1.95
HMGB1P46-201ENST00000520062 HPGDSO60760 199 aa2.86□□□□□ -1.95
HMGB1P46-201ENST00000520062 ADAP1O75689 374 aa2.86□□□□□ -1.95
HMGB1P46-201ENST00000520062 GPR75O95800 540 aa2.86□□□□□ -1.95
HMGB1P46-201ENST00000520062 IGHV3-53P01767 116 aa2.86□□□□□ -1.95
HMGB1P46-201ENST00000520062 TRGV3P03979 118 aa2.86□□□□□ -1.95
HMGB1P46-201ENST00000520062 CGB3P0DN86 165 aa2.86□□□□□ -1.95
HMGB1P46-201ENST00000520062 CGB7P0DN87 165 aa2.86□□□□□ -1.95
HMGB1P46-201ENST00000520062 GABRA1P14867 456 aa2.86□□□□□ -1.95
HMGB1P46-201ENST00000520062 IL15RAQ13261 267 aa2.86□□□□□ -1.95
HMGB1P46-201ENST00000520062 TBC1D28Q2M2D7 210 aa2.86□□□□□ -1.95
HMGB1P46-201ENST00000520062 FAM151BQ6UXP7 276 aa2.86□□□□□ -1.95
HMGB1P46-201ENST00000520062 Q6ZQT7 251 aa2.86□□□□□ -1.95
HMGB1P46-201ENST00000520062 PAGE2Q7Z2X7 111 aa2.86□□□□□ -1.95
HMGB1P46-201ENST00000520062 VN1R4Q7Z5H5 301 aa2.86□□□□□ -1.95
HMGB1P46-201ENST00000520062 KRTCAP2Q8N6L1 136 aa2.86□□□□□ -1.95
HMGB1P46-201ENST00000520062 FER1L6-AS1Q8NA97 138 aa2.86□□□□□ -1.95
HMGB1P46-201ENST00000520062 BPIFB6Q8NFQ5 453 aa2.86□□□□□ -1.95
HMGB1P46-201ENST00000520062 OR5K1Q8NHB7 308 aa2.86□□□□□ -1.95
HMGB1P46-201ENST00000520062 ARL5BQ96KC2 179 aa2.86□□□□□ -1.95
HMGB1P46-201ENST00000520062 B9D2Q9BPU9 175 aa2.86□□□□□ -1.95
HMGB1P46-201ENST00000520062 GABARAPL1Q9H0R8 117 aa2.86□□□□□ -1.95
HMGB1P46-201ENST00000520062 METTL9Q9H1A3 318 aa2.86□□□□□ -1.95
HMGB1P46-201ENST00000520062 TMEM216Q9P0N5 145 aa2.86□□□□□ -1.95
HMGB1P46-201ENST00000520062 MIA3Q5JRA6 1907 aa2.85□□□□□ -1.95
HMGB1P46-201ENST00000520062 IGHV3OR15-7A0A075B7D8 119 aa2.85□□□□□ -1.95
HMGB1P46-201ENST00000520062 A8MWP4 228 aa2.85□□□□□ -1.95
HMGB1P46-201ENST00000520062 ATP8B1O43520 1251 aa2.85□□□□□ -1.95
HMGB1P46-201ENST00000520062 LTAP01374 205 aa2.85□□□□□ -1.95
HMGB1P46-201ENST00000520062 IGKV1D-33P01593 117 aa2.85□□□□□ -1.95
HMGB1P46-201ENST00000520062 IGKV1-33P01594 117 aa2.85□□□□□ -1.95
HMGB1P46-201ENST00000520062 CTSEP14091 401 aa2.85□□□□□ -1.95
HMGB1P46-201ENST00000520062 TGFBR2P37173 567 aa2.85□□□□□ -1.95
HMGB1P46-201ENST00000520062 MGAT3Q09327 533 aa2.85□□□□□ -1.95
HMGB1P46-201ENST00000520062 CENPWQ5EE01 88 aa2.85□□□□□ -1.95
HMGB1P46-201ENST00000520062 HENMT1Q5T8I9 393 aaKnown RBP2.85□□□□□ -1.95
HMGB1P46-201ENST00000520062 OR5D18Q8NGL1 313 aa2.85□□□□□ -1.95
HMGB1P46-201ENST00000520062 KCTD4Q8WVF5 259 aa2.85□□□□□ -1.95
HMGB1P46-201ENST00000520062 TAMM41Q96BW9 452 aa2.85□□□□□ -1.95
HMGB1P46-201ENST00000520062 OR2D2Q9H210 308 aa2.85□□□□□ -1.95
HMGB1P46-201ENST00000520062 TP53TG1Q9Y2A0 90 aa2.85□□□□□ -1.95
HMGB1P46-201ENST00000520062 PLXNB3Q9ULL4 1909 aa2.85□□□□□ -1.95
HMGB1P46-201ENST00000520062 DAPL1A0PJW8 107 aa2.84□□□□□ -1.95
HMGB1P46-201ENST00000520062 GOLGA8KD6RF30 607 aa2.84□□□□□ -1.95
HMGB1P46-201ENST00000520062 GOLGA8MH3BSY2 632 aa2.84□□□□□ -1.95
HMGB1P46-201ENST00000520062 ATP6V1G2O95670 118 aa2.84□□□□□ -1.95
HMGB1P46-201ENST00000520062 AGTR1P30556 359 aa2.84□□□□□ -1.95
HMGB1P46-201ENST00000520062 BCL2A1Q16548 175 aa2.84□□□□□ -1.95
HMGB1P46-201ENST00000520062 DNM1P34Q6PK57 102 aa2.84□□□□□ -1.95
HMGB1P46-201ENST00000520062 LYZL2Q7Z4W2 148 aa2.84□□□□□ -1.95
HMGB1P46-201ENST00000520062 NIT1Q86X76 327 aa2.84□□□□□ -1.95
HMGB1P46-201ENST00000520062 MNS1Q8NEH6 495 aa2.84□□□□□ -1.95
HMGB1P46-201ENST00000520062 OR9I1Q8NGQ6 314 aa2.84□□□□□ -1.95
HMGB1P46-201ENST00000520062 DDI1Q8WTU0 396 aa2.84□□□□□ -1.95
HMGB1P46-201ENST00000520062 GALMQ96C23 342 aa2.84□□□□□ -1.95
HMGB1P46-201ENST00000520062 TRIB3Q96RU7 358 aa2.84□□□□□ -1.95
HMGB1P46-201ENST00000520062 DRC3Q9H069 523 aa2.84□□□□□ -1.95
HMGB1P46-201ENST00000520062 PLEKHJ1Q9NW61 149 aa2.84□□□□□ -1.95
HMGB1P46-201ENST00000520062 MTCH2Q9Y6C9 303 aa2.84□□□□□ -1.95
HMGB1P46-201ENST00000520062 CLUHO75153 1309 aa2.84□□□□□ -1.96
HMGB1P46-201ENST00000520062 ARGFXA6NJG6 315 aa2.83□□□□□ -1.96
HMGB1P46-201ENST00000520062 H3BMM0 161 aa2.83□□□□□ -1.96
HMGB1P46-201ENST00000520062 C15orf65H3BRN8 121 aa2.83□□□□□ -1.96
HMGB1P46-201ENST00000520062 H3BSA7 217 aa2.83□□□□□ -1.96
HMGB1P46-201ENST00000520062 M0QYV0 167 aa2.83□□□□□ -1.96
HMGB1P46-201ENST00000520062 GADD45AP24522 165 aa2.83□□□□□ -1.96
HMGB1P46-201ENST00000520062 S100A2P29034 98 aa2.83□□□□□ -1.96
HMGB1P46-201ENST00000520062 EVI2BP34910 448 aa2.83□□□□□ -1.96
HMGB1P46-201ENST00000520062 KLF3P57682 345 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P46-201ENST00000520062 DYNLL1P63167 89 aaKnown RBP2.83□□□□□ -1.96
HMGB1P46-201ENST00000520062 DNAL1Q4LDG9 190 aa2.83□□□□□ -1.96
HMGB1P46-201ENST00000520062 XKRXQ6PP77 449 aa2.83□□□□□ -1.96
HMGB1P46-201ENST00000520062 ZBTB8OSQ8IWT0 167 aa2.83□□□□□ -1.96
HMGB1P46-201ENST00000520062 TMEM251Q8N6I4 163 aa2.83□□□□□ -1.96
HMGB1P46-201ENST00000520062 SPPL2BQ8TCT7 592 aa2.83□□□□□ -1.96
HMGB1P46-201ENST00000520062 APOBEC3DQ96AK3 386 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P46-201ENST00000520062 UBE2WQ96B02 151 aa2.83□□□□□ -1.96
HMGB1P46-201ENST00000520062 CMTM5Q96DZ9 223 aa2.83□□□□□ -1.96
HMGB1P46-201ENST00000520062 ALX4Q9H161 411 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P46-201ENST00000520062 PARVGQ9HBI0 331 aa2.83□□□□□ -1.96
HMGB1P46-201ENST00000520062 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.82□□□□□ -1.96
HMGB1P46-201ENST00000520062 VGLL3A8MV65 326 aa2.82□□□□□ -1.96
HMGB1P46-201ENST00000520062 C4orf51C9J302 202 aa2.82□□□□□ -1.96
HMGB1P46-201ENST00000520062 D6RAR5 112 aa2.82□□□□□ -1.96
HMGB1P46-201ENST00000520062 ZW10O43264 779 aa2.82□□□□□ -1.96
HMGB1P46-201ENST00000520062 COCHO43405 550 aa2.82□□□□□ -1.96
HMGB1P46-201ENST00000520062 STX10O60499 249 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms