RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 LINC01548A6NM66 108 aa7.1□□□□□ -1.27
NUP54-211ENST00000512151 SC5DO75845 299 aa7.1□□□□□ -1.27
NUP54-211ENST00000512151 DHRS3O75911 302 aa7.1□□□□□ -1.27
NUP54-211ENST00000512151 GLRA1P23415 457 aa7.1□□□□□ -1.27
NUP54-211ENST00000512151 GNALP38405 381 aa7.1□□□□□ -1.27
NUP54-211ENST00000512151 MAP2K3P46734 347 aa7.1□□□□□ -1.27
NUP54-211ENST00000512151 SOX2P48431 317 aa7.1□□□□□ -1.27
NUP54-211ENST00000512151 FABP5Q01469 135 aa7.1□□□□□ -1.27
NUP54-211ENST00000512151 GPR50Q13585 617 aa7.1□□□□□ -1.27
NUP54-211ENST00000512151 FHL3Q13643 280 aa7.1□□□□□ -1.27
NUP54-211ENST00000512151 SRSF7Q16629 238 aaKnown RBP eCLIP7.1□□□□□ -1.27
NUP54-211ENST00000512151 FAM27D1Q5T7N8 215 aa7.1□□□□□ -1.27
NUP54-211ENST00000512151 ASPHD1Q5U4P2 390 aa7.1□□□□□ -1.27
NUP54-211ENST00000512151 COMMD2Q86X83 199 aa7.1□□□□□ -1.27
NUP54-211ENST00000512151 Q8N1Y9 231 aa7.1□□□□□ -1.27
NUP54-211ENST00000512151 MFSD4AQ8N468 514 aa7.1□□□□□ -1.27
NUP54-211ENST00000512151 CHPT1Q8WUD6 406 aa7.1□□□□□ -1.27
NUP54-211ENST00000512151 TMEM203Q969S6 136 aa7.1□□□□□ -1.27
NUP54-211ENST00000512151 SPATA25Q9BR10 227 aa7.1□□□□□ -1.27
NUP54-211ENST00000512151 TMED9Q9BVK6 235 aa7.1□□□□□ -1.27
NUP54-211ENST00000512151 COMMD4Q9H0A8 199 aa7.1□□□□□ -1.27
NUP54-211ENST00000512151 OR51E2Q9H255 320 aa7.1□□□□□ -1.27
NUP54-211ENST00000512151 OPA3Q9H6K4 179 aa7.1□□□□□ -1.27
NUP54-211ENST00000512151 HHLA2Q9UM44 414 aa7.1□□□□□ -1.27
NUP54-211ENST00000512151 PIGLQ9Y2B2 252 aa7.1□□□□□ -1.27
NUP54-211ENST00000512151 TRBV5-7A0A0A0MS05 114 aa7.09□□□□□ -1.27
NUP54-211ENST00000512151 A0A1W2PPH5 198 aa7.09□□□□□ -1.27
NUP54-211ENST00000512151 A0A1W2PPK0 400 aa7.09□□□□□ -1.27
NUP54-211ENST00000512151 RFPL4AA6NLU0 287 aa7.09□□□□□ -1.27
NUP54-211ENST00000512151 ZNF850A8MQ14 1090 aa7.09□□□□□ -1.27
NUP54-211ENST00000512151 RFPL4AL1F8VTS6 287 aa7.09□□□□□ -1.27
NUP54-211ENST00000512151 J3QRK9 145 aa7.09□□□□□ -1.27
NUP54-211ENST00000512151 MTRF1O75570 445 aaKnown RBP7.09□□□□□ -1.27
NUP54-211ENST00000512151 DEDDO75618 318 aa7.09□□□□□ -1.27
NUP54-211ENST00000512151 GPX5O75715 221 aa7.09□□□□□ -1.27
NUP54-211ENST00000512151 CFL1P23528 166 aaKnown RBP7.09□□□□□ -1.27
NUP54-211ENST00000512151 TGFBR1P36897 503 aa7.09□□□□□ -1.27
NUP54-211ENST00000512151 DDOSTP39656 456 aa7.09□□□□□ -1.27
NUP54-211ENST00000512151 RIPPLY1Q0D2K3 151 aa7.09□□□□□ -1.27
NUP54-211ENST00000512151 UBE2V2Q15819 145 aa7.09□□□□□ -1.27
NUP54-211ENST00000512151 HAGHQ16775 308 aa7.09□□□□□ -1.27
NUP54-211ENST00000512151 ACSM3Q53FZ2 586 aa7.09□□□□□ -1.27
NUP54-211ENST00000512151 YIF1BQ5BJH7 314 aa7.09□□□□□ -1.27
NUP54-211ENST00000512151 TMEM42Q69YG0 159 aa7.09□□□□□ -1.27
NUP54-211ENST00000512151 TCF23Q7RTU1 214 aa7.09□□□□□ -1.27
NUP54-211ENST00000512151 CALHM1Q8IU99 346 aa7.09□□□□□ -1.27
NUP54-211ENST00000512151 Q8N3U1 123 aa7.09□□□□□ -1.27
NUP54-211ENST00000512151 OR4P4Q8NGL7 312 aa7.09□□□□□ -1.27
NUP54-211ENST00000512151 OR13C3Q8NGS6 347 aa7.09□□□□□ -1.27
NUP54-211ENST00000512151 MCFD2Q8NI22 146 aa7.09□□□□□ -1.27
NUP54-211ENST00000512151 GPR148Q8TDV2 347 aa7.09□□□□□ -1.27
NUP54-211ENST00000512151 HPSE2Q8WWQ2 592 aa7.09□□□□□ -1.27
NUP54-211ENST00000512151 OR5P3Q8WZ94 311 aa7.09□□□□□ -1.27
NUP54-211ENST00000512151 PIGCQ92535 297 aa7.09□□□□□ -1.27
NUP54-211ENST00000512151 OR14A2Q96R54 314 aa7.09□□□□□ -1.27
NUP54-211ENST00000512151 MICU1Q9BPX6 476 aa7.09□□□□□ -1.27
NUP54-211ENST00000512151 CHCHD6Q9BRQ6 235 aa7.09□□□□□ -1.27
NUP54-211ENST00000512151 CENPOQ9BU64 300 aa7.09□□□□□ -1.27
NUP54-211ENST00000512151 PAPOLGQ9BWT3 736 aaKnown RBP7.09□□□□□ -1.27
NUP54-211ENST00000512151 GPR173Q9NS66 373 aa7.09□□□□□ -1.27
NUP54-211ENST00000512151 NDUFB11Q9NX14 153 aa7.09□□□□□ -1.27
NUP54-211ENST00000512151 DNAH11Q96DT5 4516 aa7.09□□□□□ -1.27
NUP54-211ENST00000512151 VPS13DQ5THJ4 4388 aa7.09□□□□□ -1.27
NUP54-211ENST00000512151 IGHV2-26A0A0B4J1V2 119 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 IGKV1-9A0A0C4DH69 117 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 SHISA3A0PJX4 238 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 DHRS7CA6NNS2 312 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 H3BUI4 141 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 GABRPO00591 440 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 CST4P01036 141 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 OCM2P0CE71 109 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 ZNF728P0DKX0 622 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 IGFBP3P17936 291 aaPredicted RBP7.08□□□□□ -1.28
NUP54-211ENST00000512151 CNTFRP26992 372 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 CD40LGP29965 261 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 MTNR1BP49286 362 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 INSL3P51460 131 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 PRDX4Q13162 271 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 Q499Y3 187 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 FAM76BQ5HYJ3 339 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 CEP78Q5JTW2 689 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 ZNF529Q6P280 563 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 CD200R1LQ6Q8B3 271 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 BAIAP2L2Q6UXY1 529 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 MOB3CQ70IA8 216 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 CEACAM19Q7Z692 300 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 MS4A15Q8N5U1 240 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 PARP16Q8N5Y8 322 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 CCDC54Q8NEL0 328 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 CSNK2A3Q8NEV1 391 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 IL17DQ8TAD2 202 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 TSEN15Q8WW01 171 aaKnown RBP7.08□□□□□ -1.28
NUP54-211ENST00000512151 PPP1R14BQ96C90 147 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 DERL3Q96Q80 235 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 NABP2Q9BQ15 211 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 RTL8AQ9BWD3 113 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 RNF167Q9H6Y7 350 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 STUB1Q9UNE7 303 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 DHDHQ9UQ10 334 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 HERC1Q15751 4861 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms