RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 ATAD3CQ5T2N8 411 aa8.6□□□□□ -1.03
POLR2J3-213ENST00000508848 C6orf183Q5T699 404 aa8.6□□□□□ -1.03
POLR2J3-213ENST00000508848 TRAPPC6BQ86SZ2 158 aa8.6□□□□□ -1.03
POLR2J3-213ENST00000508848 ABHD12Q8N2K0 398 aa8.6□□□□□ -1.03
POLR2J3-213ENST00000508848 PNKDQ8N490 385 aa8.6□□□□□ -1.03
POLR2J3-213ENST00000508848 LINC00311Q8N616 119 aa8.6□□□□□ -1.03
POLR2J3-213ENST00000508848 TPRX1Q8N7U7 411 aa8.6□□□□□ -1.03
POLR2J3-213ENST00000508848 PLPPR1Q8TBJ4 325 aa8.6□□□□□ -1.03
POLR2J3-213ENST00000508848 KIRREL1Q96J84 757 aa8.6□□□□□ -1.03
POLR2J3-213ENST00000508848 KCTD7Q96MP8 289 aa8.6□□□□□ -1.03
POLR2J3-213ENST00000508848 NEDD4LQ96PU5 975 aa8.6□□□□□ -1.03
POLR2J3-213ENST00000508848 LPAR5Q9H1C0 372 aa8.6□□□□□ -1.03
POLR2J3-213ENST00000508848 BANF2Q9H503 90 aa8.6□□□□□ -1.03
POLR2J3-213ENST00000508848 CALYQ9NYX4 217 aa8.6□□□□□ -1.03
POLR2J3-213ENST00000508848 DPM3Q9P2X0 92 aa8.6□□□□□ -1.03
POLR2J3-213ENST00000508848 MGAT4AQ9UM21 535 aa8.6□□□□□ -1.03
POLR2J3-213ENST00000508848 AK6Q9Y3D8 172 aaKnown RBP8.6□□□□□ -1.03
POLR2J3-213ENST00000508848 BTBD17A6NE02 478 aa8.59□□□□□ -1.03
POLR2J3-213ENST00000508848 FOXI3A8MTJ6 420 aaPredicted RBP8.59□□□□□ -1.03
POLR2J3-213ENST00000508848 NOTOA8MTQ0 251 aa8.59□□□□□ -1.03
POLR2J3-213ENST00000508848 LY6LH3BQJ8 138 aa8.59□□□□□ -1.03
POLR2J3-213ENST00000508848 C15orf65H3BRN8 121 aa8.59□□□□□ -1.03
POLR2J3-213ENST00000508848 MPIG6BO95866 241 aa8.59□□□□□ -1.03
POLR2J3-213ENST00000508848 NAPSAO96009 420 aa8.59□□□□□ -1.03
POLR2J3-213ENST00000508848 CD36P16671 472 aa8.59□□□□□ -1.03
POLR2J3-213ENST00000508848 CEACAM3P40198 252 aa8.59□□□□□ -1.03
POLR2J3-213ENST00000508848 HTD2P86397 168 aa8.59□□□□□ -1.03
POLR2J3-213ENST00000508848 KLRD1Q13241 179 aa8.59□□□□□ -1.03
POLR2J3-213ENST00000508848 ATXN7L3Q14CW9 347 aaPredicted RBP8.59□□□□□ -1.03
POLR2J3-213ENST00000508848 C22orf42Q6IC83 251 aa8.59□□□□□ -1.03
POLR2J3-213ENST00000508848 ZNF880Q6PDB4 577 aa8.59□□□□□ -1.03
POLR2J3-213ENST00000508848 CROCCP3Q8IVE0 287 aa8.59□□□□□ -1.03
POLR2J3-213ENST00000508848 OR51D1Q8NGF3 324 aa8.59□□□□□ -1.03
POLR2J3-213ENST00000508848 OR56B1Q8NGI3 324 aa8.59□□□□□ -1.03
POLR2J3-213ENST00000508848 OR13A1Q8NGR1 328 aa8.59□□□□□ -1.03
POLR2J3-213ENST00000508848 OR9G1Q8NH87 305 aa8.59□□□□□ -1.03
POLR2J3-213ENST00000508848 PIFOQ8TCI5 191 aa8.59□□□□□ -1.03
POLR2J3-213ENST00000508848 NKX3-1Q99801 234 aaPredicted RBP8.59□□□□□ -1.03
POLR2J3-213ENST00000508848 CENPOQ9BU64 300 aa8.59□□□□□ -1.03
POLR2J3-213ENST00000508848 RAB18Q9NP72 206 aa8.59□□□□□ -1.03
POLR2J3-213ENST00000508848 IDI2-AS1Q9NZ38 188 aa8.59□□□□□ -1.03
POLR2J3-213ENST00000508848 VPREB3Q9UKI3 123 aa8.59□□□□□ -1.03
POLR2J3-213ENST00000508848 SOX21Q9Y651 276 aaPredicted RBP8.59□□□□□ -1.03
POLR2J3-213ENST00000508848 SHISA3A0PJX4 238 aa8.58□□□□□ -1.04
POLR2J3-213ENST00000508848 METTL21EPA6NDL7 271 aa8.58□□□□□ -1.04
POLR2J3-213ENST00000508848 LEUTXA8MZ59 168 aa8.58□□□□□ -1.04
POLR2J3-213ENST00000508848 MMP23AO75900 390 aa8.58□□□□□ -1.04
POLR2J3-213ENST00000508848 TSPAN9O75954 239 aa8.58□□□□□ -1.04
POLR2J3-213ENST00000508848 SCGNO76038 276 aa8.58□□□□□ -1.04
POLR2J3-213ENST00000508848 DIRAS3O95661 229 aa8.58□□□□□ -1.04
POLR2J3-213ENST00000508848 ARG1P05089 322 aa8.58□□□□□ -1.04
POLR2J3-213ENST00000508848 BLVRBP30043 206 aaPredicted RBP8.58□□□□□ -1.04
POLR2J3-213ENST00000508848 GLP1RP43220 463 aa8.58□□□□□ -1.04
POLR2J3-213ENST00000508848 ARHGDIBP52566 201 aa8.58□□□□□ -1.04
POLR2J3-213ENST00000508848 TMEM50BP56557 158 aa8.58□□□□□ -1.04
POLR2J3-213ENST00000508848 LOXL3P58215 753 aa8.58□□□□□ -1.04
POLR2J3-213ENST00000508848 P2RY14Q15391 338 aa8.58□□□□□ -1.04
POLR2J3-213ENST00000508848 SRSF7Q16629 238 aaKnown RBP eCLIP8.58□□□□□ -1.04
POLR2J3-213ENST00000508848 LRRC75BQ2VPJ9 315 aa8.58□□□□□ -1.04
POLR2J3-213ENST00000508848 CCDC144NLQ6NUI1 221 aa8.58□□□□□ -1.04
POLR2J3-213ENST00000508848 THNSL2Q86YJ6 484 aa8.58□□□□□ -1.04
POLR2J3-213ENST00000508848 OR4P4Q8NGL7 312 aa8.58□□□□□ -1.04
POLR2J3-213ENST00000508848 GCDHQ92947 438 aaPredicted RBP8.58□□□□□ -1.04
POLR2J3-213ENST00000508848 SSX3Q99909 188 aa8.58□□□□□ -1.04
POLR2J3-213ENST00000508848 GHITMQ9H3K2 345 aa8.58□□□□□ -1.04
POLR2J3-213ENST00000508848 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.58□□□□□ -1.04
POLR2J3-213ENST00000508848 ETAA1Q9NY74 926 aa8.58□□□□□ -1.04
POLR2J3-213ENST00000508848 ZNF581Q9P0T4 197 aa8.58□□□□□ -1.04
POLR2J3-213ENST00000508848 PITPNC1Q9UKF7 332 aa8.58□□□□□ -1.04
POLR2J3-213ENST00000508848 BUB1B-PAK6H3BSN5 160 aa8.57□□□□□ -1.04
POLR2J3-213ENST00000508848 J3QR06 171 aa8.57□□□□□ -1.04
POLR2J3-213ENST00000508848 ITGB1BP1O14713 200 aa8.57□□□□□ -1.04
POLR2J3-213ENST00000508848 SPINT2O43291 252 aa8.57□□□□□ -1.04
POLR2J3-213ENST00000508848 IGHV4-59P01825 116 aa8.57□□□□□ -1.04
POLR2J3-213ENST00000508848 CRYBA1P05813 215 aa8.57□□□□□ -1.04
POLR2J3-213ENST00000508848 ZNF137PP52743 207 aa8.57□□□□□ -1.04
POLR2J3-213ENST00000508848 DLX1P56177 255 aa8.57□□□□□ -1.04
POLR2J3-213ENST00000508848 HLA-DRB5Q30154 266 aa8.57□□□□□ -1.04
POLR2J3-213ENST00000508848 LDLRAD2Q5SZI1 272 aa8.57□□□□□ -1.04
POLR2J3-213ENST00000508848 C11orf88Q6PI97 169 aa8.57□□□□□ -1.04
POLR2J3-213ENST00000508848 ZNF782Q6ZMW2 699 aaPredicted RBP8.57□□□□□ -1.04
POLR2J3-213ENST00000508848 MOB1BQ7L9L4 216 aa8.57□□□□□ -1.04
POLR2J3-213ENST00000508848 C16orf82Q7Z2V1 217 aa8.57□□□□□ -1.04
POLR2J3-213ENST00000508848 NR2C2APQ86WQ0 139 aa8.57□□□□□ -1.04
POLR2J3-213ENST00000508848 PDZD9Q8IXQ8 264 aa8.57□□□□□ -1.04
POLR2J3-213ENST00000508848 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.57□□□□□ -1.04
POLR2J3-213ENST00000508848 OR4F5Q8NH21 305 aa8.57□□□□□ -1.04
POLR2J3-213ENST00000508848 NEK7Q8TDX7 302 aa8.57□□□□□ -1.04
POLR2J3-213ENST00000508848 ARL11Q969Q4 196 aa8.57□□□□□ -1.04
POLR2J3-213ENST00000508848 YIPF6Q96EC8 236 aa8.57□□□□□ -1.04
POLR2J3-213ENST00000508848 OCSTAMPQ9BR26 566 aa8.57□□□□□ -1.04
POLR2J3-213ENST00000508848 FAAP24Q9BTP7 215 aa8.57□□□□□ -1.04
POLR2J3-213ENST00000508848 CHIAQ9BZP6 476 aa8.57□□□□□ -1.04
POLR2J3-213ENST00000508848 C16orf95Q9H693 158 aa8.57□□□□□ -1.04
POLR2J3-213ENST00000508848 PLEKHJ1Q9NW61 149 aa8.57□□□□□ -1.04
POLR2J3-213ENST00000508848 KCNIP1Q9NZI2 227 aa8.57□□□□□ -1.04
POLR2J3-213ENST00000508848 TRAPPC2LQ9UL33 140 aa8.57□□□□□ -1.04
POLR2J3-213ENST00000508848 AMMECR1Q9Y4X0 333 aaPredicted RBP8.57□□□□□ -1.04
POLR2J3-213ENST00000508848 A0A0A6YYH2 397 aa8.56□□□□□ -1.04
POLR2J3-213ENST00000508848 TMEM272A0A1B0GTI8 110 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms