RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 OR6C3Q9NZP0 311 aa11.69□□□□□ -0.54
RNF4-208ENST00000507247 MTFP1Q9UDX5 166 aa11.69□□□□□ -0.54
RNF4-208ENST00000507247 POLR3KQ9Y2Y1 108 aaPredicted RBP11.69□□□□□ -0.54
RNF4-208ENST00000507247 MED13LQ71F56 2210 aa11.69□□□□□ -0.54
RNF4-208ENST00000507247 TRGV10A0A0A0MS01 117 aa11.68□□□□□ -0.54
RNF4-208ENST00000507247 PPIAL4CA0A0B4J2A2 164 aa11.68□□□□□ -0.54
RNF4-208ENST00000507247 A0A1W2PQ09 198 aa11.68□□□□□ -0.54
RNF4-208ENST00000507247 C15orf65H3BRN8 121 aa11.68□□□□□ -0.54
RNF4-208ENST00000507247 PPIAL4GP0DN37 164 aa11.68□□□□□ -0.54
RNF4-208ENST00000507247 SSTR5P35346 364 aa11.68□□□□□ -0.54
RNF4-208ENST00000507247 CBX5P45973 191 aa11.68□□□□□ -0.54
RNF4-208ENST00000507247 DLX6P56179 175 aa11.68□□□□□ -0.54
RNF4-208ENST00000507247 HLA-DRB3P79483 266 aa11.68□□□□□ -0.54
RNF4-208ENST00000507247 HMGN3Q15651 99 aa11.68□□□□□ -0.54
RNF4-208ENST00000507247 BAK1Q16611 211 aa11.68□□□□□ -0.54
RNF4-208ENST00000507247 C11orf91Q3C1V1 193 aa11.68□□□□□ -0.54
RNF4-208ENST00000507247 CD276Q5ZPR3 534 aa11.68□□□□□ -0.54
RNF4-208ENST00000507247 MOB1BQ7L9L4 216 aa11.68□□□□□ -0.54
RNF4-208ENST00000507247 HOGA1Q86XE5 327 aa11.68□□□□□ -0.54
RNF4-208ENST00000507247 GDPD1Q8N9F7 314 aa11.68□□□□□ -0.54
RNF4-208ENST00000507247 TRIM63Q969Q1 353 aa11.68□□□□□ -0.54
RNF4-208ENST00000507247 IFT46Q9NQC8 304 aa11.68□□□□□ -0.54
RNF4-208ENST00000507247 LPAR3Q9UBY5 353 aa11.68□□□□□ -0.54
RNF4-208ENST00000507247 UBE2J1Q9Y385 318 aaPredicted RBP11.68□□□□□ -0.54
RNF4-208ENST00000507247 RBMX2Q9Y388 322 aaKnown RBP11.68□□□□□ -0.54
RNF4-208ENST00000507247 IGHV2-70DA0A0C4DH43 119 aa11.67□□□□□ -0.54
RNF4-208ENST00000507247 POM121CA8CG34 1229 aa11.67□□□□□ -0.54
RNF4-208ENST00000507247 C12orf77C9JDV5 145 aa11.67□□□□□ -0.54
RNF4-208ENST00000507247 ORC5O43913 435 aa11.67□□□□□ -0.54
RNF4-208ENST00000507247 SCTP09683 121 aa11.67□□□□□ -0.54
RNF4-208ENST00000507247 IGHV4-31P0DP07 118 aa11.67□□□□□ -0.54
RNF4-208ENST00000507247 NAT1P18440 290 aa11.67□□□□□ -0.54
RNF4-208ENST00000507247 CD40LGP29965 261 aa11.67□□□□□ -0.54
RNF4-208ENST00000507247 GDNFP39905 211 aa11.67□□□□□ -0.54
RNF4-208ENST00000507247 PPP5CP53041 499 aa11.67□□□□□ -0.54
RNF4-208ENST00000507247 ERVFRD-1P60508 538 aa11.67□□□□□ -0.54
RNF4-208ENST00000507247 SRSF7Q16629 238 aaKnown RBP eCLIP11.67□□□□□ -0.54
RNF4-208ENST00000507247 TMEM249Q2WGJ8 235 aa11.67□□□□□ -0.54
RNF4-208ENST00000507247 C6orf183Q5T699 404 aa11.67□□□□□ -0.54
RNF4-208ENST00000507247 OR52W1Q6IF63 320 aa11.67□□□□□ -0.54
RNF4-208ENST00000507247 Q6ZS49 121 aa11.67□□□□□ -0.54
RNF4-208ENST00000507247 BEST4Q8NFU0 473 aa11.67□□□□□ -0.54
RNF4-208ENST00000507247 OR1L1Q8NH94 360 aa11.67□□□□□ -0.54
RNF4-208ENST00000507247 ZNF714Q96N38 554 aa11.67□□□□□ -0.54
RNF4-208ENST00000507247 THAP7Q9BT49 309 aaPredicted RBP11.67□□□□□ -0.54
RNF4-208ENST00000507247 TAF9BQ9HBM6 251 aa11.67□□□□□ -0.54
RNF4-208ENST00000507247 ZNF286AQ9HBT8 521 aa11.67□□□□□ -0.54
RNF4-208ENST00000507247 TAS2R3Q9NYW6 316 aa11.67□□□□□ -0.54
RNF4-208ENST00000507247 CALYQ9NYX4 217 aa11.67□□□□□ -0.54
RNF4-208ENST00000507247 CELSR1Q9NYQ6 3014 aa11.66□□□□□ -0.54
RNF4-208ENST00000507247 ZNF729A6NN14 1252 aaPredicted RBP11.66□□□□□ -0.54
RNF4-208ENST00000507247 B4DSR2 109 aa11.66□□□□□ -0.54
RNF4-208ENST00000507247 TRDCB7Z8K6 153 aa11.66□□□□□ -0.54
RNF4-208ENST00000507247 SMAD7O15105 426 aaKnown RBP11.66□□□□□ -0.54
RNF4-208ENST00000507247 ENSAO43768 121 aaKnown RBP11.66□□□□□ -0.54
RNF4-208ENST00000507247 RBBP9O75884 186 aa11.66□□□□□ -0.54
RNF4-208ENST00000507247 MMP23AO75900 390 aa11.66□□□□□ -0.54
RNF4-208ENST00000507247 HBZP02008 142 aa11.66□□□□□ -0.54
RNF4-208ENST00000507247 LIPFP07098 398 aa11.66□□□□□ -0.54
RNF4-208ENST00000507247 MSMBP08118 114 aa11.66□□□□□ -0.54
RNF4-208ENST00000507247 GSTT2P0CG29 244 aa11.66□□□□□ -0.54
RNF4-208ENST00000507247 GSTT2BP0CG30 244 aa11.66□□□□□ -0.54
RNF4-208ENST00000507247 ZNF728P0DKX0 622 aa11.66□□□□□ -0.54
RNF4-208ENST00000507247 RCVRNP35243 200 aa11.66□□□□□ -0.54
RNF4-208ENST00000507247 HERPUD1Q15011 391 aa11.66□□□□□ -0.54
RNF4-208ENST00000507247 LYSMD2Q8IV50 215 aa11.66□□□□□ -0.54
RNF4-208ENST00000507247 PRR18Q8N4B5 295 aa11.66□□□□□ -0.54
RNF4-208ENST00000507247 C11orf42Q8N5U0 333 aa11.66□□□□□ -0.54
RNF4-208ENST00000507247 ZNF565Q8N9K5 539 aa11.66□□□□□ -0.54
RNF4-208ENST00000507247 LINC01356Q8N9X3 169 aa11.66□□□□□ -0.54
RNF4-208ENST00000507247 RFESDQ8TAC1 157 aa11.66□□□□□ -0.54
RNF4-208ENST00000507247 ARL11Q969Q4 196 aa11.66□□□□□ -0.54
RNF4-208ENST00000507247 MSI2Q96DH6 328 aaKnown RBP11.66□□□□□ -0.54
RNF4-208ENST00000507247 KCNIP1Q9NZI2 227 aa11.66□□□□□ -0.54
RNF4-208ENST00000507247 OPN4Q9UHM6 478 aa11.66□□□□□ -0.54
RNF4-208ENST00000507247 MGAT4AQ9UM21 535 aa11.66□□□□□ -0.54
RNF4-208ENST00000507247 IGKV1-6A0A0C4DH72 117 aa11.65□□□□□ -0.54
RNF4-208ENST00000507247 KIR2DS1A0A191URI9 304 aa11.65□□□□□ -0.54
RNF4-208ENST00000507247 KBTBD11-OT1A0A1B0GTJ5 212 aa11.65□□□□□ -0.54
RNF4-208ENST00000507247 C17orf98A8MV24 154 aa11.65□□□□□ -0.54
RNF4-208ENST00000507247 NPIPB11E5RHQ5 1161 aa11.65□□□□□ -0.54
RNF4-208ENST00000507247 FABP7O15540 132 aa11.65□□□□□ -0.54
RNF4-208ENST00000507247 IL7P13232 177 aa11.65□□□□□ -0.54
RNF4-208ENST00000507247 GZMHP20718 246 aa11.65□□□□□ -0.54
RNF4-208ENST00000507247 OMGP23515 440 aa11.65□□□□□ -0.54
RNF4-208ENST00000507247 ACTBP60709 375 aa11.65□□□□□ -0.54
RNF4-208ENST00000507247 ACTG1P63261 375 aa11.65□□□□□ -0.54
RNF4-208ENST00000507247 SSBP1Q04837 148 aaKnown RBP11.65□□□□□ -0.54
RNF4-208ENST00000507247 IGSF11Q5DX21 431 aa11.65□□□□□ -0.54
RNF4-208ENST00000507247 PRAMEF5Q5TYX0 476 aa11.65□□□□□ -0.54
RNF4-208ENST00000507247 FAM53AQ6NSI3 398 aaPredicted RBP11.65□□□□□ -0.54
RNF4-208ENST00000507247 TRAT1Q6PIZ9 186 aa11.65□□□□□ -0.54
RNF4-208ENST00000507247 ZNF554Q86TJ5 538 aa11.65□□□□□ -0.54
RNF4-208ENST00000507247 KIRREL1Q96J84 757 aa11.65□□□□□ -0.54
RNF4-208ENST00000507247 CCDC32Q9BV29 185 aa11.65□□□□□ -0.54
RNF4-208ENST00000507247 LINC00574Q9H8X3 128 aa11.65□□□□□ -0.54
RNF4-208ENST00000507247 ONECUT1Q9UBC0 465 aa11.65□□□□□ -0.54
RNF4-208ENST00000507247 ANXA10Q9UJ72 324 aa11.65□□□□□ -0.54
RNF4-208ENST00000507247 INSIG2Q9Y5U4 225 aa11.65□□□□□ -0.54
RNF4-208ENST00000507247 F8P00451 2351 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms