RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 G3V3Y1 287 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 H0Y9J4 135 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 RPL36A-HNRNPH2H7BZ11 118 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 GABRPO00591 440 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 TNFSF11O14788 317 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 SULT1B1O43704 296 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 TRAF3IP2O43734 574 aaPredicted RBP1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 EFNA2O43921 213 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 CXCL13O43927 109 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 UPK3AO75631 287 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 GPX5O75715 221 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 SC5DO75845 299 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 SCGNO76038 276 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 RPP14O95059 124 aaKnown RBP1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 DUSP14O95147 198 aaKnown RBP1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 LY6G6DO95868 133 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 SERPINA5P05154 406 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 CRHP06850 196 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 CST2P09228 141 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 UCHL1P09936 223 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 OR8G3PP0DMU2 310 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 CALCBP10092 127 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 GABRA1P14867 456 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 CTLA4P16410 223 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 ZNF708P17019 499 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 RAB3BP20337 219 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 PTNP21246 168 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 TUBG1P23258 451 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 ARR3P36575 388 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 MAGEA5P43359 124 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 INPP1P49441 399 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 LHX2P50458 406 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 CLDN6P56747 220 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 AP3S2P59780 193 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 MRPS10P82664 201 aaKnown RBP1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 MXD1Q05195 221 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 ARL6IP1Q15041 203 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 SSX1Q16384 188 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 SGCAQ16586 387 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 DEFB109BQ30KR1 87 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 Q499Y3 187 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 TP53I3Q53FA7 332 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 CCDC92Q53HC0 331 aaPredicted RBP1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 PAN3Q58A45 887 aaKnown RBP1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 C10orf128Q5T292 105 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 ZNF684Q5T5D7 378 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 IDNKQ5T6J7 187 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 BCL2L15Q5TBC7 163 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 HACD4Q5VWC8 232 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 CARD17Q5XLA6 110 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 GLT8D1Q68CQ7 371 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 UFSP1Q6NVU6 142 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 XKRXQ6PP77 449 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 DRAM2Q6UX65 266 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 UNQ9370/PRO34162Q6UXP9 181 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 ZNF562Q6V9R5 426 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 PGAP1Q75T13 922 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 ASCL5Q7RTU5 278 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 P4HA3Q7Z4N8 544 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 DCXRQ7Z4W1 244 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 LRRC28Q86X40 367 aaPredicted RBP1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 CDH26Q8IXH8 852 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 C20orf196Q8IYI0 205 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 C1orf174Q8IYL3 243 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 ZNF100Q8IYN0 542 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 UBQLNLQ8IYU4 475 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 UBE2J2Q8N2K1 259 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 KDM8Q8N371 416 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 TMEM251Q8N6I4 163 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 GDPD1Q8N9F7 314 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 SYT14Q8NB59 555 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 C19orf18Q8NEA5 215 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 FDCSPQ8NFU4 85 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 OR56B1Q8NGI3 324 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 OR5L1Q8NGL2 311 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 OR5M1Q8NGP8 315 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 OR6Q1Q8NGQ2 317 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 OR2G2Q8NGZ5 317 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 NDNFQ8TB73 568 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 RPS4Y2Q8TD47 263 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 RNF133Q8WVZ7 376 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 TSEN15Q8WW01 171 aaKnown RBP1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 DEDD2Q8WXF8 326 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 C11orf40Q8WZ69 217 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 RPL3LQ92901 407 aaKnown RBP1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 TMEM54Q969K7 222 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 PTX4Q96A99 478 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 APH1AQ96BI3 265 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 PPP1R14BQ96C90 147 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 SLAMF6Q96DU3 332 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 S100A16Q96FQ6 103 aaKnown RBP1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 DIRAS2Q96HU8 199 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 ZFP3Q96NJ6 502 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 TECTBQ96PL2 329 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 OR2M2Q96R28 347 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 KCNS3Q9BQ31 491 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 ZNF649Q9BS31 505 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 SPXQ9BT56 116 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 EMC6Q9BV81 110 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 TM2D1Q9BX74 207 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms