RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 MEGF9Q9H1U4 602 aa10.62□□□□□ -0.71
TCOF1-209ENST00000506630 ZNF286AQ9HBT8 521 aa10.62□□□□□ -0.71
TCOF1-209ENST00000506630 IDI2-AS1Q9NZ38 188 aa10.62□□□□□ -0.71
TCOF1-209ENST00000506630 VPREB3Q9UKI3 123 aa10.62□□□□□ -0.71
TCOF1-209ENST00000506630 V9GY05 133 aa10.62□□□□□ -0.71
TCOF1-209ENST00000506630 SHISA3A0PJX4 238 aa10.61□□□□□ -0.71
TCOF1-209ENST00000506630 UBE2QL1A1L167 161 aa10.61□□□□□ -0.71
TCOF1-209ENST00000506630 H3BUI4 141 aa10.61□□□□□ -0.71
TCOF1-209ENST00000506630 TOR1AO14656 332 aa10.61□□□□□ -0.71
TCOF1-209ENST00000506630 TNFAIP8O95379 198 aa10.61□□□□□ -0.71
TCOF1-209ENST00000506630 CD37P11049 281 aa10.61□□□□□ -0.71
TCOF1-209ENST00000506630 FUT3P21217 361 aa10.61□□□□□ -0.71
TCOF1-209ENST00000506630 GALP22466 123 aa10.61□□□□□ -0.71
TCOF1-209ENST00000506630 PSMD7P51665 324 aa10.61□□□□□ -0.71
TCOF1-209ENST00000506630 CLDN12P56749 244 aa10.61□□□□□ -0.71
TCOF1-209ENST00000506630 RPS27AP62979 156 aaKnown RBP10.61□□□□□ -0.71
TCOF1-209ENST00000506630 FAM189A2Q15884 450 aa10.61□□□□□ -0.71
TCOF1-209ENST00000506630 SSX2Q16385 188 aa10.61□□□□□ -0.71
TCOF1-209ENST00000506630 LY6EQ16553 131 aa10.61□□□□□ -0.71
TCOF1-209ENST00000506630 HES5Q5TA89 166 aa10.61□□□□□ -0.71
TCOF1-209ENST00000506630 SIGIRRQ6IA17 410 aa10.61□□□□□ -0.71
TCOF1-209ENST00000506630 ZNF497Q6ZNH5 498 aa10.61□□□□□ -0.71
TCOF1-209ENST00000506630 GDPGP1Q6ZNW5 385 aa10.61□□□□□ -0.71
TCOF1-209ENST00000506630 DYNAPQ8N1N2 210 aa10.61□□□□□ -0.71
TCOF1-209ENST00000506630 OR4K15Q8NH41 348 aa10.61□□□□□ -0.71
TCOF1-209ENST00000506630 RFESDQ8TAC1 157 aa10.61□□□□□ -0.71
TCOF1-209ENST00000506630 KIRREL1Q96J84 757 aa10.61□□□□□ -0.71
TCOF1-209ENST00000506630 NEDD4LQ96PU5 975 aa10.61□□□□□ -0.71
TCOF1-209ENST00000506630 NICN1Q9BSH3 213 aa10.61□□□□□ -0.71
TCOF1-209ENST00000506630 ABCB10Q9NRK6 738 aa10.61□□□□□ -0.71
TCOF1-209ENST00000506630 STUB1Q9UNE7 303 aa10.61□□□□□ -0.71
TCOF1-209ENST00000506630 HILPDAQ9Y5L2 63 aa10.61□□□□□ -0.71
TCOF1-209ENST00000506630 MMP24Q9Y5R2 645 aa10.61□□□□□ -0.71
TCOF1-209ENST00000506630 TRAV1-2A0A0B4J238 106 aa10.6□□□□□ -0.71
TCOF1-209ENST00000506630 TMEM14DPA8MWL7 114 aa10.6□□□□□ -0.71
TCOF1-209ENST00000506630 M0QZ24 198 aa10.6□□□□□ -0.71
TCOF1-209ENST00000506630 CGB3P0DN86 165 aa10.6□□□□□ -0.71
TCOF1-209ENST00000506630 CGB7P0DN87 165 aa10.6□□□□□ -0.71
TCOF1-209ENST00000506630 RAB3BP20337 219 aa10.6□□□□□ -0.71
TCOF1-209ENST00000506630 HTR1DP28221 377 aa10.6□□□□□ -0.71
TCOF1-209ENST00000506630 CD34P28906 385 aa10.6□□□□□ -0.71
TCOF1-209ENST00000506630 RANBP1P43487 201 aa10.6□□□□□ -0.71
TCOF1-209ENST00000506630 OR10A3P58181 314 aa10.6□□□□□ -0.71
TCOF1-209ENST00000506630 LDLRAD2Q5SZI1 272 aa10.6□□□□□ -0.71
TCOF1-209ENST00000506630 SYT6Q5T7P8 510 aaPredicted RBP10.6□□□□□ -0.71
TCOF1-209ENST00000506630 MINOS1Q5TGZ0 78 aa10.6□□□□□ -0.71
TCOF1-209ENST00000506630 DHRS7BQ6IAN0 325 aaPredicted RBP10.6□□□□□ -0.71
TCOF1-209ENST00000506630 OR2W3Q7Z3T1 314 aa10.6□□□□□ -0.71
TCOF1-209ENST00000506630 OR51D1Q8NGF3 324 aa10.6□□□□□ -0.71
TCOF1-209ENST00000506630 OR4P4Q8NGL7 312 aa10.6□□□□□ -0.71
TCOF1-209ENST00000506630 UBALD1Q8TB05 177 aa10.6□□□□□ -0.71
TCOF1-209ENST00000506630 ZNF596Q8TC21 504 aa10.6□□□□□ -0.71
TCOF1-209ENST00000506630 ARL11Q969Q4 196 aa10.6□□□□□ -0.71
TCOF1-209ENST00000506630 MALSU1Q96EH3 234 aa10.6□□□□□ -0.71
TCOF1-209ENST00000506630 CYYR1Q96J86 154 aa10.6□□□□□ -0.71
TCOF1-209ENST00000506630 URM1Q9BTM9 101 aaKnown RBP10.6□□□□□ -0.71
TCOF1-209ENST00000506630 TM2D1Q9BX74 207 aa10.6□□□□□ -0.71
TCOF1-209ENST00000506630 BEX1Q9HBH7 125 aa10.6□□□□□ -0.71
TCOF1-209ENST00000506630 TXNL4BQ9NX01 149 aaKnown RBP10.6□□□□□ -0.71
TCOF1-209ENST00000506630 STEAP1Q9UHE8 339 aa10.6□□□□□ -0.71
TCOF1-209ENST00000506630 TRAPPC2LQ9UL33 140 aa10.6□□□□□ -0.71
TCOF1-209ENST00000506630 SSR3Q9UNL2 185 aa10.6□□□□□ -0.71
TCOF1-209ENST00000506630 MINOS1-NBL1R4GNA1 71 aa10.6□□□□□ -0.71
TCOF1-209ENST00000506630 SMIM30A4D0T7 59 aa10.59□□□□□ -0.71
TCOF1-209ENST00000506630 NPIPB11E5RHQ5 1161 aa10.59□□□□□ -0.71
TCOF1-209ENST00000506630 IGHV3-7P01780 117 aa10.59□□□□□ -0.71
TCOF1-209ENST00000506630 MT-ND4P03905 459 aa10.59□□□□□ -0.71
TCOF1-209ENST00000506630 GLAP06280 429 aa10.59□□□□□ -0.71
TCOF1-209ENST00000506630 CHATP28329 748 aa10.59□□□□□ -0.71
TCOF1-209ENST00000506630 BLVRBP30043 206 aaPredicted RBP10.59□□□□□ -0.71
TCOF1-209ENST00000506630 GNG10P50151 68 aa10.59□□□□□ -0.71
TCOF1-209ENST00000506630 RAG2P55895 527 aa10.59□□□□□ -0.71
TCOF1-209ENST00000506630 RPL15P61313 204 aaKnown RBP10.59□□□□□ -0.71
TCOF1-209ENST00000506630 QRFPP83859 136 aa10.59□□□□□ -0.71
TCOF1-209ENST00000506630 AANATQ16613 207 aa10.59□□□□□ -0.71
TCOF1-209ENST00000506630 HLA-DRB5Q30154 266 aa10.59□□□□□ -0.71
TCOF1-209ENST00000506630 UTF1Q5T230 341 aa10.59□□□□□ -0.71
TCOF1-209ENST00000506630 OR9G1Q8NH87 305 aa10.59□□□□□ -0.71
TCOF1-209ENST00000506630 LEAP2Q969E1 77 aa10.59□□□□□ -0.71
TCOF1-209ENST00000506630 FAM3DQ96BQ1 224 aa10.59□□□□□ -0.71
TCOF1-209ENST00000506630 SULT4A1Q9BR01 284 aa10.59□□□□□ -0.71
TCOF1-209ENST00000506630 OR51E2Q9H255 320 aa10.59□□□□□ -0.71
TCOF1-209ENST00000506630 MMP27Q9H306 513 aa10.59□□□□□ -0.71
TCOF1-209ENST00000506630 VCX3AQ9NNX9 186 aa10.59□□□□□ -0.71
TCOF1-209ENST00000506630 C1RLQ9NZP8 487 aa10.59□□□□□ -0.71
TCOF1-209ENST00000506630 A0A087WXM4 84 aa10.58□□□□□ -0.72
TCOF1-209ENST00000506630 A0A087X0M5 115 aa10.58□□□□□ -0.72
TCOF1-209ENST00000506630 A0A0A6YYD4 124 aa10.58□□□□□ -0.72
TCOF1-209ENST00000506630 LOC100506127A0A0U1RQW1 187 aa10.58□□□□□ -0.72
TCOF1-209ENST00000506630 A0A1B0GX30 115 aa10.58□□□□□ -0.72
TCOF1-209ENST00000506630 F2RL2O00254 374 aa10.58□□□□□ -0.72
TCOF1-209ENST00000506630 TIMM23O14925 209 aa10.58□□□□□ -0.72
TCOF1-209ENST00000506630 ORC5O43913 435 aa10.58□□□□□ -0.72
TCOF1-209ENST00000506630 CA11O75493 328 aa10.58□□□□□ -0.72
TCOF1-209ENST00000506630 GZMHP20718 246 aa10.58□□□□□ -0.72
TCOF1-209ENST00000506630 FGF9P31371 208 aaPredicted RBP10.58□□□□□ -0.72
TCOF1-209ENST00000506630 RAB13P51153 203 aa10.58□□□□□ -0.72
TCOF1-209ENST00000506630 PRRX1P54821 245 aa10.58□□□□□ -0.72
TCOF1-209ENST00000506630 RELBQ01201 579 aa10.58□□□□□ -0.72
TCOF1-209ENST00000506630 SRSF4Q08170 494 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms