RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 LZICQ8WZA0 190 aa3.37□□□□□ -1.87
VPS52-222ENST00000495981 SEH1LQ96EE3 360 aa3.37□□□□□ -1.87
VPS52-222ENST00000495981 ZNF799Q96GE5 643 aa3.37□□□□□ -1.87
VPS52-222ENST00000495981 ZNF479Q96JC4 524 aa3.37□□□□□ -1.87
VPS52-222ENST00000495981 C7orf34Q96L11 122 aa3.37□□□□□ -1.87
VPS52-222ENST00000495981 C2orf48Q96LS8 159 aa3.37□□□□□ -1.87
VPS52-222ENST00000495981 MAGEB18Q96M61 343 aa3.37□□□□□ -1.87
VPS52-222ENST00000495981 NMNAT3Q96T66 252 aa3.37□□□□□ -1.87
VPS52-222ENST00000495981 HCAR1Q9BXC0 346 aa3.37□□□□□ -1.87
VPS52-222ENST00000495981 GON7Q9BXV9 100 aa3.37□□□□□ -1.87
VPS52-222ENST00000495981 TRIM15Q9C019 465 aa3.37□□□□□ -1.87
VPS52-222ENST00000495981 VCX2Q9H322 139 aa3.37□□□□□ -1.87
VPS52-222ENST00000495981 FN3KRPQ9HA64 309 aa3.37□□□□□ -1.87
VPS52-222ENST00000495981 BATF3Q9NR55 127 aa3.37□□□□□ -1.87
VPS52-222ENST00000495981 SIRT7Q9NRC8 400 aa3.37□□□□□ -1.87
VPS52-222ENST00000495981 ADA2Q9NZK5 511 aa3.37□□□□□ -1.87
VPS52-222ENST00000495981 ERVK-18Q9QC07 812 aa3.37□□□□□ -1.87
VPS52-222ENST00000495981 RNF7Q9UBF6 113 aa3.37□□□□□ -1.87
VPS52-222ENST00000495981 ABCD2Q9UBJ2 740 aa3.37□□□□□ -1.87
VPS52-222ENST00000495981 KAAG1Q9UBP8 84 aa3.37□□□□□ -1.87
VPS52-222ENST00000495981 ENPP4Q9Y6X5 453 aa3.37□□□□□ -1.87
VPS52-222ENST00000495981 DSCAML1Q8TD84 2053 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 TRAV38-1A0A0B4J264 116 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 ZNF816-ZNF321PA0A0X1KG74 233 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 CXCR6O00574 342 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 BHLHE40O14503 412 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 ACOT8O14734 319 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 SH2D1BO14796 132 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 ARPC3O15145 178 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 SIGLEC5O15389 551 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 SERPINA1P01009 418 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 NPPAP01160 153 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 TFF1P04155 84 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 CRYBA1P05813 215 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 FBP1P09467 338 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 SLC2A1P11166 492 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 NCK1P16333 377 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 GSSP48637 474 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 FHITP49789 147 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 GSK3BP49841 420 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 SLC7A2P52569 658 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 HMGA2P52926 109 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 ARPC4P59998 168 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 LIPEQ05469 1076 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 HERPUD1Q15011 391 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 OR8B8Q15620 311 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 KCNJ8Q15842 424 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 DMRTC1Q5HYR2 192 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 DNM1P34Q6PK57 102 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 SMARCD3Q6STE5 483 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 DRAM2Q6UX65 266 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 DPY19L2P2Q6ZN68 376 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 GDPGP1Q6ZNW5 385 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 Q6ZVQ6 151 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 PGAP1Q75T13 922 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 ARPINQ7Z6K5 226 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 NFE4Q86UQ8 179 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 PDZD9Q8IXQ8 264 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 SLC7A5P1Q8MH63 180 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 LYG1Q8N1E2 194 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 OR5L1Q8NGL2 311 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 OR8D4Q8NGM9 314 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 GATAD1Q8WUU5 269 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 LRRC29Q8WV35 223 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 C12orf43Q96C57 262 aaKnown RBP3.36□□□□□ -1.87
VPS52-222ENST00000495981 GAFA1Q96PS6 74 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 DCTN5Q9BTE1 182 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 OSBPL10Q9BXB5 764 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 NDEL1Q9GZM8 345 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 OR52D1Q9H346 318 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 RERGLQ9H628 205 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 RANBP3Q9H6Z4 567 aaPredicted RBP3.36□□□□□ -1.87
VPS52-222ENST00000495981 ZNF702PQ9H963 129 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 ELL3Q9HB65 397 aaPredicted RBP3.36□□□□□ -1.87
VPS52-222ENST00000495981 S100A14Q9HCY8 104 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 RPRD1BQ9NQG5 326 aaKnown RBP3.36□□□□□ -1.87
VPS52-222ENST00000495981 TMEM100Q9NV29 134 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 FGFR1OP2Q9NVK5 253 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 C1orf123Q9NWV4 160 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 ONECUT1Q9UBC0 465 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 KCNG2Q9UJ96 466 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 ZNF222Q9UK12 451 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 PRPF19Q9UMS4 504 aaKnown RBP3.36□□□□□ -1.87
VPS52-222ENST00000495981 SIGLEC9Q9Y336 463 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 NOP16Q9Y3C1 178 aaKnown RBP3.36□□□□□ -1.87
VPS52-222ENST00000495981 IER3IP1Q9Y5U9 82 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 U3KQK5 164 aa3.36□□□□□ -1.87
VPS52-222ENST00000495981 LINC00854A0A1B0GVQ3 168 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 NKX6-3A6NJ46 265 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 F5H5K5 113 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 H3BUX3 64 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 M0R1W7 72 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 CCSO14618 274 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 ATP8B1O43520 1251 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 GMDSO60547 372 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 DIRAS1O95057 198 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 ECDO95905 644 aaPredicted RBP3.35□□□□□ -1.87
VPS52-222ENST00000495981 RPSAP08865 295 aaKnown RBP3.35□□□□□ -1.87
VPS52-222ENST00000495981 TROVE2P10155 538 aaKnown RBP eCLIP3.35□□□□□ -1.87
VPS52-222ENST00000495981 PAX6P26367 422 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms