RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 HNRNPA1P09651 372 aaKnown RBP eCLIP5.96□□□□□ -1.45
VPS13B-205ENST00000493587 CCL2P13500 99 aa5.96□□□□□ -1.45
VPS13B-205ENST00000493587 PSMB5P28074 263 aa5.96□□□□□ -1.45
VPS13B-205ENST00000493587 SRP14P37108 136 aaKnown RBP5.96□□□□□ -1.45
VPS13B-205ENST00000493587 SLC6A12P48065 614 aa5.96□□□□□ -1.45
VPS13B-205ENST00000493587 CLDN15P56746 228 aa5.96□□□□□ -1.45
VPS13B-205ENST00000493587 PDE7AQ13946 482 aa5.96□□□□□ -1.45
VPS13B-205ENST00000493587 PRSS53Q2L4Q9 553 aa5.96□□□□□ -1.45
VPS13B-205ENST00000493587 TMEM240Q5SV17 173 aa5.96□□□□□ -1.45
VPS13B-205ENST00000493587 KTI12Q96EK9 354 aaPredicted RBP5.96□□□□□ -1.45
VPS13B-205ENST00000493587 NMNAT3Q96T66 252 aa5.96□□□□□ -1.45
VPS13B-205ENST00000493587 GPER1Q99527 375 aa5.96□□□□□ -1.45
VPS13B-205ENST00000493587 CLEC1BQ9P126 229 aa5.96□□□□□ -1.45
VPS13B-205ENST00000493587 TMEM131Q92545 1883 aa5.96□□□□□ -1.46
VPS13B-205ENST00000493587 TNRC6AQ8NDV7 1962 aaKnown RBP5.96□□□□□ -1.46
VPS13B-205ENST00000493587 A0A0G2JMM0 328 aa5.96□□□□□ -1.46
VPS13B-205ENST00000493587 A0A1W2PPB8 328 aa5.96□□□□□ -1.46
VPS13B-205ENST00000493587 C7orf71A4D174 169 aa5.96□□□□□ -1.46
VPS13B-205ENST00000493587 ZNF716A6NP11 495 aa5.96□□□□□ -1.46
VPS13B-205ENST00000493587 KIR3DP1A8MWS1 328 aa5.96□□□□□ -1.46
VPS13B-205ENST00000493587 HMGN2P05204 90 aaKnown RBP5.96□□□□□ -1.46
VPS13B-205ENST00000493587 IGLC1P0CG04 106 aa5.96□□□□□ -1.46
VPS13B-205ENST00000493587 HIST1H1CP16403 213 aaKnown RBP5.96□□□□□ -1.46
VPS13B-205ENST00000493587 ZNF136P52737 540 aa5.96□□□□□ -1.46
VPS13B-205ENST00000493587 B4GALNT1Q00973 533 aa5.96□□□□□ -1.46
VPS13B-205ENST00000493587 PLAURQ03405 335 aa5.96□□□□□ -1.46
VPS13B-205ENST00000493587 MFGE8Q08431 387 aaPredicted RBP5.96□□□□□ -1.46
VPS13B-205ENST00000493587 COL9A2Q14055 689 aaPredicted RBP5.96□□□□□ -1.46
VPS13B-205ENST00000493587 PSG3Q16557 428 aa5.96□□□□□ -1.46
VPS13B-205ENST00000493587 ABCA11PQ4W5N1 156 aa5.96□□□□□ -1.46
VPS13B-205ENST00000493587 TXNDC8Q6A555 127 aa5.96□□□□□ -1.46
VPS13B-205ENST00000493587 ASTLQ6HA08 431 aaPredicted RBP5.96□□□□□ -1.46
VPS13B-205ENST00000493587 LCN12Q6JVE5 192 aa5.96□□□□□ -1.46
VPS13B-205ENST00000493587 IGF2-ASQ6U949 168 aa5.96□□□□□ -1.46
VPS13B-205ENST00000493587 HOGA1Q86XE5 327 aa5.96□□□□□ -1.46
VPS13B-205ENST00000493587 KREMEN2Q8NCW0 462 aa5.96□□□□□ -1.46
VPS13B-205ENST00000493587 OR4A5Q8NH83 315 aa5.96□□□□□ -1.46
VPS13B-205ENST00000493587 PERPQ96FX8 193 aa5.96□□□□□ -1.46
VPS13B-205ENST00000493587 WDYHV1Q96HA8 205 aa5.96□□□□□ -1.46
VPS13B-205ENST00000493587 TSPAN32Q96QS1 320 aa5.96□□□□□ -1.46
VPS13B-205ENST00000493587 UBE2ZQ9H832 354 aaPredicted RBP5.96□□□□□ -1.46
VPS13B-205ENST00000493587 GPR84Q9NQS5 396 aa5.96□□□□□ -1.46
VPS13B-205ENST00000493587 MRPL27Q9P0M9 148 aaKnown RBP5.96□□□□□ -1.46
VPS13B-205ENST00000493587 B3GALT5Q9Y2C3 310 aa5.96□□□□□ -1.46
VPS13B-205ENST00000493587 UFC1Q9Y3C8 167 aa5.96□□□□□ -1.46
VPS13B-205ENST00000493587 KIAA0100Q14667 2235 aaKnown RBP5.96□□□□□ -1.46
VPS13B-205ENST00000493587 MYO15AQ9UKN7 3530 aa5.96□□□□□ -1.46
VPS13B-205ENST00000493587 COL27A1Q8IZC6 1860 aaPredicted RBP5.96□□□□□ -1.46
VPS13B-205ENST00000493587 SHISA8B8ZZ34 492 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 CBLN1P23435 193 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 RRADP55042 308 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 ACKR1Q16570 336 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 SP6Q3SY56 376 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 ALG10Q5BKT4 473 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 TMEM164Q5U3C3 297 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 MUC15Q8N387 334 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 C2orf73Q8N5S3 287 aaPredicted RBP5.95□□□□□ -1.46
VPS13B-205ENST00000493587 FAM174AQ8TBP5 190 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 TMEM230Q96A57 120 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 GNPNAT1Q96EK6 184 aaPredicted RBP5.95□□□□□ -1.46
VPS13B-205ENST00000493587 CALHM2Q9HA72 323 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 SRA1Q9HD15 236 aaKnown RBP5.95□□□□□ -1.46
VPS13B-205ENST00000493587 DAPP1Q9UN19 280 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 GPR132Q9UNW8 380 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 CCL26Q9Y258 94 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 HCFC2Q9Y5Z7 792 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 DMDP11532 3685 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 NKX2-6A6NCS4 301 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 C5orf67F2Z3F1 127 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 H3BUT2 72 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 FCN1O00602 326 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 YPEL1O60688 119 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 CLEC3AO75596 197 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 CELA3AP09093 270 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 FAM87AP0C7U9 286 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 CTSEP14091 401 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 PLPP4Q5VZY2 271 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 ZNF841Q6ZN19 808 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 Q7L0L9 218 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 OR13G1Q8NGZ3 307 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 OR4F5Q8NH21 305 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 FAM131CQ96AQ9 280 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 ANAPC16Q96DE5 110 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 LRRC3BQ96PB8 259 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 TSSK2Q96PF2 358 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 YPEL2Q96QA6 119 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 OR4F4Q96R69 305 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 SERTAD4Q9NUC0 356 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 EML5Q05BV3 1969 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 CNTRLQ7Z7A1 2325 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 MEGF11A6BM72 1044 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 FAM231BA6NCW3 169 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 PRR19A6NJB7 356 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 PLPP3O14495 311 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 EPPINO95925 133 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 C8orf89P0DMQ9 161 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 ACRV1P26436 265 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 FUT6P51993 359 aa5.95□□□□□ -1.46
VPS13B-205ENST00000493587 RPL23P62829 140 aaKnown RBP5.95□□□□□ -1.46
VPS13B-205ENST00000493587 EWSR1Q01844 656 aaKnown RBP eCLIP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms