RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 TPRA1Q86W33 373 aa13.22□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 ABHD12Q8N2K0 398 aa13.22□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 CCDC107Q8WV48 283 aa13.22□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 DYRK2Q92630 601 aa13.22□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 KIRREL1Q96J84 757 aa13.22□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 LINC00574Q9H8X3 128 aa13.22□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 TMEM272A0A1B0GTI8 110 aa13.21□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 SMIM30A4D0T7 59 aa13.21□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 BTBD17A6NE02 478 aa13.21□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 NOTOA8MTQ0 251 aa13.21□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 NPIPB11E5RHQ5 1161 aa13.21□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 LDLRAD4O15165 306 aa13.21□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 GZMHP20718 246 aa13.21□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 NFYBP25208 207 aa13.21□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 BLVRBP30043 206 aaPredicted RBP13.21□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 TIMM50Q3ZCQ8 353 aa13.21□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 MINOS1Q5TGZ0 78 aa13.21□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 C16orf87Q6PH81 154 aa13.21□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 C6orf201Q7Z4U5 140 aa13.21□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 NR2C2APQ86WQ0 139 aa13.21□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 GAPTQ8N292 157 aa13.21□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 OR10A7Q8NGE5 316 aa13.21□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 CYYR1Q96J86 154 aa13.21□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 CHIAQ9BZP6 476 aa13.21□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 MEGF9Q9H1U4 602 aa13.21□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 RNF167Q9H6Y7 350 aa13.21□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 ZNF286AQ9HBT8 521 aa13.21□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 TRAPPC2LQ9UL33 140 aa13.21□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 MINOS1-NBL1R4GNA1 71 aa13.21□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 ATRQ13535 2644 aa13.2□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 A0A087X0M5 115 aa13.2□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 A0A1B0GX30 115 aa13.2□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 LTC4SQ16873 150 aa13.2□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 LRRC75BQ2VPJ9 315 aa13.2□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 C6orf183Q5T699 404 aa13.2□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 FAM89BQ8N5H3 189 aa13.2□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 OR4K15Q8NH41 348 aa13.2□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 RFESDQ8TAC1 157 aa13.2□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 NDNFQ8TB73 568 aa13.2□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 ZNF596Q8TC21 504 aa13.2□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 YIPF6Q96EC8 236 aa13.2□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 MALSU1Q96EH3 234 aa13.2□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 SULT4A1Q9BR01 284 aa13.2□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 CENPOQ9BU64 300 aa13.2□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 LIN7BQ9HAP6 207 aa13.2□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 RAB22AQ9UL26 194 aa13.2□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 A0A0B4J203 849 aa13.19□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 C15orf65H3BRN8 121 aa13.19□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 TOR1AO14656 332 aa13.19□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 SOCS1O15524 211 aa13.19□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 ORC5O43913 435 aa13.19□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 SMIM18P0DKX4 95 aa13.19□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 SLC2A2P11168 524 aaPredicted RBP13.19□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 PAX6P26367 422 aa13.19□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 SDC2P34741 201 aa13.19□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 PLA2G7Q13093 441 aa13.19□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 LDLRAD2Q5SZI1 272 aa13.19□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 TRAT1Q6PIZ9 186 aa13.19□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 GDPGP1Q6ZNW5 385 aa13.19□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 OR4P4Q8NGL7 312 aa13.19□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 OR5R1Q8NH85 324 aa13.19□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 SPATA3Q8NHX4 192 aa13.19□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 ARL11Q969Q4 196 aa13.19□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 SSX3Q99909 188 aa13.19□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 FAAP24Q9BTP7 215 aa13.19□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 RAB9BQ9NP90 201 aa13.19□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 PLEKHJ1Q9NW61 149 aa13.19□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 TMEM89A2RUT3 159 aa13.18□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 FOXI3A8MTJ6 420 aaPredicted RBP13.18□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 H3BUX3 64 aa13.18□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 IGLV1-47P01700 117 aa13.18□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 HKR1P10072 659 aa13.18□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 RAB6AP20340 208 aa13.18□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 HTR1DP28221 377 aa13.18□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 VEGFCP49767 419 aa13.18□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 PRRX1P54821 245 aa13.18□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 SSX2Q16385 188 aa13.18□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 AANATQ16613 207 aa13.18□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 HLA-DRB5Q30154 266 aa13.18□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 UTF1Q5T230 341 aa13.18□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 SFXN4Q6P4A7 337 aa13.18□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 DYNAPQ8N1N2 210 aa13.18□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 OR56B1Q8NGI3 324 aa13.18□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 OR9G1Q8NH87 305 aa13.18□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 UBALD1Q8TB05 177 aa13.18□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 MRPL30Q8TCC3 161 aaKnown RBP13.18□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 GCDHQ92947 438 aaPredicted RBP13.18□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 MBNL3Q9NUK0 354 aaKnown RBP13.18□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 VPREB3Q9UKI3 123 aa13.18□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 HSF4Q9ULV5 492 aa13.18□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 KIAA2026Q5HYC2 2103 aa13.18□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 FAM181BA6NEQ2 426 aa13.17□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 C12orf77C9JDV5 145 aa13.17□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 SPINT2O43291 252 aa13.17□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 AIREO43918 545 aa13.17□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 GPR137BO60478 399 aa13.17□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 CRYBA1P05813 215 aa13.17□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 CLEC2LP0C7M8 214 aa13.17□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 RCC1P18754 421 aaPredicted RBP13.17□□□□□ -0.3
MSH5-SAPCD1-206ENST00000491552 EFNB2P52799 333 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms